Factsheet for Os06t0142900-02

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid

Predictor Summary:

cytosol 1
plastid 4
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400074817	Potato	cytosol, peroxisome, plastid	54.71	64.21
EER89177	Sorghum	peroxisome	94.17	29.09
Zm00001d045383_P006	Maize	peroxisome	92.83	27.56
GSMUA_Achr5P06150_001	Banana	plastid	74.89	23.52
Bra008967.1-P	Field mustard	plastid	69.96	22.41
CDX69763	Canola	plastid	69.96	22.41
VIT_04s0008g04970.t01	Wine grape	plastid	71.3	22.11
AT5G11380.1	Thale cress	plastid	68.16	21.71
KRH52494	Soybean	plastid	67.71	21.09
KRH61817	Soybean	plastid	67.26	20.8
Solyc08g066950.2.1	Tomato	plastid	65.92	20.73
Os05t0408900-03	Rice	plastid	60.09	18.61
Os07t0190000-01	Rice	plasma membrane, plastid	55.61	17.39

Protein Annotations

KEGG:00730+2.2.1.7	KEGG:00900+2.2.1.7	Gene3D:3.40.50.920	Gene3D:3.40.50.970	MapMan:9.1.2.2	UniProt:A0A0P0WS74
ProteinID:BAS96106.1	InterPro:Dxylulose-5-P_synthase	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0008661	GO:GO:0009058	GO:GO:0009987	GO:GO:0016114	GO:GO:0016740
InterPro:IPR009014	EnsemblPlantsGene:Os06g0142900	EnsemblPlants:Os06t0142900-02	PFAM:PF02779	PFAM:PF02780	PANTHER:PTHR43322
PANTHER:PTHR43322:SF3	SUPFAM:SSF52518	SUPFAM:SSF52922	InterPro:THDP-binding	InterPro:Transketo_C/PFOR_II	InterPro:Transketolase-like_Pyr-bd
InterPro:Transketolase_C	UniParc:UPI0003939BDD	SEG:seg	:	:	:

Description

1-DEOXY-D-XYLULOSE 5-PHOSPHATE SYNTHASE 2Similar to 1-deoxy-D-xylulose 5-phosphate synthase. (Os06t0142900-01);Similar to predicted protein. (Os06t0142900-02)

Coordinates

chr6:-:2251031..2252534

Molecular Weight (calculated)

24078.4 Da

IEP (calculated)

5.029

GRAVY (calculated)

0.267

Length

223 amino acids

Sequence
(BLAST)

001: AITSAGLVGS EGPTNSGPFD ITFMSCLPNM IVMSPSNEDE LIDMVATAAM VEDRPICFRY PKGAIVGTSG TLAYGNPLEI GKGEILAEGK EIAFLGYGDV
101: VQRCLIARSL LFNFGIQATV ANARFCKPLD IDLIRMLCQQ HDFLITVEEG TVGGFGSHVS QFISLDGLLD GKIKWRPIVL PDRYIEHASL TEQLDMAGLT
201: AHHIAATALT LLGRHRDALL LMK

Best Arabidopsis Sequence Match ( AT5G11380.1 )
(BLAST)

001: MGSASIGYQF GISARFYGNF NLSSDITVSS LPCKLDVSIK SLFSAPSSTH KEYSNRARVC SLPNTDGYCD EKFETPILDS IETPLQLKNL SVKELKLLAD
101: EIRTELHSVL WKKTQKSMNP SFAAIELTLA LHYVFRAPVD NILWDAVEQT YAHKVLTRRW SAIPSRQNSG ISGVTSRLES EYDSFGTGHG CNSISAGLGL
201: AVARDMKGKR DRVVAVIDNV TITAGQAYEA MSNAGYLDSN MIVILNDSRH SLHPNMEEGS KASISALSSI MSKIQSSKVF RKFRELAKAM TKRIGKGMYE
301: WAAKVDEYAR GMVGPTGSTL FEELGLYYIG PVDGHNIEDL VCVLREVSSL DSMGPVLVHV ITEGNRDAET VKNIMVKDRR TYSDCFVEAL VMEAEKDRDI
401: VVVHAGMEMD PSLLTFQERF PDRFFNVGMA EQHAVTFSAG LSSGGLKPFC IIPSAFLQRA YDQVVHDVDR QRKAVRFVIT SAGLVGSDGP VQCGAFDIAF
501: MSSLPNMIAM APADEDELVN MVATAAYVTD RPVCFRFPRG SIVNMNYLVP TGLPIEIGRG RVLVEGQDVA LLGYGAMVQN CLHAHSLLSK LGLNVTVADA
601: RFCKPLDIKL VRDLCQNHKF LITVEEGCVG GFGSHVAQFI ALDGQLDGNI KWRPIVLPDG YIEEASPREQ LALAGLTGHH IAATALSLLG RTREALLLMS

Arabidopsis Description

DXPS31-D-deoxyxylulose 5-phosphate synthase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LFL9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.