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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 8
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:mitochondrion
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra008967.1-P Field mustard plastid 84.71 85.2
CDX69763 Canola plastid 83.71 84.2
PGSC0003DMT400074817 Potato cytosol, peroxisome, plastid 20.43 75.26
Os06t0142900-02 Rice peroxisome, plastid 21.71 68.16
Solyc08g066950.2.1 Tomato plastid 66.29 65.44
VIT_04s0008g04970.t01 Wine grape plastid 66.29 64.53
KRH52494 Soybean plastid 65.43 63.97
KRH61817 Soybean plastid 65.29 63.38
EER89177 Sorghum peroxisome 59.71 57.89
Zm00001d045383_P006 Maize peroxisome 59.71 55.66
AT4G15560.1 Thale cress plastid 54.29 53.0
AT3G21500.3 Thale cress plastid 49.71 51.4
GSMUA_Achr4P17610_001 Banana extracellular, nucleus 0.0 0.0
Protein Annotations
KEGG:00730+2.2.1.7KEGG:00900+2.2.1.7Gene3D:3.40.50.920Gene3D:3.40.50.970EntrezGene:831009MapMan:9.1.2.2
ProteinID:AED91669.1ArrayExpress:AT5G11380EnsemblPlantsGene:AT5G11380RefSeq:AT5G11380TAIR:AT5G11380RefSeq:AT5G11380-TAIR-G
EnsemblPlants:AT5G11380.1TAIR:AT5G11380.1Unigene:At.32264ProteinID:CAB96673.1Symbol:DXPS3InterPro:Dxylulose-5-P_synthase
GO:GO:0003674GO:GO:0003824GO:GO:0006629GO:GO:0008150GO:GO:0008152GO:GO:0008661
GO:GO:0009058GO:GO:0009987GO:GO:0016114GO:GO:0016740InterPro:IPR009014RefSeq:NP_196699.1
PFAM:PF02779PFAM:PF02780PFAM:PF13292PO:PO:0000013PO:PO:0000037PO:PO:0000230
PO:PO:0000293PO:PO:0001016PO:PO:0001017PO:PO:0001054PO:PO:0001078PO:PO:0001081
PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103
PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005
PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030
PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030
PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025195PO:PO:0025281
PANTHER:PTHR43322PANTHER:PTHR43322:SF3UniProt:Q9LFL9SMART:SM00861SUPFAM:SSF52518SUPFAM:SSF52922
InterPro:THDP-bindingTIGRFAMs:TIGR00204InterPro:Transketo_C/PFOR_IIInterPro:Transketolase-like_Pyr-bdInterPro:Transketolase_CUniParc:UPI0000048B0C
Description
DXPS31-D-deoxyxylulose 5-phosphate synthase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LFL9]
Coordinates
chr5:+:3629989..3633511
Molecular Weight (calculated)
76646.4 Da
IEP (calculated)
6.510
GRAVY (calculated)
0.001
Length
700 amino acids
Sequence
(BLAST)
001: MGSASIGYQF GISARFYGNF NLSSDITVSS LPCKLDVSIK SLFSAPSSTH KEYSNRARVC SLPNTDGYCD EKFETPILDS IETPLQLKNL SVKELKLLAD
101: EIRTELHSVL WKKTQKSMNP SFAAIELTLA LHYVFRAPVD NILWDAVEQT YAHKVLTRRW SAIPSRQNSG ISGVTSRLES EYDSFGTGHG CNSISAGLGL
201: AVARDMKGKR DRVVAVIDNV TITAGQAYEA MSNAGYLDSN MIVILNDSRH SLHPNMEEGS KASISALSSI MSKIQSSKVF RKFRELAKAM TKRIGKGMYE
301: WAAKVDEYAR GMVGPTGSTL FEELGLYYIG PVDGHNIEDL VCVLREVSSL DSMGPVLVHV ITEGNRDAET VKNIMVKDRR TYSDCFVEAL VMEAEKDRDI
401: VVVHAGMEMD PSLLTFQERF PDRFFNVGMA EQHAVTFSAG LSSGGLKPFC IIPSAFLQRA YDQVVHDVDR QRKAVRFVIT SAGLVGSDGP VQCGAFDIAF
501: MSSLPNMIAM APADEDELVN MVATAAYVTD RPVCFRFPRG SIVNMNYLVP TGLPIEIGRG RVLVEGQDVA LLGYGAMVQN CLHAHSLLSK LGLNVTVADA
601: RFCKPLDIKL VRDLCQNHKF LITVEEGCVG GFGSHVAQFI ALDGQLDGNI KWRPIVLPDG YIEEASPREQ LALAGLTGHH IAATALSLLG RTREALLLMS
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.