Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH18981 | Soybean | endoplasmic reticulum, extracellular | 11.67 | 70.0 |
| VIT_02s0012g00960.t01 | Wine grape | cytosol | 81.67 | 25.65 |
| VIT_05s0020g02130.t01 | Wine grape | plastid | 69.17 | 11.59 |
| VIT_00s0218g00110.t01 | Wine grape | plastid | 55.0 | 9.19 |
| VIT_11s0052g01780.t01 | Wine grape | cytosol | 49.17 | 8.55 |
| VIT_11s0052g01730.t01 | Wine grape | plastid | 51.67 | 8.44 |
| VIT_11s0052g01240.t01 | Wine grape | plastid | 46.67 | 7.66 |
| VIT_04s0008g04970.t01 | Wine grape | plastid | 45.83 | 7.65 |
Protein Annotations
| KEGG:00730+2.2.1.7 | KEGG:00900+2.2.1.7 | Gene3D:3.40.50.970 | MapMan:35.1 | ProteinID:CCB59333 | ProteinID:CCB59333.1 |
| InterPro:Dxylulose-5-P_synthase | UniProt:F6HY10 | EMBL:FN596494 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008661 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016114 |
| GO:GO:0016740 | PFAM:PF13292 | PANTHER:PTHR43322 | PANTHER:PTHR43322:SF4 | SUPFAM:SSF52518 | InterPro:THDP-binding |
| UniParc:UPI0002109FA3 | ArrayExpress:VIT_09s0002g02050 | EnsemblPlantsGene:VIT_09s0002g02050 | EnsemblPlants:VIT_09s0002g02050.t01 | RefSeq:XP_003632782 | RefSeq:XP_003632782.1 |
Description
No Description!
Coordinates
chr9:+:1864868..1866048
Molecular Weight (calculated)
13213.1 Da
IEP (calculated)
6.630
GRAVY (calculated)
0.196
Length
120 amino acids
Sequence
(BLAST)
(BLAST)
001: MHELAAKVDE YALGMVSGSG STLFEELGLY YIGPVDGHNI DDLVAILKEV KSTKTTGPVL IHAVIEKGRG YPYAEKAADH QLQSRQVHVH GHLWAIVPFP
101: ISPSLILKNI LLNPFLQIIF
101: ISPSLILKNI LLNPFLQIIF
001: MASSAFAFPS YIITKGGLST DSCKSTSLSS SRSLVTDLPS PCLKPNNNSH SNRRAKVCAS LAEKGEYYSN RPPTPLLDTI NYPIHMKNLS VKELKQLSDE
101: LRSDVIFNVS KTGGHLGSSL GVVELTVALH YIFNTPQDKI LWDVGHQSYP HKILTGRRGK MPTMRQTNGL SGFTKRGESE HDCFGTGHSS TTISAGLGMA
201: VGRDLKGKNN NVVAVIGDGA MTAGQAYEAM NNAGYLDSDM IVILNDNKQV SLPTATLDGP SPPVGALSSA LSRLQSNPAL RELREVAKGM TKQIGGPMHQ
301: LAAKVDEYAR GMISGTGSSL FEELGLYYIG PVDGHNIDDL VAILKEVKST RTTGPVLIHV VTEKGRGYPY AERADDKYHG VVKFDPATGR QFKTTNKTQS
401: YTTYFAEALV AEAEVDKDVV AIHAAMGGGT GLNLFQRRFP TRCFDVGIAE QHAVTFAAGL ACEGLKPFCA IYSSFMQRAY DQVVHDVDLQ KLPVRFAMDR
501: AGLVGADGPT HCGAFDVTFM ACLPNMIVMA PSDEADLFNM VATAVAIDDR PSCFRYPRGN GIGVALPPGN KGVPIEIGKG RILKEGERVA LLGYGSAVQS
601: CLGAAVMLEE RGLNVTVADA RFCKPLDRAL IRSLAKSHEV LITVEEGSIG GFGSHVVQFL ALDGLLDGKL KWRPMVLPDR YIDHGAPADQ LAEAGLMPSH
701: IAATALNLIG APREALF
101: LRSDVIFNVS KTGGHLGSSL GVVELTVALH YIFNTPQDKI LWDVGHQSYP HKILTGRRGK MPTMRQTNGL SGFTKRGESE HDCFGTGHSS TTISAGLGMA
201: VGRDLKGKNN NVVAVIGDGA MTAGQAYEAM NNAGYLDSDM IVILNDNKQV SLPTATLDGP SPPVGALSSA LSRLQSNPAL RELREVAKGM TKQIGGPMHQ
301: LAAKVDEYAR GMISGTGSSL FEELGLYYIG PVDGHNIDDL VAILKEVKST RTTGPVLIHV VTEKGRGYPY AERADDKYHG VVKFDPATGR QFKTTNKTQS
401: YTTYFAEALV AEAEVDKDVV AIHAAMGGGT GLNLFQRRFP TRCFDVGIAE QHAVTFAAGL ACEGLKPFCA IYSSFMQRAY DQVVHDVDLQ KLPVRFAMDR
501: AGLVGADGPT HCGAFDVTFM ACLPNMIVMA PSDEADLFNM VATAVAIDDR PSCFRYPRGN GIGVALPPGN KGVPIEIGKG RILKEGERVA LLGYGSAVQS
601: CLGAAVMLEE RGLNVTVADA RFCKPLDRAL IRSLAKSHEV LITVEEGSIG GFGSHVVQFL ALDGLLDGKL KWRPMVLPDR YIDHGAPADQ LAEAGLMPSH
701: IAATALNLIG APREALF
Arabidopsis Description
DXSDXS1 [Source:UniProtKB/TrEMBL;Acc:A0A178V5I0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.