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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • mitochondrion 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, peroxisome, plastid
BaCelLo:plastid
EpiLoc:plastid
iPSORT:mitochondrion
MultiLoc:peroxisome
Plant-mPloc:plastid
Predotar:plastid
PProwler:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG92439
KRG98682
KRH02173
KRH05426
KRH05459
KRH11287
KRH15534
KRH16140
KRH20991
KRH22690
KRH25207
KRH25208
KRH26622
KRH30442
KRH31637
KRH34359
KRH46251
KRH50940
KRH52197
KRH61504
KRH69065
KRH73804

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G15560.1 KRH22690 AT1G08290.1 24104567
AT4G15560.1 KRH25207 AT1G08290.1 24104567
AT4G15560.1 KRH25208 AT1G08290.1 24104567
AT4G15560.1 KRH26622 AT1G08290.1 24104567
AT4G15560.1 KRH30442 AT1G08290.1 24104567
AT4G15560.1 KRH05426 AT2G26080.1 24104567
AT4G15560.1 KRH05459 AT2G26080.1 24104567
AT4G15560.1 KRH15534 AT2G26080.1 24104567
AT4G15560.1 KRH52197 AT2G26080.1 24104567
AT4G15560.1 KRH61504 AT2G26080.1 24104567
AT4G15560.1 KRG92439 AT3G22970.1 24104567
AT4G15560.1 KRH31637 AT3G22970.1 24104567
AT4G15560.1 KRH34359 AT3G22970.1 24104567
AT4G15560.1 KRH69065 AT3G22970.1 24104567
AT4G15560.1 KRH02173 AT4G15560.1 21798944
AT4G15560.1 KRH11287 AT4G15560.1 21798944
AT4G15560.1 KRH16140 AT4G15560.1 21798944
AT4G15560.1 KRH20991 AT4G15560.1 21798944
AT4G15560.1 KRH50940 AT4G15560.1 21798944
AT4G15560.1 KRG98682 AT4G26780.1 24104567
AT4G15560.1 KRH46251 AT4G26780.1 24104567
AT4G15560.1 KRH73804 AT4G26780.1 24104567
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH50940 Soybean plastid 92.28 89.63
GSMUA_Achr10P... Banana cytosol 79.63 89.29
KRH20991 Soybean plastid 87.08 85.99
Solyc01g067890.2.1 Tomato plastid 85.81 84.98
PGSC0003DMT400058821 Potato plastid 85.81 84.98
Bra001832.1-P Field mustard peroxisome 73.74 84.95
VIT_05s0020g02130.t01 Wine grape plastid 84.55 84.08
Os05t0408900-03 Rice plastid 83.71 82.78
TraesCS1B01G266500.1 Wheat plastid 82.58 82.58
TraesCS1D01G255100.1 Wheat plastid 82.44 82.44
TraesCS1A01G255800.1 Wheat plastid 82.44 82.44
AT4G15560.1 Thale cress plastid 82.3 81.73
KRH11287 Soybean peroxisome, plastid 49.58 81.71
EES19518 Sorghum mitochondrion, plastid 82.44 81.3
HORVU1Hr1G060610.9 Barley mitochondrion, plastid 82.87 81.27
CDY64791 Canola plastid 81.6 81.15
Bra033495.1-P Field mustard plastid 80.48 80.93
CDX90583 Canola plastid 77.67 80.85
CDY09752 Canola plastid 81.46 80.78
Bra012779.1-P Field mustard plastid 77.53 80.7
GSMUA_Achr3P24940_001 Banana plastid 83.29 79.28
Zm00001d038170_P001 Maize plastid 83.01 79.01
CDY32433 Canola plastid 79.21 78.77
CDY48893 Canola plastid 79.07 78.63
CDY52177 Canola plastid 78.65 76.4
AT3G21500.3 Thale cress plastid 72.47 76.22
KRH18981 Soybean endoplasmic reticulum, extracellular 1.97 70.0
KRH45528 Soybean plastid 68.26 68.07
KRH39479 Soybean plastid 69.38 67.67
KRH45527 Soybean plastid 67.56 67.37
KRG99484 Soybean plastid 67.28 67.09
KRH02914 Soybean plastid 65.17 63.74
KRH16140 Soybean mitochondrion, plastid 10.67 58.02
KRH52494 Soybean plastid 56.04 55.73
KRH61817 Soybean plastid 56.32 55.62
Protein Annotations
KEGG:00730+2.2.1.7KEGG:00900+2.2.1.7EntrezGene:100789279Gene3D:3.40.50.920Gene3D:3.40.50.970MapMan:9.1.2.2
EMBL:ACUP02010298InterPro:Dxylulose-5-P_synthaseEnsemblPlantsGene:GLYMA_17G021800GO:GO:0003674GO:GO:0003824GO:GO:0006629
GO:GO:0008150GO:GO:0008152GO:GO:0008661GO:GO:0009058GO:GO:0009987GO:GO:0016114
GO:GO:0016740UniProt:I1MRC8InterPro:IPR009014EnsemblPlants:KRH02173ProteinID:KRH02173ProteinID:KRH02173.1
HAMAP:MF_00315PFAM:PF02779PFAM:PF02780PFAM:PF13292ScanProsite:PS00801ScanProsite:PS00802
PANTHER:PTHR43322PANTHER:PTHR43322:SF4MetaCyc:PWY-6891MetaCyc:PWY-6892MetaCyc:PWY-7560SMART:SM00861
SUPFAM:SSF52518SUPFAM:SSF52922InterPro:THDP-bindingTIGRFAMs:TIGR00204InterPro:Transketo_C/PFOR_IIInterPro:Transketolase-like_Pyr-bd
InterPro:Transketolase_BSInterPro:Transketolase_CInterPro:Transketolase_NUniParc:UPI000233F38DSEG:seg:
Description
hypothetical protein
Coordinates
chr17:+:1591162..1595161
Molecular Weight (calculated)
77094.4 Da
IEP (calculated)
7.869
GRAVY (calculated)
-0.153
Length
712 amino acids
Sequence
(BLAST)
001: MDLSSLSSYR TVGVTPSDPR KSLPQWGLHF LSYTHRLNQI KKRSSGVYAS LSERERGEYY SQRPPTPLLD TVNYPIHMKN LSTNELKQLA DELRSDVIFS
101: VSRTGGHLGS SLGVVELTVA LHYVFNAPQD KILWDVGHQS YPHKILTGRR DKMHTMRQTN GLSGFTKRSE SEFDCFGTGH SSTTISAGLG MAVGRDLKGR
201: KNNVVAVIGD GAMTAGQAYE AMNNAGYLDS DMIVILNDNK QVSLPTATLD GPIPPVGALS SALSRLQSNR PLRELREVAK GVTKRIGGPM HELAAKVDEY
301: ARGMISGSGS SLFEELGLYY IGPVDGHNIN DLVAILNEVK STNTTGPVLI HVITEKGRGY PYAEKAADKY HGVTKFDPPT GKQFKSKATT RSYTTYFAEA
401: LIAEAEADKD VVAIHAAMGG GTGMNLFHRR FPTRCFDVGI AEQHAVTFAA GLACEGLKPF CAIYSSFMQR AYDQVVHDVD LQKLPVRFAM DRAGLVGADG
501: PTHCGSFDVT FMACLPNMVV MAPSDEAELF HMVATAAAIN DRPSCFRYPR GNGIGVQLPT GNKGTPLEIG KGRILIEGER VALLGYGSAV QNCLAAASLV
601: EHHGLRVTVA DARFCKPLDR SLIRSLAKSH EVLITVEEGS IGGFGSHVAQ FMALDGLIDG KLKWRPIVLP DRYIDHGSPA DQLSLAGLTP SHIAATVFNI
701: LGQTREALEV MS
Best Arabidopsis Sequence Match ( AT4G15560.1 )
(BLAST)
001: MASSAFAFPS YIITKGGLST DSCKSTSLSS SRSLVTDLPS PCLKPNNNSH SNRRAKVCAS LAEKGEYYSN RPPTPLLDTI NYPIHMKNLS VKELKQLSDE
101: LRSDVIFNVS KTGGHLGSSL GVVELTVALH YIFNTPQDKI LWDVGHQSYP HKILTGRRGK MPTMRQTNGL SGFTKRGESE HDCFGTGHSS TTISAGLGMA
201: VGRDLKGKNN NVVAVIGDGA MTAGQAYEAM NNAGYLDSDM IVILNDNKQV SLPTATLDGP SPPVGALSSA LSRLQSNPAL RELREVAKGM TKQIGGPMHQ
301: LAAKVDEYAR GMISGTGSSL FEELGLYYIG PVDGHNIDDL VAILKEVKST RTTGPVLIHV VTEKGRGYPY AERADDKYHG VVKFDPATGR QFKTTNKTQS
401: YTTYFAEALV AEAEVDKDVV AIHAAMGGGT GLNLFQRRFP TRCFDVGIAE QHAVTFAAGL ACEGLKPFCA IYSSFMQRAY DQVVHDVDLQ KLPVRFAMDR
501: AGLVGADGPT HCGAFDVTFM ACLPNMIVMA PSDEADLFNM VATAVAIDDR PSCFRYPRGN GIGVALPPGN KGVPIEIGKG RILKEGERVA LLGYGSAVQS
601: CLGAAVMLEE RGLNVTVADA RFCKPLDRAL IRSLAKSHEV LITVEEGSIG GFGSHVVQFL ALDGLLDGKL KWRPMVLPDR YIDHGAPADQ LAEAGLMPSH
701: IAATALNLIG APREALF
Arabidopsis Description
DXSDXS1 [Source:UniProtKB/TrEMBL;Acc:A0A178V5I0]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.