Factsheet for Zm00001d019060_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	mitochondrion
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96005	Sorghum	plastid	93.95	93.56
Os07t0190000-01	Rice	plasma membrane, plastid	86.52	88.22
TraesCS1A01G384300.1	Wheat	plastid	85.42	87.1
HORVU1Hr1G084900.9	Barley	plastid	85.01	86.8
TraesCS2D01G575800.1	Wheat	plastid	85.01	86.68
TraesCS1D01G392500.1	Wheat	plastid	84.59	86.26
TraesCS2A01G565400.1	Wheat	plastid	84.32	85.02
OQU88632	Sorghum	endoplasmic reticulum, vacuole	72.76	81.64
TraesCS2B01G626400.2	Wheat	plastid	84.59	81.56
GSMUA_Achr4P17600_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	45.39	80.88
HORVU2Hr1G126150.4	Barley	plastid	84.46	80.79
GSMUA_Achr5P24730_001	Banana	plastid	78.13	80.34
GSMUA_Achr5P15060_001	Banana	plastid	75.65	79.59
KRH45527	Soybean	plastid	76.75	78.15
KRH45528	Soybean	plastid	76.2	77.59
TraesCS1B01G411100.1	Wheat	mitochondrion	82.94	77.41
VIT_00s0218g00110.t01	Wine grape	plastid	76.07	77.02
PGSC0003DMT400041591	Potato	plastid	76.07	76.81
KRG99484	Soybean	plastid	75.38	76.75
Solyc11g010850.1.1	Tomato	plastid	75.24	76.61
KRH39479	Soybean	plastid	75.24	74.93
Zm00001d038170_P001	Maize	plastid	70.29	68.32
Zm00001d045383_P006	Maize	peroxisome	48.14	46.6

Protein Annotations

KEGG:00730+2.2.1.7	KEGG:00900+2.2.1.7	Gene3D:3.40.50.920	Gene3D:3.40.50.970	EntrezGene:606430	MapMan:9.1.2.2
UniProt:A0A1D6HUR1	InterPro:Dxylulose-5-P_synthase	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0008661	GO:GO:0009058	GO:GO:0009987	GO:GO:0016114	GO:GO:0016740
InterPro:IPR009014	HAMAP:MF_00315	ProteinID:ONM52041.1	PFAM:PF02779	PFAM:PF02780	PFAM:PF13292
ScanProsite:PS00801	ScanProsite:PS00802	PANTHER:PTHR43322	PANTHER:PTHR43322:SF4	SMART:SM00861	SUPFAM:SSF52518
SUPFAM:SSF52922	InterPro:THDP-binding	TIGRFAMs:TIGR00204	InterPro:Transketo_C/PFOR_II	InterPro:Transketolase-like_Pyr-bd	InterPro:Transketolase_BS
InterPro:Transketolase_C	InterPro:Transketolase_N	UniParc:UPI00022095F0	EnsemblPlantsGene:Zm00001d019060	EnsemblPlants:Zm00001d019060_P001	EnsemblPlants:Zm00001d019060_T001
SEG:seg	:	:	:	:	:

Description

deoxy xylulose synthase 2 deoxy xylulose synthase 2

Coordinates

chr7:+:14494700..14497925

Molecular Weight (calculated)

77217.8 Da

IEP (calculated)

7.187

GRAVY (calculated)

-0.031

Length

727 amino acids

Sequence
(BLAST)

001: MSPIMALQAS SSSPSAFRAV PATANASCRR QFQVRAQVAG GSSSSSIGAD GGKMMVSKEP AAAATSSGPW KIDFSGEKPP TPLLDTVNYP LHMKNLSILE
101: LEQLAAELRA EVVHTVSKTG GHLSSSLGVV ELSVALHHVF DTPEDKIIWD VGHQAYPHKI LTGRRSRMHT IRQTSGLAGF PKRDESAHDA FGVGHSSTSI
201: SAALGMAVAR DLLGRKNHVI SVIGDGAMTA GQAYEAMNNS GYLDANMIVV LNDNKQVSLP TATLDGPSKP VGALSRALTK LQSSTKFRRL REAAKSVTKQ
301: IGGPTHEVAA KVDEYARGMI SASGSSLFEE LGLYYIGPVD GHCVEDLVTI FEKVKSMPAP GPVLIHIVTE KGKGYPPAEA AADRMHGVVK FEPATGRQLK
401: SKSPTLSYTQ YFAESLIREA ESDEKVVAIH AAMGGGTGLN YFQKRFPERC FDVGIAEQHA VTFAAGLAAE GLKPFCAIYS SFLQRGYDQV VHDVDLQRLP
501: VRFALDRAGL VGADGPTHCG AFDVAYMACL PNMVVMAPAD EAELMHMVAT AAAIDDRPSC FRFPRGNGVG AALPPGNKGV ALEVGRGRVL VGGGTRVALL
601: GYGAMVQACL KAAEALKEHD VYVTVADARF CKPLDTALIR ELAAEHEVLI TAEEGSIGGF GSHVAHYLSL TGLLDGPLKL RSMFLPDRYI DHGAPQDQIE
701: EAGLTPRHIA ATVLSLLGRP LEAMQLK

Best Arabidopsis Sequence Match ( AT4G15560.1 )
(BLAST)

001: MASSAFAFPS YIITKGGLST DSCKSTSLSS SRSLVTDLPS PCLKPNNNSH SNRRAKVCAS LAEKGEYYSN RPPTPLLDTI NYPIHMKNLS VKELKQLSDE
101: LRSDVIFNVS KTGGHLGSSL GVVELTVALH YIFNTPQDKI LWDVGHQSYP HKILTGRRGK MPTMRQTNGL SGFTKRGESE HDCFGTGHSS TTISAGLGMA
201: VGRDLKGKNN NVVAVIGDGA MTAGQAYEAM NNAGYLDSDM IVILNDNKQV SLPTATLDGP SPPVGALSSA LSRLQSNPAL RELREVAKGM TKQIGGPMHQ
301: LAAKVDEYAR GMISGTGSSL FEELGLYYIG PVDGHNIDDL VAILKEVKST RTTGPVLIHV VTEKGRGYPY AERADDKYHG VVKFDPATGR QFKTTNKTQS
401: YTTYFAEALV AEAEVDKDVV AIHAAMGGGT GLNLFQRRFP TRCFDVGIAE QHAVTFAAGL ACEGLKPFCA IYSSFMQRAY DQVVHDVDLQ KLPVRFAMDR
501: AGLVGADGPT HCGAFDVTFM ACLPNMIVMA PSDEADLFNM VATAVAIDDR PSCFRYPRGN GIGVALPPGN KGVPIEIGKG RILKEGERVA LLGYGSAVQS
601: CLGAAVMLEE RGLNVTVADA RFCKPLDRAL IRSLAKSHEV LITVEEGSIG GFGSHVVQFL ALDGLLDGKL KWRPMVLPDR YIDHGAPADQ LAEAGLMPSH
701: IAATALNLIG APREALF

Arabidopsis Description

DXSDXS1 [Source:UniProtKB/TrEMBL;Acc:A0A178V5I0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.