Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- plastid 4
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_11s0052g01730.t01 | Wine grape | plastid | 93.04 | 87.35 |
| VIT_11s0052g01240.t01 | Wine grape | plastid | 80.43 | 75.92 |
| KRH02914 | Soybean | plastid | 77.83 | 73.76 |
| VIT_00s0218g00110.t01 | Wine grape | plastid | 74.64 | 71.73 |
| VIT_05s0020g02130.t01 | Wine grape | plastid | 68.99 | 66.48 |
| VIT_04s0008g04970.t01 | Wine grape | plastid | 53.77 | 51.6 |
| VIT_09s0002g02050.t01 | Wine grape | cytosol | 8.55 | 49.17 |
| VIT_02s0012g00960.t01 | Wine grape | cytosol | 13.62 | 24.61 |
Protein Annotations
| KEGG:00730+2.2.1.7 | KEGG:00900+2.2.1.7 | EntrezGene:100244405 | wikigene:100244405 | Gene3D:3.40.50.920 | Gene3D:3.40.50.970 |
| MapMan:9.1.2.2 | ProteinID:CBI17763 | ProteinID:CBI17763.3 | UniProt:D7SQ33 | InterPro:Dxylulose-5-P_synthase | EMBL:FN594964 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008661 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016114 | GO:GO:0016740 | InterPro:IPR009014 | EntrezGene:LOC100244405 |
| wikigene:LOC100244405 | HAMAP:MF_00315 | PFAM:PF02779 | PFAM:PF02780 | PFAM:PF13292 | ScanProsite:PS00802 |
| PANTHER:PTHR43322 | PANTHER:PTHR43322:SF2 | SMART:SM00861 | SUPFAM:SSF52518 | SUPFAM:SSF52922 | InterPro:THDP-binding |
| TIGRFAMs:TIGR00204 | InterPro:Transketo_C/PFOR_II | InterPro:Transketolase-like_Pyr-bd | InterPro:Transketolase_BS | InterPro:Transketolase_C | UniParc:UPI00015CB6F8 |
| ArrayExpress:VIT_11s0052g01780 | EnsemblPlantsGene:VIT_11s0052g01780 | EnsemblPlants:VIT_11s0052g01780.t01 | RefSeq:XP_002271782 | RefSeq:XP_002271782.2 | SEG:seg |
Description
No Description!
Coordinates
chr11:+:19599532..19603061
Molecular Weight (calculated)
74147.0 Da
IEP (calculated)
6.794
GRAVY (calculated)
-0.119
Length
690 amino acids
Sequence
(BLAST)
(BLAST)
001: MVTAAQDNNS SEDKNTMVRS EEQARRNPRF TRSLNFSGEK PSTPVLDTIN YPIHMKNLSI GELETLAAEL REEIVYTVSK TGGHLSSSLG VAELTIALHH
101: VFDTPEDKII WDVGHQAYAH KILTGRRSRM HTIRQTCGLA GFPKRDESIY DAFGAGHSST SISAGLGMAA GRDLLGKNNN VISVIGDGAM TAGQAYEAMN
201: NAGYLDSNLI IILNDNGQVS LPTATVDGPA PPVGALSKAL TNLQSSRKFR QLREAAKGFT KHVGGQAHEI AAKVDEYMRG IVGGSHACLF EELGLSYIGP
301: VDGHNVEDLV HILTKVRVMP APGPVLVHVI TEKGKGYAPA EVAADKMHGV VKFDAMSGKQ LKTKSKTLSH TQYFAESLIA EAERDENIVA IHAAMGGGTG
401: LNLFQKRFPD RCFDVGIAEQ HAVTFAAGLD TEGLKPFCAI YSSFLQRGFD QVAHDVDLQK LPVRFAMDRA GLVGADGPTH CGAFDTTFMA CLPNMVVMAP
501: SCESELMHMV ATAAAIDDRP SCFRYPGGNG IGSILPQNNK GTPLEIGKGR VLKEGSRVAI LGYGTIVQNC LAAGKLLQVL GVSTTVADAR FCKPLDGDLI
601: RQLAQEHEVL ITVEEGSIGG FSSHVSHFLG LNGLLDGKLK WRPMMLPDRY INHGSQTEQF EEAGLSSRHI AATVLSVMGE NKDSLHLLKL
101: VFDTPEDKII WDVGHQAYAH KILTGRRSRM HTIRQTCGLA GFPKRDESIY DAFGAGHSST SISAGLGMAA GRDLLGKNNN VISVIGDGAM TAGQAYEAMN
201: NAGYLDSNLI IILNDNGQVS LPTATVDGPA PPVGALSKAL TNLQSSRKFR QLREAAKGFT KHVGGQAHEI AAKVDEYMRG IVGGSHACLF EELGLSYIGP
301: VDGHNVEDLV HILTKVRVMP APGPVLVHVI TEKGKGYAPA EVAADKMHGV VKFDAMSGKQ LKTKSKTLSH TQYFAESLIA EAERDENIVA IHAAMGGGTG
401: LNLFQKRFPD RCFDVGIAEQ HAVTFAAGLD TEGLKPFCAI YSSFLQRGFD QVAHDVDLQK LPVRFAMDRA GLVGADGPTH CGAFDTTFMA CLPNMVVMAP
501: SCESELMHMV ATAAAIDDRP SCFRYPGGNG IGSILPQNNK GTPLEIGKGR VLKEGSRVAI LGYGTIVQNC LAAGKLLQVL GVSTTVADAR FCKPLDGDLI
601: RQLAQEHEVL ITVEEGSIGG FSSHVSHFLG LNGLLDGKLK WRPMMLPDRY INHGSQTEQF EEAGLSSRHI AATVLSVMGE NKDSLHLLKL
001: MASSAFAFPS YIITKGGLST DSCKSTSLSS SRSLVTDLPS PCLKPNNNSH SNRRAKVCAS LAEKGEYYSN RPPTPLLDTI NYPIHMKNLS VKELKQLSDE
101: LRSDVIFNVS KTGGHLGSSL GVVELTVALH YIFNTPQDKI LWDVGHQSYP HKILTGRRGK MPTMRQTNGL SGFTKRGESE HDCFGTGHSS TTISAGLGMA
201: VGRDLKGKNN NVVAVIGDGA MTAGQAYEAM NNAGYLDSDM IVILNDNKQV SLPTATLDGP SPPVGALSSA LSRLQSNPAL RELREVAKGM TKQIGGPMHQ
301: LAAKVDEYAR GMISGTGSSL FEELGLYYIG PVDGHNIDDL VAILKEVKST RTTGPVLIHV VTEKGRGYPY AERADDKYHG VVKFDPATGR QFKTTNKTQS
401: YTTYFAEALV AEAEVDKDVV AIHAAMGGGT GLNLFQRRFP TRCFDVGIAE QHAVTFAAGL ACEGLKPFCA IYSSFMQRAY DQVVHDVDLQ KLPVRFAMDR
501: AGLVGADGPT HCGAFDVTFM ACLPNMIVMA PSDEADLFNM VATAVAIDDR PSCFRYPRGN GIGVALPPGN KGVPIEIGKG RILKEGERVA LLGYGSAVQS
601: CLGAAVMLEE RGLNVTVADA RFCKPLDRAL IRSLAKSHEV LITVEEGSIG GFGSHVVQFL ALDGLLDGKL KWRPMVLPDR YIDHGAPADQ LAEAGLMPSH
701: IAATALNLIG APREALF
101: LRSDVIFNVS KTGGHLGSSL GVVELTVALH YIFNTPQDKI LWDVGHQSYP HKILTGRRGK MPTMRQTNGL SGFTKRGESE HDCFGTGHSS TTISAGLGMA
201: VGRDLKGKNN NVVAVIGDGA MTAGQAYEAM NNAGYLDSDM IVILNDNKQV SLPTATLDGP SPPVGALSSA LSRLQSNPAL RELREVAKGM TKQIGGPMHQ
301: LAAKVDEYAR GMISGTGSSL FEELGLYYIG PVDGHNIDDL VAILKEVKST RTTGPVLIHV VTEKGRGYPY AERADDKYHG VVKFDPATGR QFKTTNKTQS
401: YTTYFAEALV AEAEVDKDVV AIHAAMGGGT GLNLFQRRFP TRCFDVGIAE QHAVTFAAGL ACEGLKPFCA IYSSFMQRAY DQVVHDVDLQ KLPVRFAMDR
501: AGLVGADGPT HCGAFDVTFM ACLPNMIVMA PSDEADLFNM VATAVAIDDR PSCFRYPRGN GIGVALPPGN KGVPIEIGKG RILKEGERVA LLGYGSAVQS
601: CLGAAVMLEE RGLNVTVADA RFCKPLDRAL IRSLAKSHEV LITVEEGSIG GFGSHVVQFL ALDGLLDGKL KWRPMVLPDR YIDHGAPADQ LAEAGLMPSH
701: IAATALNLIG APREALF
Arabidopsis Description
DXSDXS1 [Source:UniProtKB/TrEMBL;Acc:A0A178V5I0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.