Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os06t0142900-02 | Rice | peroxisome, plastid | 23.52 | 74.89 |
| EER89177 | Sorghum | peroxisome | 68.45 | 67.31 |
| Zm00001d045383_P006 | Maize | peroxisome | 68.45 | 64.71 |
| GSMUA_Achr10P... | Banana | cytosol | 52.96 | 59.21 |
| GSMUA_Achr4P17600_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 31.97 | 55.64 |
| GSMUA_Achr3P24940_001 | Banana | plastid | 56.76 | 53.88 |
| GSMUA_Achr5P24730_001 | Banana | plastid | 52.54 | 52.76 |
| GSMUA_Achr5P15060_001 | Banana | plastid | 50.99 | 52.39 |
| GSMUA_Achr4P17610_001 | Banana | extracellular, nucleus | 0.0 | 0.0 |
Protein Annotations
| KEGG:00730+2.2.1.7 | KEGG:00900+2.2.1.7 | Gene3D:3.40.50.920 | Gene3D:3.40.50.970 | MapMan:9.1.2.2 | InterPro:Dxylulose-5-P_synthase |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008661 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016114 | GO:GO:0016740 | EnsemblPlantsGene:GSMUA_Achr5G06150_001 | EnsemblPlants:GSMUA_Achr5P06150_001 |
| EnsemblPlants:GSMUA_Achr5T06150_001 | InterPro:IPR009014 | UniProt:M0SW44 | HAMAP:MF_00315 | PFAM:PF02779 | PFAM:PF02780 |
| PFAM:PF13292 | PANTHER:PTHR43322 | PANTHER:PTHR43322:SF3 | SMART:SM00861 | SUPFAM:SSF52518 | SUPFAM:SSF52922 |
| InterPro:THDP-binding | TIGRFAMs:TIGR00204 | InterPro:Transketo_C/PFOR_II | InterPro:Transketolase-like_Pyr-bd | InterPro:Transketolase_C | UniParc:UPI000295025A |
| SEG:seg | : | : | : | : | : |
Description
Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr5G06150_001]
Coordinates
chr5:-:4554735..4561288
Molecular Weight (calculated)
78136.5 Da
IEP (calculated)
6.715
GRAVY (calculated)
-0.042
Length
710 amino acids
Sequence
(BLAST)
(BLAST)
001: MASASSHCPF RHISFLQSES RFQSAESGYF GTPQFLKKST SELIIYQNSV TTYLRKGCRQ VAALPDIGDF FWEKDPTPIL DMVDMPIQLK NLSHKELKQL
101: AGEIRSEISF VMLKTRRPFR ASLAVVELTV ALHHVFHAPM DKILWDDGEQ TYAHKILTGR RSLMHTLKRK DGLSGFTSRA ESEYDAFGAG HGCNSISAGL
201: GMAVARDING KKNRIVTVIS NWTTMAGQVY EAMSNAGYLD SNMIVILNDS RHSLHPKLSE GPKMTINPIS STLSKIQSSR SFRRFREAAK GVTKRIGKTM
301: HELAAKVDEY TRGMIGPLGA TLFEELGLYY IGPVDGHNID DLICVLNEVA SLDSTGPVLV HVITEDEDLE SIQKENSKSC SNSINSNPSR TFNDCLAEAI
401: VAEAERDKEI VVVHAGMGVD PSLKLFQSRF PDRFFDVGMA EQHAITFAAG LSCGGLKPFC IIPSTFLQRG YDQVIQDVDL QRLPVRFAIS SAGLAGSEGP
501: IHSGVFDITF MACLPNMIVM APSDEDELID MVATAACVND RPICFRYPRV AIMGNNGLLH SGMPLEIGKG EMLVEGKHVA LLGYGVMVQN CLKAQSLLAG
601: LGIQVTVASA RFCKPLDIEL IRRLCQEHEF LITVEEGTVG GFGSHVSQFM ALDGLLDGRV KWRPILLPDN YIEQATPREQ LEIAGLTGHH IAATTLSLLG
701: RHREAFLLMR
101: AGEIRSEISF VMLKTRRPFR ASLAVVELTV ALHHVFHAPM DKILWDDGEQ TYAHKILTGR RSLMHTLKRK DGLSGFTSRA ESEYDAFGAG HGCNSISAGL
201: GMAVARDING KKNRIVTVIS NWTTMAGQVY EAMSNAGYLD SNMIVILNDS RHSLHPKLSE GPKMTINPIS STLSKIQSSR SFRRFREAAK GVTKRIGKTM
301: HELAAKVDEY TRGMIGPLGA TLFEELGLYY IGPVDGHNID DLICVLNEVA SLDSTGPVLV HVITEDEDLE SIQKENSKSC SNSINSNPSR TFNDCLAEAI
401: VAEAERDKEI VVVHAGMGVD PSLKLFQSRF PDRFFDVGMA EQHAITFAAG LSCGGLKPFC IIPSTFLQRG YDQVIQDVDL QRLPVRFAIS SAGLAGSEGP
501: IHSGVFDITF MACLPNMIVM APSDEDELID MVATAACVND RPICFRYPRV AIMGNNGLLH SGMPLEIGKG EMLVEGKHVA LLGYGVMVQN CLKAQSLLAG
601: LGIQVTVASA RFCKPLDIEL IRRLCQEHEF LITVEEGTVG GFGSHVSQFM ALDGLLDGRV KWRPILLPDN YIEQATPREQ LEIAGLTGHH IAATTLSLLG
701: RHREAFLLMR
001: MGSASIGYQF GISARFYGNF NLSSDITVSS LPCKLDVSIK SLFSAPSSTH KEYSNRARVC SLPNTDGYCD EKFETPILDS IETPLQLKNL SVKELKLLAD
101: EIRTELHSVL WKKTQKSMNP SFAAIELTLA LHYVFRAPVD NILWDAVEQT YAHKVLTRRW SAIPSRQNSG ISGVTSRLES EYDSFGTGHG CNSISAGLGL
201: AVARDMKGKR DRVVAVIDNV TITAGQAYEA MSNAGYLDSN MIVILNDSRH SLHPNMEEGS KASISALSSI MSKIQSSKVF RKFRELAKAM TKRIGKGMYE
301: WAAKVDEYAR GMVGPTGSTL FEELGLYYIG PVDGHNIEDL VCVLREVSSL DSMGPVLVHV ITEGNRDAET VKNIMVKDRR TYSDCFVEAL VMEAEKDRDI
401: VVVHAGMEMD PSLLTFQERF PDRFFNVGMA EQHAVTFSAG LSSGGLKPFC IIPSAFLQRA YDQVVHDVDR QRKAVRFVIT SAGLVGSDGP VQCGAFDIAF
501: MSSLPNMIAM APADEDELVN MVATAAYVTD RPVCFRFPRG SIVNMNYLVP TGLPIEIGRG RVLVEGQDVA LLGYGAMVQN CLHAHSLLSK LGLNVTVADA
601: RFCKPLDIKL VRDLCQNHKF LITVEEGCVG GFGSHVAQFI ALDGQLDGNI KWRPIVLPDG YIEEASPREQ LALAGLTGHH IAATALSLLG RTREALLLMS
101: EIRTELHSVL WKKTQKSMNP SFAAIELTLA LHYVFRAPVD NILWDAVEQT YAHKVLTRRW SAIPSRQNSG ISGVTSRLES EYDSFGTGHG CNSISAGLGL
201: AVARDMKGKR DRVVAVIDNV TITAGQAYEA MSNAGYLDSN MIVILNDSRH SLHPNMEEGS KASISALSSI MSKIQSSKVF RKFRELAKAM TKRIGKGMYE
301: WAAKVDEYAR GMVGPTGSTL FEELGLYYIG PVDGHNIEDL VCVLREVSSL DSMGPVLVHV ITEGNRDAET VKNIMVKDRR TYSDCFVEAL VMEAEKDRDI
401: VVVHAGMEMD PSLLTFQERF PDRFFNVGMA EQHAVTFSAG LSSGGLKPFC IIPSAFLQRA YDQVVHDVDR QRKAVRFVIT SAGLVGSDGP VQCGAFDIAF
501: MSSLPNMIAM APADEDELVN MVATAAYVTD RPVCFRFPRG SIVNMNYLVP TGLPIEIGRG RVLVEGQDVA LLGYGAMVQN CLHAHSLLSK LGLNVTVADA
601: RFCKPLDIKL VRDLCQNHKF LITVEEGCVG GFGSHVAQFI ALDGQLDGNI KWRPIVLPDG YIEEASPREQ LALAGLTGHH IAATALSLLG RTREALLLMS
Arabidopsis Description
DXPS31-D-deoxyxylulose 5-phosphate synthase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LFL9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.