Factsheet for Bra001832.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
plastid 2
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48893	Canola	plastid	99.19	85.61
GSMUA_Achr10P...	Banana	cytosol	84.47	82.2
AT3G21500.3	Thale cress	plastid	86.08	78.58
Bra033495.1-P	Field mustard	plastid	89.16	77.82
KRH11287	Soybean	peroxisome, plastid	53.88	77.08
Bra012779.1-P	Field mustard	plastid	84.79	76.61
Solyc01g067890.2.1	Tomato	plastid	86.25	74.13
PGSC0003DMT400058821	Potato	plastid	85.92	73.85
KRH02173	Soybean	plastid	84.95	73.74
VIT_05s0020g02130.t01	Wine grape	plastid	85.28	73.6
KRH20991	Soybean	plastid	85.11	72.95
Os05t0408900-03	Rice	plastid	84.95	72.92
TraesCS1A01G255800.1	Wheat	plastid	83.33	72.33
TraesCS1D01G255100.1	Wheat	plastid	83.33	72.33
TraesCS1B01G266500.1	Wheat	plastid	83.17	72.19
KRH50940	Soybean	plastid	85.11	71.76
EES19518	Sorghum	mitochondrion, plastid	83.5	71.47
HORVU1Hr1G060610.9	Barley	mitochondrion, plastid	83.5	71.07
GSMUA_Achr3P24940_001	Banana	plastid	85.28	70.45
Zm00001d038170_P001	Maize	plastid	84.14	69.52
KRH16140	Soybean	mitochondrion, plastid	12.14	57.25
Bra008967.1-P	Field mustard	plastid	57.12	50.72

Protein Annotations

KEGG:00730+2.2.1.7	KEGG:00900+2.2.1.7	Gene3D:3.40.50.920	Gene3D:3.40.50.970	MapMan:9.1.2.2	EnsemblPlantsGene:Bra001832
EnsemblPlants:Bra001832.1	EnsemblPlants:Bra001832.1-P	InterPro:Dxylulose-5-P_synthase	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0008661	GO:GO:0009058	GO:GO:0009987	GO:GO:0016114
GO:GO:0016740	InterPro:IPR009014	UniProt:M4CCA2	HAMAP:MF_00315	PFAM:PF02779	PFAM:PF02780
PFAM:PF13292	ScanProsite:PS00801	ScanProsite:PS00802	PANTHER:PTHR43322	PANTHER:PTHR43322:SF4	SMART:SM00861
SUPFAM:SSF52518	SUPFAM:SSF52922	InterPro:THDP-binding	TIGRFAMs:TIGR00204	InterPro:Transketo_C/PFOR_II	InterPro:Transketolase-like_Pyr-bd
InterPro:Transketolase_BS	InterPro:Transketolase_C	InterPro:Transketolase_N	UniParc:UPI0002540641	SEG:seg	:

Description

AT4G15560 (E=1e-220) CLA1, DEF, CLA, DXS, DXPS2 | CLA1 (CLOROPLASTOS ALTERADOS 1); 1-deoxy-D-xylulose-5-phosphate synthase

Coordinates

chrA03:-:18737773..18740393

Molecular Weight (calculated)

66477.8 Da

IEP (calculated)

6.826

GRAVY (calculated)

-0.087

Length

618 amino acids

Sequence
(BLAST)

001: MKNLSIKELK ALSDELRSDV IFNVSKTGGH LGSNLGVVEL TVALHYIFNT PQDKILWDVG HQSYPHKILT GRRGKMKTLR QTNGLSGFTQ RGESEHDSFG
101: TGHSSTTISA GLGMAVGRDL KGRDNNVVAV IGDGAMTAGQ AYEAMNNAGY LESDMIVILN DNKQVSLPTA NLDGPTPPVG ALSRALSGMT KKIGGSMHRL
201: ASKVDEYARG MISGAGSTLF EELGFYYIGP VDGHNLDDLV SILKEVKSTR TSGPVLIHVV TEKGHGYPYA ERADDKYHGV VKFDPATGKE FKNIAETKSY
301: TTYFAEALIA EAEEDKDVVA IHAAMGGGTG LNLFQRRFST RCFDVGIAEQ HAVTFAAGLA CEGLKPFCAI YSSFMQRAYD QVVHDVDLQK LPVRFAMDRA
401: GLVGADGPTH CGAFDVTFMA CLPNMIVMAP SDEAELFNMV ATAAAIDDRP SCFRYPRGNG VGVSLPPGNK GVPLEVGKGR ILRDGERVAL LGYGSAVQNC
501: LEASSVLDKR GLKITVADAR FCKPLDIALI RKLAKSHEVL ITVEEGSIGG FGSHVVQFLA LDGLLDGKLK WRPMVLPDRY IEHGSPLDQL AEAGLTASHI
601: AATVLNLIGT PRETLYWK

Best Arabidopsis Sequence Match ( AT4G15560.1 )
(BLAST)

001: MASSAFAFPS YIITKGGLST DSCKSTSLSS SRSLVTDLPS PCLKPNNNSH SNRRAKVCAS LAEKGEYYSN RPPTPLLDTI NYPIHMKNLS VKELKQLSDE
101: LRSDVIFNVS KTGGHLGSSL GVVELTVALH YIFNTPQDKI LWDVGHQSYP HKILTGRRGK MPTMRQTNGL SGFTKRGESE HDCFGTGHSS TTISAGLGMA
201: VGRDLKGKNN NVVAVIGDGA MTAGQAYEAM NNAGYLDSDM IVILNDNKQV SLPTATLDGP SPPVGALSSA LSRLQSNPAL RELREVAKGM TKQIGGPMHQ
301: LAAKVDEYAR GMISGTGSSL FEELGLYYIG PVDGHNIDDL VAILKEVKST RTTGPVLIHV VTEKGRGYPY AERADDKYHG VVKFDPATGR QFKTTNKTQS
401: YTTYFAEALV AEAEVDKDVV AIHAAMGGGT GLNLFQRRFP TRCFDVGIAE QHAVTFAAGL ACEGLKPFCA IYSSFMQRAY DQVVHDVDLQ KLPVRFAMDR
501: AGLVGADGPT HCGAFDVTFM ACLPNMIVMA PSDEADLFNM VATAVAIDDR PSCFRYPRGN GIGVALPPGN KGVPIEIGKG RILKEGERVA LLGYGSAVQS
601: CLGAAVMLEE RGLNVTVADA RFCKPLDRAL IRSLAKSHEV LITVEEGSIG GFGSHVVQFL ALDGLLDGKL KWRPMVLPDR YIDHGAPADQ LAEAGLMPSH
701: IAATALNLIG APREALF

Arabidopsis Description

DXSDXS1 [Source:UniProtKB/TrEMBL;Acc:A0A178V5I0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.