CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 2
plastid 6
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH45528	Soybean	plastid	95.38	95.38
KRG99484	Soybean	plastid	94.12	94.12
KRH39479	Soybean	plastid	85.57	83.7
GSMUA_Achr4P17600_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	46.36	81.13
VIT_00s0218g00110.t01	Wine grape	plastid	80.25	79.81
Solyc11g010850.1.1	Tomato	plastid	79.69	79.69
GSMUA_Achr5P15060_001	Banana	plastid	76.75	79.31
Os07t0190000-01	Rice	plasma membrane, plastid	78.85	78.96
PGSC0003DMT400041591	Potato	plastid	79.41	78.75
TraesCS2D01G575800.1	Wheat	plastid	78.43	78.54
HORVU1Hr1G084900.9	Barley	plastid	78.01	78.23
GSMUA_Achr5P24730_001	Banana	plastid	76.89	77.65
TraesCS1D01G392500.1	Wheat	plastid	77.45	77.56
TraesCS1A01G384300.1	Wheat	plastid	77.31	77.42
TraesCS2A01G565400.1	Wheat	plastid	78.01	77.25
Zm00001d019060_P001	Maize	plastid	78.15	76.75
EER96005	Sorghum	plastid	78.43	76.71
TraesCS2B01G626400.2	Wheat	plastid	78.43	74.27
HORVU2Hr1G126150.4	Barley	plastid	77.87	73.16
TraesCS1B01G411100.1	Wheat	mitochondrion	78.15	71.63
OQU88632	Sorghum	endoplasmic reticulum, vacuole	64.01	70.52
KRH02914	Soybean	plastid	71.29	69.92
KRH11287	Soybean	peroxisome, plastid	40.9	67.59
KRH02173	Soybean	plastid	67.37	67.56
KRH20991	Soybean	plastid	67.51	66.85
KRH50940	Soybean	plastid	67.37	65.62
KRH18981	Soybean	endoplasmic reticulum, extracellular	1.82	65.0
KRH52494	Soybean	plastid	53.36	53.21
KRH61817	Soybean	plastid	53.64	53.12
KRH16140	Soybean	mitochondrion, plastid	9.52	51.91

Protein Annotations

KEGG:00730+2.2.1.7	KEGG:00900+2.2.1.7	EntrezGene:100798930	Gene3D:3.40.50.920	Gene3D:3.40.50.970	MapMan:9.1.2.2
EMBL:ACUP02005243	InterPro:Dxylulose-5-P_synthase	EnsemblPlantsGene:GLYMA_08G277000	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0008661	GO:GO:0009058	GO:GO:0009987	GO:GO:0016114
GO:GO:0016740	UniProt:I1KX60	InterPro:IPR009014	EnsemblPlants:KRH45527	ProteinID:KRH45527	ProteinID:KRH45527.1
HAMAP:MF_00315	PFAM:PF02779	PFAM:PF02780	PFAM:PF13292	ScanProsite:PS00801	ScanProsite:PS00802
PANTHER:PTHR43322	PANTHER:PTHR43322:SF4	MetaCyc:PWY-6891	MetaCyc:PWY-6892	MetaCyc:PWY-7560	SMART:SM00861
SUPFAM:SSF52518	SUPFAM:SSF52922	InterPro:THDP-binding	TIGRFAMs:TIGR00204	InterPro:Transketo_C/PFOR_II	InterPro:Transketolase-like_Pyr-bd
InterPro:Transketolase_BS	InterPro:Transketolase_C	InterPro:Transketolase_N	UniParc:UPI0002338244	SEG:seg	:

Description

hypothetical protein

Coordinates

chr8:+:37076771..37081298

Molecular Weight (calculated)

76890.5 Da

IEP (calculated)

7.387

GRAVY (calculated)

-0.094

Length

714 amino acids

Sequence
(BLAST)

001: MAFCGGTFVK PNYSASPCYK YTALSPYHGC RNKFCVRVSA SGSADEERTI IKKEKDGWKI NYSGEKPATP LLDTVNHPIH MKNLSTQDLE QLAAELRADI
101: VHSVSETGGH LSSSLGVVEL SVALHHVFNT PEDKIIWDVG HQAYPHKILT GRRSRMHTIR KTSGLAGFPK RDESVHDAFG VGHSSTSISA GLGMAVARDL
201: LGKNNSIISV IGDGALTAGQ AYEAMNNAGF LDSNMIVVLN DNKQVSLPTA TLDGPATPVG ALSSALSKIQ ASSEFRKLRE AAKTITKQIG GQTHQVAAKV
301: DEYARGMISA SGSTLFEELG LYYIGPVDGH NIEDLVTIFE KVKAMPAPGP VLIHVVTEKG KGYPPAEKAA DRMHGVVKFD PKTGHQLKAK SSTLSYTQYF
401: AESLIKEAEI DNKIVAIHAA MGGGTGLNYF QKKFPERCFD VGIAEQHAVT FAAGLAAEGL KPFCAIYSSF LQRGYDQVVH DVDLQKLPVR FALDRAGLVG
501: ADGPTHCGAF DITYMSCLPN MVVMAPSDET ELMHMVATAA AIDDRPSCFR FPRGNGIGAT LPLNNKGTPL EIGKGRILVE GSRVAILGYG SVVQQCRQAS
601: EMLKELGIDV TVADARFCKP LDTGLIRLLA KEHEILITVE EGSIGGFGSH VSQFLSLSGI LDGPLKWRAM MLPDRYIEHG SPQVQIEEAG LSSKQIAATV
701: LSLMERPKQA LLFK

Best Arabidopsis Sequence Match ( AT3G21500.1 )
(BLAST)

001: MSYQTQINKF SQMALSVFAF PSYINRNPSL KYLKPSSMSS TKYSKVRATT FSEKGEYYSN RPPTPLLDTI NHPMHMKNLS IKELKVLSDE LRSDVIFNVS
101: KTGGHLGSNL GVVELTVALH YIFNTPHDKI LWDVGHQSYP HKILTGRRGK MKTIRQTNGL SGYTKRRESE HDSFGTGHSS TTLSAGLGMA VGRDLKGMNN
201: SVVSVIGDGA MTAGQAYEAM NNAGYLHSNM IVILNDNKQV SLPTANLDGP TQPVGALSCA LSRLQSNCGM IRETSSTLFE ELGFHYVGPV DGHNIDDLVS
301: ILETLKSTKT IGPVLIHVVT EKGRGYPYAE RADDKYHVLK FDPETGKQFK NISKTQSYTS CFVEALIAEA EADKDIVAIH AAMGGGTMLN LFESRFPTRC
401: FDVGIAEQHA VTFAAGLACE GLKPFCTIYS SFMQRAYDQV VHDVDLQKLP VRFAIDRAGL MGADGPTHCG AFDVTFMACL PNMIVMAPSD EAELFNMVAT
501: AAAIDDRPSC FRYHRGNGIG VSLPPGNKGV PLQIGRGRIL RDGERVALLG YGSAVQRCLE AASMLSERGL KITVADARFC KPLDVALIRS LAKSHEVLIT
601: VEEGSIGGFG SHVVQFLALD GLLDGKLKVY RTWITNGSTS

Arabidopsis Description

DXPS11-deoxy-D-xylulose 5-phosphate synthase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTC7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.