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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, nucleus

Predictor Summary:
  • nucleus 2
  • plastid 2
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, nucleus
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:plastid
MultiLoc:extracellular
Plant-mPloc:plastid
PProwler:secretory
WoLF PSORT:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr4P17600_001 Banana cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 0.05 0.25
GSMUA_Achr10P... Banana cytosol 0.05 0.16
GSMUA_Achr5P15060_001 Banana plastid 0.05 0.14
GSMUA_Achr5P24730_001 Banana plastid 0.05 0.14
KRH52494 Soybean plastid 0.05 0.14
KRH61817 Soybean plastid 0.05 0.14
GSMUA_Achr3P24940_001 Banana plastid 0.05 0.13
AT5G11380.1 Thale cress plastid 0.0 0.0
Bra008967.1-P Field mustard plastid 0.0 0.0
CDX69763 Canola plastid 0.0 0.0
GSMUA_Achr5P06150_001 Banana plastid 0.0 0.0
PGSC0003DMT400074817 Potato cytosol, peroxisome, plastid 0.0 0.0
Solyc08g066950.2.1 Tomato plastid 0.0 0.0
VIT_04s0008g04970.t01 Wine grape plastid 0.0 0.0
Protein Annotations
KEGG:00730+2.2.1.7KEGG:00900+2.2.1.7Gene3D:3.40.50.970MapMan:9.1.2.2ncoils:CoilInterPro:Dxylulose-5-P_synthase
GO:GO:0003674GO:GO:0003824GO:GO:0006629GO:GO:0008150GO:GO:0008152GO:GO:0008661
GO:GO:0009058GO:GO:0009987GO:GO:0016114GO:GO:0016740EnsemblPlantsGene:GSMUA_Achr4G17610_001EnsemblPlants:GSMUA_Achr4P17610_001
EnsemblPlants:GSMUA_Achr4T17610_001UniProt:M0SPS4PFAM:PF13292ScanProsite:PS00801PANTHER:PTHR43322PANTHER:PTHR43322:SF4
SUPFAM:SSF52518InterPro:THDP-bindingInterPro:Transketolase_NUniParc:UPI000295CD7BSEG:seg:
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G17610_001]
Coordinates
chr4:-:17592926..17600243
Molecular Weight (calculated)
25934.0 Da
IEP (calculated)
6.922
GRAVY (calculated)
-0.010
Length
2220 amino acids
Sequence
(BLAST)
0001: MDGRSVXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0101: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0201: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0301: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0401: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0501: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0601: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0701: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0801: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0901: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
1001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
1101: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
1201: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
1301: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
1401: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
1501: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
1601: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
1701: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
1801: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
1901: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXIDFSGE KPATPLLDTI
2001: NDPIHMKNLS TEDLEQLAAE LRAEIVFSVS QTGGHLSASL GVVELAVALH HAFNSPEDKI IWDVGHQAYP HKILTGRRSR MHTIRQTSGL AGFPKRDESI
2101: HDAFGAGHSS TSISAGLGMA VARDLLGKKN HVVSVIGDGA MTAGQAYEAM NNAGYLDSNL VIVLNDNKQV SLPTATLDGP ATPVGALSKA LTKLQSSTEF
2201: RMLREAAKVT CRMTSHLFFF
Best Arabidopsis Sequence Match ( AT3G21500.1 )
(BLAST)
001: MSYQTQINKF SQMALSVFAF PSYINRNPSL KYLKPSSMSS TKYSKVRATT FSEKGEYYSN RPPTPLLDTI NHPMHMKNLS IKELKVLSDE LRSDVIFNVS
101: KTGGHLGSNL GVVELTVALH YIFNTPHDKI LWDVGHQSYP HKILTGRRGK MKTIRQTNGL SGYTKRRESE HDSFGTGHSS TTLSAGLGMA VGRDLKGMNN
201: SVVSVIGDGA MTAGQAYEAM NNAGYLHSNM IVILNDNKQV SLPTANLDGP TQPVGALSCA LSRLQSNCGM IRETSSTLFE ELGFHYVGPV DGHNIDDLVS
301: ILETLKSTKT IGPVLIHVVT EKGRGYPYAE RADDKYHVLK FDPETGKQFK NISKTQSYTS CFVEALIAEA EADKDIVAIH AAMGGGTMLN LFESRFPTRC
401: FDVGIAEQHA VTFAAGLACE GLKPFCTIYS SFMQRAYDQV VHDVDLQKLP VRFAIDRAGL MGADGPTHCG AFDVTFMACL PNMIVMAPSD EAELFNMVAT
501: AAAIDDRPSC FRYHRGNGIG VSLPPGNKGV PLQIGRGRIL RDGERVALLG YGSAVQRCLE AASMLSERGL KITVADARFC KPLDVALIRS LAKSHEVLIT
601: VEEGSIGGFG SHVVQFLALD GLLDGKLKVY RTWITNGSTS
Arabidopsis Description
DXPS11-deoxy-D-xylulose 5-phosphate synthase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTC7]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.