Factsheet for TraesCS2A01G565400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G575800.1	Wheat	plastid	97.23	98.32
TraesCS2B01G626400.2	Wheat	plastid	96.67	92.44
TraesCS1A01G384300.1	Wheat	plastid	91.4	92.43
HORVU2Hr1G126150.4	Barley	plastid	96.12	91.18
Os07t0190000-01	Rice	plasma membrane, plastid	85.71	86.68
EER96005	Sorghum	plastid	85.58	84.52
Zm00001d019060_P001	Maize	plastid	85.02	84.32
GSMUA_Achr4P17600_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	45.49	80.39
GSMUA_Achr5P15060_001	Banana	plastid	76.42	79.74
GSMUA_Achr5P24730_001	Banana	plastid	77.81	79.35
KRH45528	Soybean	plastid	77.25	78.01
KRH45527	Soybean	plastid	77.25	78.01
Solyc11g010850.1.1	Tomato	plastid	77.12	77.87
OQU88632	Sorghum	endoplasmic reticulum, vacuole	69.63	77.47
VIT_00s0218g00110.t01	Wine grape	plastid	77.12	77.44
PGSC0003DMT400041591	Potato	plastid	77.25	77.36
KRG99484	Soybean	plastid	76.56	77.31
KRH39479	Soybean	plastid	75.73	74.79
TraesCS1A01G255800.1	Wheat	plastid	67.55	68.4

Protein Annotations

KEGG:00730+2.2.1.7	KEGG:00900+2.2.1.7	Gene3D:3.40.50.920	Gene3D:3.40.50.970	MapMan:9.1.2.2	ncoils:Coil
InterPro:Dxylulose-5-P_synthase	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0008661	GO:GO:0009058	GO:GO:0009987	GO:GO:0016114	GO:GO:0016740	InterPro:IPR009014
HAMAP:MF_00315	PFAM:PF02779	PFAM:PF02780	PFAM:PF13292	ScanProsite:PS00801	ScanProsite:PS00802
PANTHER:PTHR43322	PANTHER:PTHR43322:SF4	SMART:SM00861	SUPFAM:SSF52518	SUPFAM:SSF52922	InterPro:THDP-binding
TIGRFAMs:TIGR00204	EnsemblPlantsGene:TraesCS2A01G565400	EnsemblPlants:TraesCS2A01G565400.1	InterPro:Transketo_C/PFOR_II	InterPro:Transketolase-like_Pyr-bd	InterPro:Transketolase_BS
InterPro:Transketolase_C	InterPro:Transketolase_N	TIGR:cd02007	TIGR:cd07033	SEG:seg	:

Description

No Description!

Coordinates

chr2A:+:765016186..765018791

Molecular Weight (calculated)

77164.9 Da

IEP (calculated)

7.242

GRAVY (calculated)

-0.061

Length

721 amino acids

Sequence
(BLAST)

001: MLVHGVSPMA LQASLPSTFL AAPTIAHASC PRQFKLRASA AAAASSASAG DGKVVTRKEP TTGAWKIEYS SEKPETPLLD TINYPVHMKN LSTTDLEQLS
101: AELRAEIVHT VSKTGGHLSA SLGVVELSVA LHHVFDTPED KIIWDVGHQA YPHKILTGRR SRMHTMRKTS GLAGFPKRDE SAHDAFGVGH SSTSISAALG
201: MAVARDLQGK KNHVISVIGD GAMTAGQAYE AMNNSGFLDS NMIVVLNDNK QVSLPTATLD GPSKPVGALS KALTKLQSST KFRRLREAAK TITKQIGGST
301: HEVAAKVDEY ARGMISASGS TLFEELGLYY IGPVDGHSLE DLVTIFEKVK SMPAPGPVLI HIVTEKGKGY PPAEAAADKM HGVVKFDPTT GKQFKTKSPT
401: LSYTQYFAES LIREAEGDDK VVAIHAAMGG GTGLNYFQKR FPERCFDVGI AEQHAVTFAA GLAAEGMKPF CAIYSSFLQR GYDQVVHDVD LQRLPVRFAM
501: DRAGLVGADG PTHCGAFDVT YMACLPNMVV MAPADEAELM HMVATANAID DRPSCFRFPR GNGIGAVLPL NNRGTPIQVG KGRVLVSGNR VALLGYGTMV
601: QACLKAAEAL KEHDLFITVV DARFCKPLDT ELIRELAAEH EILITAEEGS IGGFGSHVAH YLSLNGLLDG PLKLRSMFLP DRYIDHGAAE DQMEAAGLTP
701: RHIAATVLSL VGRPLEALHL K

Best Arabidopsis Sequence Match ( AT5G11380.1 )
(BLAST)

001: MGSASIGYQF GISARFYGNF NLSSDITVSS LPCKLDVSIK SLFSAPSSTH KEYSNRARVC SLPNTDGYCD EKFETPILDS IETPLQLKNL SVKELKLLAD
101: EIRTELHSVL WKKTQKSMNP SFAAIELTLA LHYVFRAPVD NILWDAVEQT YAHKVLTRRW SAIPSRQNSG ISGVTSRLES EYDSFGTGHG CNSISAGLGL
201: AVARDMKGKR DRVVAVIDNV TITAGQAYEA MSNAGYLDSN MIVILNDSRH SLHPNMEEGS KASISALSSI MSKIQSSKVF RKFRELAKAM TKRIGKGMYE
301: WAAKVDEYAR GMVGPTGSTL FEELGLYYIG PVDGHNIEDL VCVLREVSSL DSMGPVLVHV ITEGNRDAET VKNIMVKDRR TYSDCFVEAL VMEAEKDRDI
401: VVVHAGMEMD PSLLTFQERF PDRFFNVGMA EQHAVTFSAG LSSGGLKPFC IIPSAFLQRA YDQVVHDVDR QRKAVRFVIT SAGLVGSDGP VQCGAFDIAF
501: MSSLPNMIAM APADEDELVN MVATAAYVTD RPVCFRFPRG SIVNMNYLVP TGLPIEIGRG RVLVEGQDVA LLGYGAMVQN CLHAHSLLSK LGLNVTVADA
601: RFCKPLDIKL VRDLCQNHKF LITVEEGCVG GFGSHVAQFI ALDGQLDGNI KWRPIVLPDG YIEEASPREQ LALAGLTGHH IAATALSLLG RTREALLLMS

Arabidopsis Description

DXPS31-D-deoxyxylulose 5-phosphate synthase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LFL9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.