Factsheet for TraesCS1D01G392500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G384300.1	Wheat	plastid	97.05	97.05
HORVU1Hr1G084900.9	Barley	plastid	94.53	94.66
TraesCS2D01G575800.1	Wheat	plastid	93.13	93.13
Os07t0190000-01	Rice	plasma membrane, plastid	87.94	87.94
TraesCS1B01G411100.1	Wheat	mitochondrion	94.25	86.26
EER96005	Sorghum	plastid	86.96	84.93
Zm00001d019060_P001	Maize	plastid	86.26	84.59
GSMUA_Achr5P15060_001	Banana	plastid	78.12	80.61
GSMUA_Achr4P17600_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	46.0	80.39
GSMUA_Achr5P24730_001	Banana	plastid	78.4	79.07
KRH45527	Soybean	plastid	77.56	77.45
PGSC0003DMT400041591	Potato	plastid	77.98	77.22
Solyc11g010850.1.1	Tomato	plastid	77.28	77.17
KRH45528	Soybean	plastid	77.14	77.03
OQU88632	Sorghum	endoplasmic reticulum, vacuole	69.85	76.85
KRG99484	Soybean	plastid	76.86	76.75
VIT_00s0218g00110.t01	Wine grape	plastid	77.28	76.74
KRH39479	Soybean	plastid	75.46	73.7
TraesCS1D01G255100.1	Wheat	plastid	68.86	68.96

Protein Annotations

KEGG:00730+2.2.1.7	KEGG:00900+2.2.1.7	Gene3D:3.40.50.920	Gene3D:3.40.50.970	MapMan:9.1.2.2	ncoils:Coil
InterPro:Dxylulose-5-P_synthase	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0008661	GO:GO:0009058	GO:GO:0009987	GO:GO:0016114	GO:GO:0016740	InterPro:IPR009014
HAMAP:MF_00315	PFAM:PF02779	PFAM:PF02780	PFAM:PF13292	ScanProsite:PS00801	ScanProsite:PS00802
PANTHER:PTHR43322	PANTHER:PTHR43322:SF4	SMART:SM00861	SUPFAM:SSF52518	SUPFAM:SSF52922	InterPro:THDP-binding
TIGRFAMs:TIGR00204	EnsemblPlantsGene:TraesCS1D01G392500	EnsemblPlants:TraesCS1D01G392500.1	InterPro:Transketo_C/PFOR_II	InterPro:Transketolase-like_Pyr-bd	InterPro:Transketolase_BS
InterPro:Transketolase_C	InterPro:Transketolase_N	TIGR:cd02007	TIGR:cd07033	SEG:seg	:

Description

No Description!

Coordinates

chr1D:+:462475437..462478424

Molecular Weight (calculated)

76232.7 Da

IEP (calculated)

7.460

GRAVY (calculated)

-0.088

Length

713 amino acids

Sequence
(BLAST)

001: MALQASLPSA FHTAPAITHA SCRRQFQLRA SAAAAASSAG AGDGKLAMRK EPTTGAWKID YSGKKPATPL LDTINYPVHM KNLSTTDLEQ LSAELRAEIV
101: NTVSKTGGHL SSSLGVVELS VALHHVFDTP EDKIIWDVGH QSYPHKILTG RRSRMHTMRK TSGLAGFPKR DESAHDAFGA GHSSTSISAA LGMAVARDLQ
201: GKKNHVISVI GDGAMTAGQA YEAMNNSGYL DSNMIVVLND NKQVSLPTAT LDGPAKPVGA LSKALTKLQS STKLRRLREA AKTVTKQIGG STHEVAAKVD
301: EYARGMMSAP GSSLFEELGL YYIGPVDGHN LEDLITIFEK VKSMPASGPV LVHIVTEKGK GYPPAEAAAD KMHGVLKFDP TTGKQFKTKS PTLSYTQYFA
401: ESLIREAEVD DKVVAIHAAM GGGTGLNYFQ KRFPERCFDV GIAEQHAVTF AAGLAAEGMK PFCAIYSSFL QRGYDQVVHD VDLQRLPVRF ALDRAGLVGA
501: DGPTHCGAFD VTYMACLPNM VVMAPADEAE LMHMVATASA IDDRPSCFRF PRGNGVGAVL PLDNRGTPMQ VGKGRVLVGG NRVALLGYGT MVQACLKAAE
601: LLKEHGVFIT VADARFCKPL DTELIRDLAA EHEILITAEE GSIGGFGSHV AHYLSLSGIL DGPLKLRSMF LPDRYIDHGA AEDQMEEAGL TPRHIAATVL
701: SLLGRPLEAL HIK

Best Arabidopsis Sequence Match ( AT4G15560.1 )
(BLAST)

001: MASSAFAFPS YIITKGGLST DSCKSTSLSS SRSLVTDLPS PCLKPNNNSH SNRRAKVCAS LAEKGEYYSN RPPTPLLDTI NYPIHMKNLS VKELKQLSDE
101: LRSDVIFNVS KTGGHLGSSL GVVELTVALH YIFNTPQDKI LWDVGHQSYP HKILTGRRGK MPTMRQTNGL SGFTKRGESE HDCFGTGHSS TTISAGLGMA
201: VGRDLKGKNN NVVAVIGDGA MTAGQAYEAM NNAGYLDSDM IVILNDNKQV SLPTATLDGP SPPVGALSSA LSRLQSNPAL RELREVAKGM TKQIGGPMHQ
301: LAAKVDEYAR GMISGTGSSL FEELGLYYIG PVDGHNIDDL VAILKEVKST RTTGPVLIHV VTEKGRGYPY AERADDKYHG VVKFDPATGR QFKTTNKTQS
401: YTTYFAEALV AEAEVDKDVV AIHAAMGGGT GLNLFQRRFP TRCFDVGIAE QHAVTFAAGL ACEGLKPFCA IYSSFMQRAY DQVVHDVDLQ KLPVRFAMDR
501: AGLVGADGPT HCGAFDVTFM ACLPNMIVMA PSDEADLFNM VATAVAIDDR PSCFRYPRGN GIGVALPPGN KGVPIEIGKG RILKEGERVA LLGYGSAVQS
601: CLGAAVMLEE RGLNVTVADA RFCKPLDRAL IRSLAKSHEV LITVEEGSIG GFGSHVVQFL ALDGLLDGKL KWRPMVLPDR YIDHGAPADQ LAEAGLMPSH
701: IAATALNLIG APREALF

Arabidopsis Description

DXSDXS1 [Source:UniProtKB/TrEMBL;Acc:A0A178V5I0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.