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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid

Predictor Summary:
  • cytosol 1
  • peroxisome 1
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome, plastid
Any Predictor:mitochondrion, peroxisome, plastid
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:mitochondrion
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG92439
KRG98682
KRH02173
KRH05426
KRH05459
KRH11287
KRH15534
KRH16140
KRH20991
KRH22690
KRH25207
KRH25208
KRH26622
KRH30442
KRH31637
KRH34359
KRH46251
KRH50940
KRH52197
KRH61504
KRH69065
KRH73804

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G15560.1 KRH22690 AT1G08290.1 24104567
AT4G15560.1 KRH25207 AT1G08290.1 24104567
AT4G15560.1 KRH25208 AT1G08290.1 24104567
AT4G15560.1 KRH26622 AT1G08290.1 24104567
AT4G15560.1 KRH30442 AT1G08290.1 24104567
AT4G15560.1 KRH05426 AT2G26080.1 24104567
AT4G15560.1 KRH05459 AT2G26080.1 24104567
AT4G15560.1 KRH15534 AT2G26080.1 24104567
AT4G15560.1 KRH52197 AT2G26080.1 24104567
AT4G15560.1 KRH61504 AT2G26080.1 24104567
AT4G15560.1 KRG92439 AT3G22970.1 24104567
AT4G15560.1 KRH31637 AT3G22970.1 24104567
AT4G15560.1 KRH34359 AT3G22970.1 24104567
AT4G15560.1 KRH69065 AT3G22970.1 24104567
AT4G15560.1 KRH02173 AT4G15560.1 21798944
AT4G15560.1 KRH11287 AT4G15560.1 21798944
AT4G15560.1 KRH16140 AT4G15560.1 21798944
AT4G15560.1 KRH20991 AT4G15560.1 21798944
AT4G15560.1 KRH50940 AT4G15560.1 21798944
AT4G15560.1 KRG98682 AT4G26780.1 24104567
AT4G15560.1 KRH46251 AT4G26780.1 24104567
AT4G15560.1 KRH73804 AT4G26780.1 24104567
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH18981 Soybean endoplasmic reticulum, extracellular 3.01 65.0
KRH16140 Soybean mitochondrion, plastid 16.44 54.2
Bra001832.1-P Field mustard peroxisome 77.08 53.88
GSMUA_Achr10P... Banana cytosol 77.55 52.76
KRH20991 Soybean plastid 84.26 50.49
KRH02173 Soybean plastid 81.71 49.58
Solyc01g067890.2.1 Tomato plastid 82.18 49.37
PGSC0003DMT400058821 Potato plastid 81.94 49.24
VIT_05s0020g02130.t01 Wine grape plastid 80.09 48.32
KRH50940 Soybean plastid 81.48 48.02
AT3G21500.3 Thale cress plastid 73.61 46.97
Os05t0408900-03 Rice plastid 78.24 46.94
TraesCS1D01G255100.1 Wheat plastid 77.31 46.91
TraesCS1B01G266500.1 Wheat plastid 77.31 46.91
TraesCS1A01G255800.1 Wheat plastid 77.31 46.91
CDY64791 Canola plastid 77.31 46.65
CDY48893 Canola plastid 77.31 46.65
AT4G15560.1 Thale cress plastid 77.31 46.58
EES19518 Sorghum mitochondrion, plastid 77.55 46.4
CDY32433 Canola plastid 76.85 46.37
CDY09752 Canola plastid 76.85 46.24
Bra033495.1-P Field mustard plastid 75.69 46.19
HORVU1Hr1G060610.9 Barley mitochondrion, plastid 77.08 45.87
GSMUA_Achr3P24940_001 Banana plastid 78.47 45.32
Zm00001d038170_P001 Maize plastid 78.01 45.05
CDX90583 Canola plastid 70.83 44.74
Bra012779.1-P Field mustard plastid 70.6 44.59
CDY52177 Canola plastid 71.53 42.16
KRH45528 Soybean plastid 68.52 41.46
KRH45527 Soybean plastid 67.59 40.9
KRG99484 Soybean plastid 67.36 40.76
KRH39479 Soybean plastid 67.59 40.0
KRH02914 Soybean plastid 64.58 38.32
KRH52494 Soybean plastid 54.17 32.68
KRH61817 Soybean plastid 53.47 32.04
Protein Annotations
KEGG:00730+2.2.1.7KEGG:00900+2.2.1.7Gene3D:3.40.50.920Gene3D:3.40.50.970MapMan:9.1.2.2UniProt:A0A0R0FZL5
EMBL:ACUP02009199InterPro:Dxylulose-5-P_synthaseEnsemblPlantsGene:GLYMA_15G099300GO:GO:0003674GO:GO:0003824GO:GO:0006629
GO:GO:0008150GO:GO:0008152GO:GO:0008661GO:GO:0009058GO:GO:0009987GO:GO:0016114
GO:GO:0016740InterPro:IPR009014EnsemblPlants:KRH11287ProteinID:KRH11287ProteinID:KRH11287.1PFAM:PF02779
PFAM:PF02780PFAM:PF13292PANTHER:PTHR43322PANTHER:PTHR43322:SF4MetaCyc:PWY-6891MetaCyc:PWY-6892
MetaCyc:PWY-7560SMART:SM00861SUPFAM:SSF52518SUPFAM:SSF52922InterPro:THDP-bindingInterPro:Transketo_C/PFOR_II
InterPro:Transketolase-like_Pyr-bdInterPro:Transketolase_CUniParc:UPI00054A76DA:::
Description
hypothetical protein
Coordinates
chr15:-:7723643..7726161
Molecular Weight (calculated)
46477.8 Da
IEP (calculated)
6.125
GRAVY (calculated)
0.018
Length
432 amino acids
Sequence
(BLAST)
001: HAHGMISSSG STLFEELGLY YIGPVDGHNM NDLVAILNEV KNTETTGPCV IHVVTEKGHG YPYAERAAAK YHVVSKFDPA TGEQFKAKAT TKSYSTYFAE
101: ALIAEAEADK DIIGIHAAMG GGTGMNHFLR RFPTRCFDVG IAEQHAVTFA AGLACEGFKP FCAINSSFMQ RAYDQVVHDV DLQKLPVRFG IDRAGLVGPD
201: GCTHCGAFDV TFMACLPNMV VMAPSDEAEL FHMVATAAAI DDRPSCFRYP RGNGVGVELP PGNKGIPLEI GKGRILIEGE RVALLGYGST VQSCVAAATL
301: LGDLGLHATV VNARFCKPLD HSLIRSLAKS HEVLITVEEG SIGGFGSHVA QFMALDGLLD GKLKWRPMVL PDCYIDHGSP ADQLNEARLT PSHIAATVFN
401: LLGQAREELE VMTKEKCKEG VQFSSPEMYK VA
Best Arabidopsis Sequence Match ( AT3G21500.1 )
(BLAST)
001: MSYQTQINKF SQMALSVFAF PSYINRNPSL KYLKPSSMSS TKYSKVRATT FSEKGEYYSN RPPTPLLDTI NHPMHMKNLS IKELKVLSDE LRSDVIFNVS
101: KTGGHLGSNL GVVELTVALH YIFNTPHDKI LWDVGHQSYP HKILTGRRGK MKTIRQTNGL SGYTKRRESE HDSFGTGHSS TTLSAGLGMA VGRDLKGMNN
201: SVVSVIGDGA MTAGQAYEAM NNAGYLHSNM IVILNDNKQV SLPTANLDGP TQPVGALSCA LSRLQSNCGM IRETSSTLFE ELGFHYVGPV DGHNIDDLVS
301: ILETLKSTKT IGPVLIHVVT EKGRGYPYAE RADDKYHVLK FDPETGKQFK NISKTQSYTS CFVEALIAEA EADKDIVAIH AAMGGGTMLN LFESRFPTRC
401: FDVGIAEQHA VTFAAGLACE GLKPFCTIYS SFMQRAYDQV VHDVDLQKLP VRFAIDRAGL MGADGPTHCG AFDVTFMACL PNMIVMAPSD EAELFNMVAT
501: AAAIDDRPSC FRYHRGNGIG VSLPPGNKGV PLQIGRGRIL RDGERVALLG YGSAVQRCLE AASMLSERGL KITVADARFC KPLDVALIRS LAKSHEVLIT
601: VEEGSIGGFG SHVVQFLALD GLLDGKLKVY RTWITNGSTS
Arabidopsis Description
DXPS11-deoxy-D-xylulose 5-phosphate synthase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTC7]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.