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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, plastid
iPSORT:plastid
MultiLoc:mitochondrion
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:cytosol
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G255800.1
TraesCS1A01G276800.1
TraesCS1B01G266500.1
TraesCS1B01G285900.1
TraesCS1D01G255100.1
TraesCS1D01G276200.1
TraesCS3A01G250200.1
TraesCS3A01G371700.1
TraesCS3B01G279700.1
TraesCS3B01G404000.1
TraesCS3D01G250600.1
TraesCS3D01G364800.1
TraesCS4A01G025500.1
TraesCS4B01G278500.1
TraesCS4D01G277000.1
TraesCS5A01G176600.3
TraesCS5A01G439200.1
TraesCS5B01G173300.1
TraesCS5B01G442200.1
TraesCS5D01G180300.1
TraesCS5D01G446400.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G15560.1 TraesCS1A01G276800.1 AT1G08290.1 24104567
AT4G15560.1 TraesCS1B01G285900.1 AT1G08290.1 24104567
AT4G15560.1 TraesCS1D01G276200.1 AT1G08290.1 24104567
AT4G15560.1 TraesCS3A01G371700.1 AT1G08290.1 24104567
AT4G15560.1 TraesCS3B01G404000.1 AT1G08290.1 24104567
AT4G15560.1 TraesCS3D01G364800.1 AT1G08290.1 24104567
AT4G15560.1 TraesCS3A01G250200.1 AT2G26080.1 24104567
AT4G15560.1 TraesCS3B01G279700.1 AT2G26080.1 24104567
AT4G15560.1 TraesCS3D01G250600.1 AT2G26080.1 24104567
AT4G15560.1 TraesCS4A01G025500.1 AT3G22970.1 24104567
AT4G15560.1 TraesCS4B01G278500.1 AT3G22970.1 24104567
AT4G15560.1 TraesCS4D01G277000.1 AT3G22970.1 24104567
AT4G15560.1 TraesCS5A01G439200.1 AT3G22970.1 24104567
AT4G15560.1 TraesCS5B01G442200.1 AT3G22970.1 24104567
AT4G15560.1 TraesCS5D01G446400.1 AT3G22970.1 24104567
AT4G15560.1 TraesCS1A01G255800.1 AT4G15560.1 21798944
AT4G15560.1 TraesCS1B01G266500.1 AT4G15560.1 21798944
AT4G15560.1 TraesCS1D01G255100.1 AT4G15560.1 21798944
AT4G15560.1 TraesCS5A01G176600.3 AT4G26780.1 24104567
AT4G15560.1 TraesCS5B01G173300.1 AT4G26780.1 24104567
AT4G15560.1 TraesCS5D01G180300.1 AT4G26780.1 24104567
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G255100.1 Wheat plastid 99.3 99.3
TraesCS1A01G255800.1 Wheat plastid 99.3 99.3
HORVU1Hr1G060610.9 Barley mitochondrion, plastid 93.12 91.32
Os05t0408900-03 Rice plastid 89.89 88.89
EES19518 Sorghum mitochondrion, plastid 88.62 87.4
GSMUA_Achr10P... Banana cytosol 77.39 86.77
Zm00001d038170_P001 Maize plastid 88.06 83.82
Bra001832.1-P Field mustard peroxisome 72.19 83.17
KRH02173 Soybean plastid 82.58 82.58
Solyc01g067890.2.1 Tomato plastid 81.88 81.08
PGSC0003DMT400058821 Potato plastid 81.6 80.81
VIT_05s0020g02130.t01 Wine grape plastid 80.9 80.45
KRH20991 Soybean plastid 81.18 80.17
KRH50940 Soybean plastid 81.74 79.4
AT4G15560.1 Thale cress plastid 79.49 78.94
CDX90583 Canola plastid 75.42 78.51
GSMUA_Achr3P24940_001 Banana plastid 82.44 78.48
Bra033495.1-P Field mustard plastid 77.95 78.39
CDY64791 Canola plastid 78.79 78.35
Bra012779.1-P Field mustard plastid 75.14 78.22
CDY09752 Canola plastid 78.65 77.99
CDY48893 Canola plastid 77.95 77.51
CDY32433 Canola plastid 77.95 77.51
KRH11287 Soybean peroxisome, plastid 46.91 77.31
AT3G21500.3 Thale cress plastid 70.65 74.3
CDY52177 Canola plastid 75.7 73.53
TraesCS2B01G626400.2 Wheat plastid 68.4 64.59
TraesCS1B01G411100.1 Wheat mitochondrion 68.26 62.39
KRH16140 Soybean mitochondrion, plastid 10.25 55.73
Protein Annotations
KEGG:00730+2.2.1.7KEGG:00900+2.2.1.7Gene3D:3.40.50.920Gene3D:3.40.50.970MapMan:9.1.2.2InterPro:Dxylulose-5-P_synthase
GO:GO:0003674GO:GO:0003824GO:GO:0006629GO:GO:0008150GO:GO:0008152GO:GO:0008661
GO:GO:0009058GO:GO:0009987GO:GO:0016114GO:GO:0016740InterPro:IPR009014HAMAP:MF_00315
PFAM:PF02779PFAM:PF02780PFAM:PF13292ScanProsite:PS00801ScanProsite:PS00802PANTHER:PTHR43322
PANTHER:PTHR43322:SF4SMART:SM00861SUPFAM:SSF52518SUPFAM:SSF52922InterPro:THDP-bindingTIGRFAMs:TIGR00204
EnsemblPlantsGene:TraesCS1B01G266500EnsemblPlants:TraesCS1B01G266500.1InterPro:Transketo_C/PFOR_IIInterPro:Transketolase-like_Pyr-bdInterPro:Transketolase_BSInterPro:Transketolase_C
InterPro:Transketolase_NTIGR:cd02007TIGR:cd07033SEG:seg::
Description
No Description!
Coordinates
chr1B:-:468509870..468513584
Molecular Weight (calculated)
76536.0 Da
IEP (calculated)
7.173
GRAVY (calculated)
-0.066
Length
712 amino acids
Sequence
(BLAST)
001: MALSSTFSLP RGFLGVLPQE HHFAPAVELQ AKPLKTPRRR SSGISASLSE REAEYHSQRP PTPLLDTVNY PIHMKNLSLK ELQQLSDELR SDVIFHVSKT
101: GGHLGSSLGV VELTVALHYV FNTPQDKLLW DVGHQSYPHK ILTGRRDKMP TMRQTNGLSG FVKRSESEYD SFGTGHSSTT ISAALGMAVG RDLKGAKNNV
201: VAVIGDGAMT AGQAYEAMNN AGYLDSDMIV ILNDNKQVSL PTATLDGPAP PVGALSGALS KLQSSRPLRE LREVAKGVTK QIGGSVHEIA AKVDEYARGM
301: ISGSGSSLFE ELGLYYIGPV DGHNIDDLIT ILREVKGTKT TGPVLIHVIT EKGRGYPYAE RASDKYHGVA KFDPATGRQF KVPAKTLSYT NYFAEALIAE
401: AEQDSKIVAI HAAMGGGTGL NYFLRRFPNR CFDVGIAEQH AVTFAAGLAC EGLKPFCAIY SSFLQRGYDQ VVHDVDLQKL PVRFAMDRAG LVGADGPTHC
501: GAFDVAFMAC LPNMVVMAPS DEAELLNMVA TAAAIDDRPS CFRYPRGNGI GVPLPENYKG TAIEVGKGRI MIEGERVALL GYGSAVQYCM AASSIVAHHG
601: LRVTVADARF CKPLDHALIR SLAKSHEVII TVEEGSIGGF GSHVAQFMAL DGLLDGKLKW RPVVLPDKYI DHGSPADQLV EAGLTPSHIA ATVFNILGQA
701: REALAIMTVQ NA
Best Arabidopsis Sequence Match ( AT4G15560.1 )
(BLAST)
001: MASSAFAFPS YIITKGGLST DSCKSTSLSS SRSLVTDLPS PCLKPNNNSH SNRRAKVCAS LAEKGEYYSN RPPTPLLDTI NYPIHMKNLS VKELKQLSDE
101: LRSDVIFNVS KTGGHLGSSL GVVELTVALH YIFNTPQDKI LWDVGHQSYP HKILTGRRGK MPTMRQTNGL SGFTKRGESE HDCFGTGHSS TTISAGLGMA
201: VGRDLKGKNN NVVAVIGDGA MTAGQAYEAM NNAGYLDSDM IVILNDNKQV SLPTATLDGP SPPVGALSSA LSRLQSNPAL RELREVAKGM TKQIGGPMHQ
301: LAAKVDEYAR GMISGTGSSL FEELGLYYIG PVDGHNIDDL VAILKEVKST RTTGPVLIHV VTEKGRGYPY AERADDKYHG VVKFDPATGR QFKTTNKTQS
401: YTTYFAEALV AEAEVDKDVV AIHAAMGGGT GLNLFQRRFP TRCFDVGIAE QHAVTFAAGL ACEGLKPFCA IYSSFMQRAY DQVVHDVDLQ KLPVRFAMDR
501: AGLVGADGPT HCGAFDVTFM ACLPNMIVMA PSDEADLFNM VATAVAIDDR PSCFRYPRGN GIGVALPPGN KGVPIEIGKG RILKEGERVA LLGYGSAVQS
601: CLGAAVMLEE RGLNVTVADA RFCKPLDRAL IRSLAKSHEV LITVEEGSIG GFGSHVVQFL ALDGLLDGKL KWRPMVLPDR YIDHGAPADQ LAEAGLMPSH
701: IAATALNLIG APREALF
Arabidopsis Description
DXSDXS1 [Source:UniProtKB/TrEMBL;Acc:A0A178V5I0]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.