Factsheet for HORVU1Hr1G084900.9

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G392500.1	Wheat	plastid	94.66	94.53
TraesCS1A01G384300.1	Wheat	plastid	94.24	94.11
Os07t0190000-01	Rice	plasma membrane, plastid	88.48	88.36
HORVU2Hr1G126150.4	Barley	plastid	91.71	85.92
EER96005	Sorghum	plastid	87.64	85.48
Zm00001d019060_P001	Maize	plastid	86.8	85.01
TraesCS1B01G411100.1	Wheat	mitochondrion	91.43	83.57
GSMUA_Achr4P17600_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	46.49	81.13
GSMUA_Achr5P15060_001	Banana	plastid	78.23	80.61
GSMUA_Achr5P24730_001	Banana	plastid	78.51	79.07
KRH45527	Soybean	plastid	78.23	78.01
KRH45528	Soybean	plastid	77.81	77.59
OQU88632	Sorghum	endoplasmic reticulum, vacuole	70.37	77.31
KRG99484	Soybean	plastid	77.53	77.31
VIT_00s0218g00110.t01	Wine grape	plastid	77.67	77.02
PGSC0003DMT400041591	Potato	plastid	77.53	76.67
Solyc11g010850.1.1	Tomato	plastid	76.83	76.61
KRH39479	Soybean	plastid	76.69	74.79
HORVU1Hr1G060610.9	Barley	mitochondrion, plastid	68.26	66.94

Protein Annotations

KEGG:00730+2.2.1.7	KEGG:00900+2.2.1.7	Gene3D:3.40.50.920	Gene3D:3.40.50.970	MapMan:9.1.2.2	UniProt:A0A287GK40
ncoils:Coil	InterPro:Dxylulose-5-P_synthase	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0008661	GO:GO:0009058	GO:GO:0009987	GO:GO:0016114	GO:GO:0016740
EnsemblPlantsGene:HORVU1Hr1G084900	EnsemblPlants:HORVU1Hr1G084900.9	InterPro:IPR009014	HAMAP:MF_00315	PFAM:PF02779	PFAM:PF02780
PFAM:PF13292	ScanProsite:PS00801	ScanProsite:PS00802	PANTHER:PTHR43322	PANTHER:PTHR43322:SF4	SMART:SM00861
SUPFAM:SSF52518	SUPFAM:SSF52922	InterPro:THDP-binding	TIGRFAMs:TIGR00204	InterPro:Transketo_C/PFOR_II	InterPro:Transketolase-like_Pyr-bd
InterPro:Transketolase_BS	InterPro:Transketolase_C	InterPro:Transketolase_N	UniParc:UPI000B463198	SEG:seg	:

Description

No Description!

Coordinates

chrchr1H:-:534540795..534543244

Molecular Weight (calculated)

76214.6 Da

IEP (calculated)

7.257

GRAVY (calculated)

-0.084

Length

712 amino acids

Sequence
(BLAST)

001: MALQASVPSA FHTAPAIAHA SCRRQLQFQL RASAASSPGA GDGKVAMRKE PATGAWKIDY SSEKPATPLL DTINHPVHMK NLSTTDLEQL AAELRVEIVH
101: TVSKTGGHLS SSLGVVELSV ALHHVFDTPE DKIIWDVGHQ SYPHKILTGR RSRMHTIRKT SGLAGFPKRD ESAHDAFGAG HSSTSISAAL GMAVARDLQG
201: KKNHVISVIG DGAMTAGQAY EAMNNSGYLD SNMIVVLNDN KQVSLPTATL DGPSKPVGAL SKALTTLQSS TKFRRLREAA KNVTKQIGGS THEVAAKVDE
301: YARGMMSAPG STLFEELGLY YIGPVDGHSL EDLVTIFEKV KSMPATGPVL IHIVTEKGKG YPPAEAAADK MHGVVKFDPT TGKQFKTKSP TLSYTQYFAE
401: SLIREAEVDD KVVAIHAAMG GGTGLNYFQK RFPERCFDVG IAEQHAVTFA AGLAAEGMKP FCAIYSSFLQ RGYDQVVHDV DLQRLPVRFA LDRAGLVGAD
501: GPTHCGAFDV TYMACLPNMV VMAPADEAEL MHMVATASAI DDRPSCFRFP RGNGVGAVLP LNNRGTPMQV GKGRVLVGGN RVALLGYGTM VQACLKAAEA
601: LKEHGVFITV ADARFCKPLD TELIRDLAAE HEILVTVEEG SIGGFGSHVA HYLSLSGLLD GPLKLRSMFL PDRYIDHGAA EDQMEEAGLT PRHIAATVLS
701: LLGRPLEALH IK

Best Arabidopsis Sequence Match ( AT3G21500.1 )
(BLAST)

001: MSYQTQINKF SQMALSVFAF PSYINRNPSL KYLKPSSMSS TKYSKVRATT FSEKGEYYSN RPPTPLLDTI NHPMHMKNLS IKELKVLSDE LRSDVIFNVS
101: KTGGHLGSNL GVVELTVALH YIFNTPHDKI LWDVGHQSYP HKILTGRRGK MKTIRQTNGL SGYTKRRESE HDSFGTGHSS TTLSAGLGMA VGRDLKGMNN
201: SVVSVIGDGA MTAGQAYEAM NNAGYLHSNM IVILNDNKQV SLPTANLDGP TQPVGALSCA LSRLQSNCGM IRETSSTLFE ELGFHYVGPV DGHNIDDLVS
301: ILETLKSTKT IGPVLIHVVT EKGRGYPYAE RADDKYHVLK FDPETGKQFK NISKTQSYTS CFVEALIAEA EADKDIVAIH AAMGGGTMLN LFESRFPTRC
401: FDVGIAEQHA VTFAAGLACE GLKPFCTIYS SFMQRAYDQV VHDVDLQKLP VRFAIDRAGL MGADGPTHCG AFDVTFMACL PNMIVMAPSD EAELFNMVAT
501: AAAIDDRPSC FRYHRGNGIG VSLPPGNKGV PLQIGRGRIL RDGERVALLG YGSAVQRCLE AASMLSERGL KITVADARFC KPLDVALIRS LAKSHEVLIT
601: VEEGSIGGFG SHVVQFLALD GLLDGKLKVY RTWITNGSTS

Arabidopsis Description

DXPS11-deoxy-D-xylulose 5-phosphate synthase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTC7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.