Factsheet for TraesCS1B01G411100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G392500.1	Wheat	plastid	86.26	94.25
TraesCS1A01G384300.1	Wheat	plastid	86.26	94.25
HORVU1Hr1G084900.9	Barley	plastid	83.57	91.43
Os07t0190000-01	Rice	plasma membrane, plastid	78.43	85.69
TraesCS2B01G626400.2	Wheat	plastid	82.67	85.41
EER96005	Sorghum	plastid	77.92	83.15
Zm00001d019060_P001	Maize	plastid	77.41	82.94
GSMUA_Achr5P15060_001	Banana	plastid	71.76	80.9
GSMUA_Achr4P17600_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	42.36	80.88
GSMUA_Achr5P24730_001	Banana	plastid	71.89	79.21
KRH45527	Soybean	plastid	71.63	78.15
KRH45528	Soybean	plastid	70.86	77.31
KRG99484	Soybean	plastid	70.86	77.31
VIT_00s0218g00110.t01	Wine grape	plastid	70.86	76.88
Solyc11g010850.1.1	Tomato	plastid	70.35	76.75
OQU88632	Sorghum	endoplasmic reticulum, vacuole	63.67	76.54
PGSC0003DMT400041591	Potato	plastid	70.73	76.53
KRH39479	Soybean	plastid	69.06	73.7
TraesCS1B01G266500.1	Wheat	plastid	62.39	68.26

Protein Annotations

KEGG:00730+2.2.1.7	KEGG:00900+2.2.1.7	Gene3D:3.40.50.920	Gene3D:3.40.50.970	MapMan:9.1.2.2	InterPro:Dxylulose-5-P_synthase
GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0008661
GO:GO:0009058	GO:GO:0009987	GO:GO:0016114	GO:GO:0016740	InterPro:IPR009014	HAMAP:MF_00315
PFAM:PF02779	PFAM:PF02780	PFAM:PF13292	ScanProsite:PS00801	ScanProsite:PS00802	PANTHER:PTHR43322
PANTHER:PTHR43322:SF4	SMART:SM00861	SUPFAM:SSF52518	SUPFAM:SSF52922	InterPro:THDP-binding	TIGRFAMs:TIGR00204
EnsemblPlantsGene:TraesCS1B01G411100	EnsemblPlants:TraesCS1B01G411100.1	InterPro:Transketo_C/PFOR_II	InterPro:Transketolase-like_Pyr-bd	InterPro:Transketolase_BS	InterPro:Transketolase_C
InterPro:Transketolase_N	TIGR:cd02007	TIGR:cd07033	SEG:seg	:	:

Description

No Description!

Coordinates

chr1B:+:637592544..637595267

Molecular Weight (calculated)

83325.3 Da

IEP (calculated)

7.466

GRAVY (calculated)

-0.044

Length

779 amino acids

Sequence
(BLAST)

001: METYLAGLYS RKQRMHCLYL IGSSYRVSPH LLLPPVASTG RNSSLQAATS SCAVCVHVHV RCLSSPMALQ ASLPSAFHAA PAITHASCRR QFQLRASAAA
101: AASSAGAGDG KVVMGKQPAT GAWKIDYSGE KPATPLLDTI NYPVHMKNLS TTDLEQLSAE LRAEIVNTVS KTGGHLSSSL GVVELTVALH HVFDTPEDKI
201: IWDVGHQSYP HKILTGRRSR MHTIRKTSGL AGFPKRDESV HDAFGAGHSS TSISAALGMA VARDLQGKQN HVISVIGDGA MTAGQAYEAM NNSGYLDSNM
301: IVVLNDNKQV SLPTATLDGP AKPVGALSKA LTKLQSSTKL RRLREAAKTV TKQIGGTTHE VAAKVDEYAR GMMSAPGSSL FEELGLYYIG PVDGHNLEDL
401: VTIFEKIKSM PASGPVLIHI VTEKGKGYPP AEAAADKMHG VVKFDPTTGK QFKTKSPTLS YTQYFAESLI REAEVDDKVV AIHAAMGGGT GLNYFQKQFP
501: ERCFDVGIAE QHAVTFAAGL AAEGMKPFCA IYSSFLQRGY DQVVHDVDLQ RLPVRFALDR AGLVGADGPT HCGAFDVTYM ACLPNMVVMA PADEAELMHM
601: VATASAIDDR PSCFRFPRGN GVGAVLPLDN RGTPIQVGKG RVLVGGNRVA LLGYGTMVQA CLKAAELLKE HGVFITVADA RFCKPLDTEL IRDLAAEHEI
701: LITAEEGSIG GFGSHVAHYL SLSGLLDGPL KLRSMFLPDR YIDHGAAEDQ MEEAGLTPRH IAATVLSLLD RPLEALHIK

Best Arabidopsis Sequence Match ( AT3G21500.1 )
(BLAST)

001: MSYQTQINKF SQMALSVFAF PSYINRNPSL KYLKPSSMSS TKYSKVRATT FSEKGEYYSN RPPTPLLDTI NHPMHMKNLS IKELKVLSDE LRSDVIFNVS
101: KTGGHLGSNL GVVELTVALH YIFNTPHDKI LWDVGHQSYP HKILTGRRGK MKTIRQTNGL SGYTKRRESE HDSFGTGHSS TTLSAGLGMA VGRDLKGMNN
201: SVVSVIGDGA MTAGQAYEAM NNAGYLHSNM IVILNDNKQV SLPTANLDGP TQPVGALSCA LSRLQSNCGM IRETSSTLFE ELGFHYVGPV DGHNIDDLVS
301: ILETLKSTKT IGPVLIHVVT EKGRGYPYAE RADDKYHVLK FDPETGKQFK NISKTQSYTS CFVEALIAEA EADKDIVAIH AAMGGGTMLN LFESRFPTRC
401: FDVGIAEQHA VTFAAGLACE GLKPFCTIYS SFMQRAYDQV VHDVDLQKLP VRFAIDRAGL MGADGPTHCG AFDVTFMACL PNMIVMAPSD EAELFNMVAT
501: AAAIDDRPSC FRYHRGNGIG VSLPPGNKGV PLQIGRGRIL RDGERVALLG YGSAVQRCLE AASMLSERGL KITVADARFC KPLDVALIRS LAKSHEVLIT
601: VEEGSIGGFG SHVVQFLALD GLLDGKLKVY RTWITNGSTS

Arabidopsis Description

DXPS11-deoxy-D-xylulose 5-phosphate synthase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTC7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.