Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001832.1-P | Field mustard | peroxisome | 78.58 | 86.08 |
| CDY32433 | Canola | plastid | 84.05 | 79.47 |
| CDY48893 | Canola | plastid | 83.31 | 78.77 |
| GSMUA_Achr10P... | Banana | cytosol | 73.26 | 78.11 |
| AT4G15560.1 | Thale cress | plastid | 82.72 | 78.1 |
| KRH11287 | Soybean | peroxisome, plastid | 46.97 | 73.61 |
| Solyc01g067890.2.1 | Tomato | plastid | 77.84 | 73.3 |
| KRH20991 | Soybean | plastid | 77.84 | 73.09 |
| PGSC0003DMT400058821 | Potato | plastid | 77.55 | 73.02 |
| KRH02173 | Soybean | plastid | 76.22 | 72.47 |
| VIT_05s0020g02130.t01 | Wine grape | plastid | 76.37 | 72.21 |
| Os05t0408900-03 | Rice | plastid | 75.92 | 71.39 |
| KRH50940 | Soybean | plastid | 76.81 | 70.94 |
| TraesCS1A01G255800.1 | Wheat | plastid | 74.59 | 70.93 |
| TraesCS1D01G255100.1 | Wheat | plastid | 74.45 | 70.79 |
| EES19518 | Sorghum | mitochondrion, plastid | 75.48 | 70.78 |
| TraesCS1B01G266500.1 | Wheat | plastid | 74.3 | 70.65 |
| GSMUA_Achr3P24940_001 | Banana | plastid | 76.96 | 69.65 |
| HORVU1Hr1G060610.9 | Barley | mitochondrion, plastid | 74.45 | 69.42 |
| Zm00001d038170_P001 | Maize | plastid | 76.07 | 68.85 |
| KRH16140 | Soybean | mitochondrion, plastid | 10.93 | 56.49 |
| AT5G11380.1 | Thale cress | plastid | 51.4 | 49.71 |
Protein Annotations
| KEGG:00730+2.2.1.7 | KEGG:00900+2.2.1.7 | Gene3D:3.40.50.920 | Gene3D:3.40.50.970 | EntrezGene:821704 | MapMan:9.1.2.2 |
| UniProt:A0A1I9LTC7 | ProteinID:ANM65835.1 | ArrayExpress:AT3G21500 | EnsemblPlantsGene:AT3G21500 | RefSeq:AT3G21500 | TAIR:AT3G21500 |
| RefSeq:AT3G21500-TAIR-G | EnsemblPlants:AT3G21500.3 | Unigene:At.27992 | Symbol:DXPS1 | InterPro:Dxylulose-5-P_synthase | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008661 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016114 | GO:GO:0016740 | InterPro:IPR009014 | HAMAP:MF_00315 | RefSeq:NP_001327775.1 |
| PFAM:PF02779 | PFAM:PF02780 | PFAM:PF13292 | ScanProsite:PS00801 | ScanProsite:PS00802 | PANTHER:PTHR43322 |
| PANTHER:PTHR43322:SF4 | SMART:SM00861 | SUPFAM:SSF52518 | SUPFAM:SSF52922 | InterPro:THDP-binding | InterPro:Transketo_C/PFOR_II |
| InterPro:Transketolase-like_Pyr-bd | InterPro:Transketolase_BS | InterPro:Transketolase_C | InterPro:Transketolase_N | UniParc:UPI000848A91C | SEG:seg |
Description
DXPS11-deoxy-D-xylulose 5-phosphate synthase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTC7]
Coordinates
chr3:-:7573560..7576721
Molecular Weight (calculated)
73755.7 Da
IEP (calculated)
7.496
GRAVY (calculated)
-0.120
Length
677 amino acids
Sequence
(BLAST)
(BLAST)
001: MSYQTQINKF SQMALSVFAF PSYINRNPSL KYLKPSSMSS TKYSKVRATT FSEKGEYYSN RPPTPLLDTI NHPMHMKNLS IKELKVLSDE LRSDVIFNVS
101: KTGGHLGSNL GVVELTVALH YIFNTPHDKI LWDVGHQSYP HKILTGRRGK MKTIRQTNGL SGYTKRRESE HDSFGTGHSS TTLSAGLGMA VGRDLKGMNN
201: SVVSVIGDGA MTAGQAYEAM NNAGYLHSNM IVILNDNKQV SLPTANLDGP TQPVGALSCA LSRLQSNCGM IRETSSTLFE ELGFHYVGPV DGHNIDDLVS
301: ILETLKSTKT IGPVLIHVVT EKGRGYPYAE RADDKYHGVL KFDPETGKQF KNISKTQSYT SCFVEALIAE AEADKDIVAI HAAMGGGTML NLFESRFPTR
401: CFDVGIAEQH AVTFAAGLAC EGLKPFCTIY SSFMQRAYDQ VVHDVDLQKL PVRFAIDRAG LMGADGPTHC GAFDVTFMAC LPNMIVMAPS DEAELFNMVA
501: TAAAIDDRPS CFRYHRGNGI GVSLPPGNKG VPLQIGRGRI LRDGERVALL GYGSAVQRCL EAASMLSERG LKITVADARF CKPLDVALIR SLAKSHEVLI
601: TVEEGSIGGF GSHVVQFLAL DGLLDGKLKW RPMVLPDRYI EHGSPMDQLA EAGLTASHIA ATALNLMGTP REALFWE
101: KTGGHLGSNL GVVELTVALH YIFNTPHDKI LWDVGHQSYP HKILTGRRGK MKTIRQTNGL SGYTKRRESE HDSFGTGHSS TTLSAGLGMA VGRDLKGMNN
201: SVVSVIGDGA MTAGQAYEAM NNAGYLHSNM IVILNDNKQV SLPTANLDGP TQPVGALSCA LSRLQSNCGM IRETSSTLFE ELGFHYVGPV DGHNIDDLVS
301: ILETLKSTKT IGPVLIHVVT EKGRGYPYAE RADDKYHGVL KFDPETGKQF KNISKTQSYT SCFVEALIAE AEADKDIVAI HAAMGGGTML NLFESRFPTR
401: CFDVGIAEQH AVTFAAGLAC EGLKPFCTIY SSFMQRAYDQ VVHDVDLQKL PVRFAIDRAG LMGADGPTHC GAFDVTFMAC LPNMIVMAPS DEAELFNMVA
501: TAAAIDDRPS CFRYHRGNGI GVSLPPGNKG VPLQIGRGRI LRDGERVALL GYGSAVQRCL EAASMLSERG LKITVADARF CKPLDVALIR SLAKSHEVLI
601: TVEEGSIGGF GSHVVQFLAL DGLLDGKLKW RPMVLPDRYI EHGSPMDQLA EAGLTASHIA ATALNLMGTP REALFWE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.