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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 9
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra012779.1-P Field mustard plastid 88.42 92.69
CDX90583 Canola plastid 88.42 92.69
Bra033495.1-P Field mustard plastid 90.66 91.81
CDY09752 Canola plastid 91.77 91.64
CDY64791 Canola plastid 91.49 91.62
GSMUA_Achr10P... Banana cytosol 76.99 86.93
CDY52177 Canola plastid 87.17 85.27
AT3G21500.3 Thale cress plastid 78.1 82.72
VIT_05s0020g02130.t01 Wine grape plastid 82.43 82.54
Solyc01g067890.2.1 Tomato plastid 82.57 82.34
KRH02173 Soybean plastid 81.73 82.3
PGSC0003DMT400058821 Potato plastid 82.15 81.92
KRH20991 Soybean plastid 81.73 81.28
KRH50940 Soybean plastid 82.01 80.22
TraesCS1B01G266500.1 Wheat plastid 78.94 79.49
TraesCS1A01G255800.1 Wheat plastid 78.8 79.35
TraesCS1D01G255100.1 Wheat plastid 78.8 79.35
Os05t0408900-03 Rice plastid 79.64 79.31
EES19518 Sorghum mitochondrion, plastid 78.94 78.39
HORVU1Hr1G060610.9 Barley mitochondrion, plastid 79.22 78.24
GSMUA_Achr3P24940_001 Banana plastid 81.03 77.67
KRH11287 Soybean peroxisome, plastid 46.58 77.31
Zm00001d038170_P001 Maize plastid 80.47 77.14
KRH16140 Soybean mitochondrion, plastid 10.46 57.25
AT5G11380.1 Thale cress plastid 53.0 54.29
Protein Annotations
KEGG:00730+2.2.1.7KEGG:00900+2.2.1.7Gene3D:3.40.50.920Gene3D:3.40.50.970EntrezGene:827230MapMan:9.1.2.2
UniProt:A0A178V5I0ProteinID:AEE83625.1ArrayExpress:AT4G15560EnsemblPlantsGene:AT4G15560RefSeq:AT4G15560TAIR:AT4G15560
RefSeq:AT4G15560-TAIR-GEnsemblPlants:AT4G15560.1TAIR:AT4G15560.1Unigene:At.23240EMBL:BT002340ProteinID:CAB45992.1
ProteinID:CAB78598.1CHEMBL:CHEMBL2285355Symbol:CLA1InterPro:Dxylulose-5-P_synthaseGO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0006629GO:GO:0008150GO:GO:0008152GO:GO:0008299GO:GO:0008661GO:GO:0009058
GO:GO:0009228GO:GO:0009507GO:GO:0009536GO:GO:0009570GO:GO:0009987GO:GO:0015995
GO:GO:0016114GO:GO:0016740GO:GO:0019288GO:GO:0046872GO:GO:0052865InterPro:IPR009014
HAMAP:MF_00315RefSeq:NP_193291.1ProteinID:OAP00232.1PFAM:PF02779PFAM:PF02780PFAM:PF13292
PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000282PO:PO:0000293PO:PO:0001054
PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0005679PO:PO:0007064
PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611
PO:PO:0007616PO:PO:0008019PO:PO:0009001PO:PO:0009005PO:PO:0009006PO:PO:0009009
PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032
PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0009073PO:PO:0020030PO:PO:0020038
PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281ScanProsite:PS00801ScanProsite:PS00802
PANTHER:PTHR43322PANTHER:PTHR43322:SF4UniProt:Q38854SMART:SM00861SUPFAM:SSF52518SUPFAM:SSF52922
InterPro:THDP-bindingTIGRFAMs:TIGR00204InterPro:Transketo_C/PFOR_IIInterPro:Transketolase-like_Pyr-bdInterPro:Transketolase_BSInterPro:Transketolase_C
InterPro:Transketolase_NEMBL:U27099UniParc:UPI000000BD7DEMBL:Y14333SEG:seg:
Description
DXSDXS1 [Source:UniProtKB/TrEMBL;Acc:A0A178V5I0]
Coordinates
chr4:+:8883825..8887667
Molecular Weight (calculated)
76837.3 Da
IEP (calculated)
7.440
GRAVY (calculated)
-0.099
Length
717 amino acids
Sequence
(BLAST)
001: MASSAFAFPS YIITKGGLST DSCKSTSLSS SRSLVTDLPS PCLKPNNNSH SNRRAKVCAS LAEKGEYYSN RPPTPLLDTI NYPIHMKNLS VKELKQLSDE
101: LRSDVIFNVS KTGGHLGSSL GVVELTVALH YIFNTPQDKI LWDVGHQSYP HKILTGRRGK MPTMRQTNGL SGFTKRGESE HDCFGTGHSS TTISAGLGMA
201: VGRDLKGKNN NVVAVIGDGA MTAGQAYEAM NNAGYLDSDM IVILNDNKQV SLPTATLDGP SPPVGALSSA LSRLQSNPAL RELREVAKGM TKQIGGPMHQ
301: LAAKVDEYAR GMISGTGSSL FEELGLYYIG PVDGHNIDDL VAILKEVKST RTTGPVLIHV VTEKGRGYPY AERADDKYHG VVKFDPATGR QFKTTNKTQS
401: YTTYFAEALV AEAEVDKDVV AIHAAMGGGT GLNLFQRRFP TRCFDVGIAE QHAVTFAAGL ACEGLKPFCA IYSSFMQRAY DQVVHDVDLQ KLPVRFAMDR
501: AGLVGADGPT HCGAFDVTFM ACLPNMIVMA PSDEADLFNM VATAVAIDDR PSCFRYPRGN GIGVALPPGN KGVPIEIGKG RILKEGERVA LLGYGSAVQS
601: CLGAAVMLEE RGLNVTVADA RFCKPLDRAL IRSLAKSHEV LITVEEGSIG GFGSHVVQFL ALDGLLDGKL KWRPMVLPDR YIDHGAPADQ LAEAGLMPSH
701: IAATALNLIG APREALF
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.