Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_09s0002g02050.t01 | Wine grape | cytosol | 70.0 | 11.67 |
| VIT_02s0012g00960.t01 | Wine grape | cytosol | 60.0 | 3.14 |
| KRH11287 | Soybean | peroxisome, plastid | 65.0 | 3.01 |
| KRH02914 | Soybean | plastid | 95.0 | 2.61 |
| KRH02173 | Soybean | plastid | 70.0 | 1.97 |
| KRH52494 | Soybean | plastid | 70.0 | 1.96 |
| KRH20991 | Soybean | plastid | 70.0 | 1.94 |
| KRH61817 | Soybean | plastid | 70.0 | 1.94 |
| KRH39479 | Soybean | plastid | 70.0 | 1.92 |
| KRH50940 | Soybean | plastid | 70.0 | 1.91 |
| KRH45527 | Soybean | plastid | 65.0 | 1.82 |
| KRH45528 | Soybean | plastid | 65.0 | 1.82 |
| KRG99484 | Soybean | plastid | 55.0 | 1.54 |
| KRH16140 | Soybean | mitochondrion, plastid | 5.0 | 0.76 |
Protein Annotations
| EMBL:ACUP02008154 | EnsemblPlants:KRH18981 | EnsemblPlantsGene:GLYMA_13G093900 | ProteinID:KRH18981 | ProteinID:KRH18981.1 | UniParc:UPI0006EDB970 |
| UniProt:A0A0R0GVA0 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr13:-:20920776..20920835
Molecular Weight (calculated)
2016.5 Da
IEP (calculated)
3.614
GRAVY (calculated)
0.970
Length
20 amino acids
Sequence
(BLAST)
(BLAST)
1: MAGGAGACLF EELGLFYIGP
001: MGSASIGYQF GISARFYGNF NLSSDITVSS LPCKLDVSIK SLFSAPSSTH KEYSNRARVC SLPNTDGYCD EKFETPILDS IETPLQLKNL SVKELKLLAD
101: EIRTELHSVL WKKTQKSMNP SFAAIELTLA LHYVFRAPVD NILWDAVEQT YAHKVLTRRW SAIPSRQNSG ISGVTSRLES EYDSFGTGHG CNSISAGLGL
201: AVARDMKGKR DRVVAVIDNV TITAGQAYEA MSNAGYLDSN MIVILNDSRH SLHPNMEEGS KASISALSSI MSKIQSSKVF RKFRELAKAM TKRIGKGMYE
301: WAAKVDEYAR GMVGPTGSTL FEELGLYYIG PVDGHNIEDL VCVLREVSSL DSMGPVLVHV ITEGNRDAET VKNIMVKDRR TYSDCFVEAL VMEAEKDRDI
401: VVVHAGMEMD PSLLTFQERF PDRFFNVGMA EQHAVTFSAG LSSGGLKPFC IIPSAFLQRA YDQVVHDVDR QRKAVRFVIT SAGLVGSDGP VQCGAFDIAF
501: MSSLPNMIAM APADEDELVN MVATAAYVTD RPVCFRFPRG SIVNMNYLVP TGLPIESRSE EEEFS
101: EIRTELHSVL WKKTQKSMNP SFAAIELTLA LHYVFRAPVD NILWDAVEQT YAHKVLTRRW SAIPSRQNSG ISGVTSRLES EYDSFGTGHG CNSISAGLGL
201: AVARDMKGKR DRVVAVIDNV TITAGQAYEA MSNAGYLDSN MIVILNDSRH SLHPNMEEGS KASISALSSI MSKIQSSKVF RKFRELAKAM TKRIGKGMYE
301: WAAKVDEYAR GMVGPTGSTL FEELGLYYIG PVDGHNIEDL VCVLREVSSL DSMGPVLVHV ITEGNRDAET VKNIMVKDRR TYSDCFVEAL VMEAEKDRDI
401: VVVHAGMEMD PSLLTFQERF PDRFFNVGMA EQHAVTFSAG LSSGGLKPFC IIPSAFLQRA YDQVVHDVDR QRKAVRFVIT SAGLVGSDGP VQCGAFDIAF
501: MSSLPNMIAM APADEDELVN MVATAAYVTD RPVCFRFPRG SIVNMNYLVP TGLPIESRSE EEEFS
Arabidopsis Description
DXPS31-D-deoxyxylulose 5-phosphate synthase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LFL9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.