CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH61817	Soybean	plastid	90.22	89.6
PGSC0003DMT400074817	Potato	cytosol, peroxisome, plastid	20.39	76.84
KRH18981	Soybean	endoplasmic reticulum, extracellular	1.96	70.0
VIT_04s0008g04970.t01	Wine grape	plastid	69.41	69.12
Os06t0142900-02	Rice	peroxisome, plastid	21.09	67.71
Solyc08g066950.2.1	Tomato	plastid	65.08	65.73
AT5G11380.1	Thale cress	plastid	63.97	65.43
CDX69763	Canola	plastid	63.27	65.09
Bra008967.1-P	Field mustard	plastid	63.13	64.94
EER89177	Sorghum	peroxisome	63.27	62.74
Zm00001d045383_P006	Maize	peroxisome	63.41	60.45
KRH02173	Soybean	plastid	55.73	56.04
KRH20991	Soybean	plastid	56.15	55.76
KRH50940	Soybean	plastid	56.28	54.98
KRH11287	Soybean	peroxisome, plastid	32.68	54.17
KRH45527	Soybean	plastid	53.21	53.36
KRH45528	Soybean	plastid	52.51	52.66
KRH39479	Soybean	plastid	53.07	52.05
KRG99484	Soybean	plastid	51.4	51.54
KRH02914	Soybean	plastid	49.16	48.35
KRH16140	Soybean	mitochondrion, plastid	7.4	40.46
GSMUA_Achr4P17610_001	Banana	extracellular, nucleus	0.14	0.05

Protein Annotations

KEGG:00730+2.2.1.7	KEGG:00900+2.2.1.7	EntrezGene:100793268	Gene3D:3.40.50.920	Gene3D:3.40.50.970	MapMan:9.1.2.2
EMBL:ACUP02003420	InterPro:Dxylulose-5-P_synthase	EnsemblPlantsGene:GLYMA_06G071300	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0008661	GO:GO:0009058	GO:GO:0009987	GO:GO:0016114
GO:GO:0016740	InterPro:IPR009014	UniProt:K7KTK7	ProteinID:KRH52493.1	EnsemblPlants:KRH52494	ProteinID:KRH52494
ProteinID:KRH52494.1	ProteinID:KRH52495.1	HAMAP:MF_00315	PFAM:PF02779	PFAM:PF02780	PFAM:PF13292
PANTHER:PTHR43322	PANTHER:PTHR43322:SF3	MetaCyc:PWY-6891	MetaCyc:PWY-6892	MetaCyc:PWY-7560	SMART:SM00861
SUPFAM:SSF52518	SUPFAM:SSF52922	InterPro:THDP-binding	TIGRFAMs:TIGR00204	InterPro:Transketo_C/PFOR_II	InterPro:Transketolase-like_Pyr-bd
InterPro:Transketolase_C	UniParc:UPI000233A008	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:5451032..5457998

Molecular Weight (calculated)

78270.4 Da

IEP (calculated)

6.542

GRAVY (calculated)

-0.051

Length

716 amino acids

Sequence
(BLAST)

001: MAATTPSSTY PFGTPFHSHT RRLDCSTSTS MFPLHSDLST ISMCPRSASK GLVDRVYAQL DGDDYHREKV PTPILDMVEN PLCLKNLSLK ELKQLAVEIR
101: SDLSSIMSGT QISPKASMAV VELTVAIHHV FNAPVDKILW DVGDQTYAHK ILTGRRSLMT TMRRKNGLSG FTSRFESEYD AFGAGHGCNS ISAGLGMAVA
201: RDIKGRQERV VAVISNWTTM AGQAYEAMSN AGYLDSNMVV ILNDSRHSLL PKIEEGPKTS VNALSSTLSK LQSSKSFRRF REAAKGVTKR IGRGMHELAA
301: KVDEYARGMM GPLGSTLFEE LGLYYIGPVD GHNIEDLICV LQEVASLDSM GPVLVHVITD ENQGDDNSQK SDMSDEQKNE GFVKSDLLDN PVWPQTYGNC
401: FVATLVAEAE KDKDIIVVHA GLTMEPSLEL FQEKFPDRFF DVGMAEQHAV TFASGLACGG LKPFCVIPSS FLQRAYDQVV HDVDQQRIPV RFVITSAGLV
501: GSDGPLRCGA FDINFMSCLP NMIVMAPSDE LELMHMVATA TRINNQPICF RYPRGALVGE GYTIGDGIPI KIGRGRVLVE GKDVAFLGYG SMVQNCLKAH
601: SLLAKLGIEV TVADARFCKP LDIMLLRQLC KHHSFLVTVE EGSIGGFGSH VAQFIAVNGL LDGRIKWRPI VLPDRYIEHA SPNEQLDQAG LSGHHIAATA
701: LSLLGRTREA LLFMCS

Best Arabidopsis Sequence Match ( AT5G11380.1 )
(BLAST)

001: MGSASIGYQF GISARFYGNF NLSSDITVSS LPCKLDVSIK SLFSAPSSTH KEYSNRARVC SLPNTDGYCD EKFETPILDS IETPLQLKNL SVKELKLLAD
101: EIRTELHSVL WKKTQKSMNP SFAAIELTLA LHYVFRAPVD NILWDAVEQT YAHKVLTRRW SAIPSRQNSG ISGVTSRLES EYDSFGTGHG CNSISAGLGL
201: AVARDMKGKR DRVVAVIDNV TITAGQAYEA MSNAGYLDSN MIVILNDSRH SLHPNMEEGS KASISALSSI MSKIQSSKVF RKFRELAKAM TKRIGKGMYE
301: WAAKVDEYAR GMVGPTGSTL FEELGLYYIG PVDGHNIEDL VCVLREVSSL DSMGPVLVHV ITEGNRDAET VKNIMVKDRR TYSDCFVEAL VMEAEKDRDI
401: VVVHAGMEMD PSLLTFQERF PDRFFNVGMA EQHAVTFSAG LSSGGLKPFC IIPSAFLQRA YDQVVHDVDR QRKAVRFVIT SAGLVGSDGP VQCGAFDIAF
501: MSSLPNMIAM APADEDELVN MVATAAYVTD RPVCFRFPRG SIVNMNYLVP TGLPIEIGRG RVLVEGQDVA LLGYGAMVQN CLHAHSLLSK LGLNVTVADA
601: RFCKPLDIKL VRDLCQNHKF LITVEEGCVG GFGSHVAQFI ALDGQLDGNI KWRPIVLPDG YIEEASPREQ LALAGLTGHH IAATALSLLG RTREALLLMS

Arabidopsis Description

DXPS31-D-deoxyxylulose 5-phosphate synthase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LFL9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.