Factsheet for TraesCS1A01G384300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G392500.1	Wheat	plastid	97.05	97.05
HORVU1Hr1G084900.9	Barley	plastid	94.11	94.24
TraesCS2A01G565400.1	Wheat	plastid	92.43	91.4
Os07t0190000-01	Rice	plasma membrane, plastid	87.66	87.66
TraesCS1B01G411100.1	Wheat	mitochondrion	94.25	86.26
EER96005	Sorghum	plastid	87.66	85.62
Zm00001d019060_P001	Maize	plastid	87.1	85.42
GSMUA_Achr4P17600_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	46.42	81.13
GSMUA_Achr5P15060_001	Banana	plastid	78.12	80.61
GSMUA_Achr5P24730_001	Banana	plastid	79.1	79.77
OQU88632	Sorghum	endoplasmic reticulum, vacuole	70.83	77.93
KRH45527	Soybean	plastid	77.42	77.31
PGSC0003DMT400041591	Potato	plastid	77.7	76.94
KRH45528	Soybean	plastid	77.0	76.89
Solyc11g010850.1.1	Tomato	plastid	77.0	76.89
VIT_00s0218g00110.t01	Wine grape	plastid	77.42	76.88
KRG99484	Soybean	plastid	76.86	76.75
KRH39479	Soybean	plastid	75.6	73.84
TraesCS1A01G255800.1	Wheat	plastid	68.16	68.26

Protein Annotations

KEGG:00730+2.2.1.7	KEGG:00900+2.2.1.7	Gene3D:3.40.50.920	Gene3D:3.40.50.970	MapMan:9.1.2.2	InterPro:Dxylulose-5-P_synthase
GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0008661
GO:GO:0009058	GO:GO:0009987	GO:GO:0016114	GO:GO:0016740	InterPro:IPR009014	HAMAP:MF_00315
PFAM:PF02779	PFAM:PF02780	PFAM:PF13292	ScanProsite:PS00801	ScanProsite:PS00802	PANTHER:PTHR43322
PANTHER:PTHR43322:SF4	SMART:SM00861	SUPFAM:SSF52518	SUPFAM:SSF52922	InterPro:THDP-binding	TIGRFAMs:TIGR00204
EnsemblPlantsGene:TraesCS1A01G384300	EnsemblPlants:TraesCS1A01G384300.1	InterPro:Transketo_C/PFOR_II	InterPro:Transketolase-like_Pyr-bd	InterPro:Transketolase_BS	InterPro:Transketolase_C
InterPro:Transketolase_N	TIGR:cd02007	TIGR:cd07033	SEG:seg	:	:

Description

No Description!

Coordinates

chr1A:+:554304283..554307171

Molecular Weight (calculated)

76305.6 Da

IEP (calculated)

7.042

GRAVY (calculated)

-0.086

Length

713 amino acids

Sequence
(BLAST)

001: MALQASLPSA FHTAPAVTHA SCRRQFQLRA SAAAAASSPG AGDGKVVMGK QPATGAWKID YSGEKPATPL LDTINYPVHM KNLSTADLEQ LSAELRAEIV
101: NTVSKTGGHL SSSLGVVELS VALHHVFDTP EDKIIWDVGH QSYPHKILTG RRSRMHTMRK TSGLAGFPKR DESAHDAFGA GHSSTSISAA LGMAVARDLQ
201: GKKNHVISVI GDGAMTAGQA YEAMNNSGYL DSNMIVVLND NKQVSLPTAT LDGPSRPVGA LSKALTRLQS STKFRRLREA AKTVTKQIGD STHEVAAKVD
301: EYARGMMSAP GSSLFEELGL YYIGPVDGHN LEDLVTIFEK VKSMPASGPV LVHIVTEKGK GYPPAEAAAD KMHGVVKFDP MTGKQFKTKS PTLSYTQYFA
401: ESLIREAEVD DKVVAIHAAM GGGTGLNYFQ KRFPERCFDV GIAEQHAVTF AAGLAAEGMK PFCAIYSSFL QRGYDQVVHD VDLQRLPVRF ALDRAGLVGA
501: DGPTHCGAFD VTYMACLPNM VVMAPADEAE LMHMVATASA IDDRPSCFRF PRGNGVGAVL PLDNRGTPIQ VGKGRVLVGG NRVALLGYGT MVQACLKAAE
601: LLKEHDVFIT VADARFCKPL DTELIRDLAA EHEILITAEE GSIGGFGSHV AHYLSLSGLL DGPLKLRSMF LPDRYIDHGA AEDQMEEAGL TPRHIAATVL
701: SLLGRPLEAL HLK

Best Arabidopsis Sequence Match ( AT3G21500.1 )
(BLAST)

001: MSYQTQINKF SQMALSVFAF PSYINRNPSL KYLKPSSMSS TKYSKVRATT FSEKGEYYSN RPPTPLLDTI NHPMHMKNLS IKELKVLSDE LRSDVIFNVS
101: KTGGHLGSNL GVVELTVALH YIFNTPHDKI LWDVGHQSYP HKILTGRRGK MKTIRQTNGL SGYTKRRESE HDSFGTGHSS TTLSAGLGMA VGRDLKGMNN
201: SVVSVIGDGA MTAGQAYEAM NNAGYLHSNM IVILNDNKQV SLPTANLDGP TQPVGALSCA LSRLQSNCGM IRETSSTLFE ELGFHYVGPV DGHNIDDLVS
301: ILETLKSTKT IGPVLIHVVT EKGRGYPYAE RADDKYHVLK FDPETGKQFK NISKTQSYTS CFVEALIAEA EADKDIVAIH AAMGGGTMLN LFESRFPTRC
401: FDVGIAEQHA VTFAAGLACE GLKPFCTIYS SFMQRAYDQV VHDVDLQKLP VRFAIDRAGL MGADGPTHCG AFDVTFMACL PNMIVMAPSD EAELFNMVAT
501: AAAIDDRPSC FRYHRGNGIG VSLPPGNKGV PLQIGRGRIL RDGERVALLG YGSAVQRCLE AASMLSERGL KITVADARFC KPLDVALIRS LAKSHEVLIT
601: VEEGSIGGFG SHVVQFLALD GLLDGKLKVY RTWITNGSTS

Arabidopsis Description

DXPS11-deoxy-D-xylulose 5-phosphate synthase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTC7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.