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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • mitochondrion 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, peroxisome, plastid
BaCelLo:plastid
EpiLoc:plastid
iPSORT:mitochondrion
MultiLoc:peroxisome
Plant-mPloc:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG92439
KRG98682
KRH02173
KRH05426
KRH05459
KRH11287
KRH15534
KRH16140
KRH20991
KRH22690
KRH25207
KRH25208
KRH26622
KRH30442
KRH31637
KRH34359
KRH46251
KRH50940
KRH52197
KRH61504
KRH69065
KRH73804

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G15560.1 KRH22690 AT1G08290.1 24104567
AT4G15560.1 KRH25207 AT1G08290.1 24104567
AT4G15560.1 KRH25208 AT1G08290.1 24104567
AT4G15560.1 KRH26622 AT1G08290.1 24104567
AT4G15560.1 KRH30442 AT1G08290.1 24104567
AT4G15560.1 KRH05426 AT2G26080.1 24104567
AT4G15560.1 KRH05459 AT2G26080.1 24104567
AT4G15560.1 KRH15534 AT2G26080.1 24104567
AT4G15560.1 KRH52197 AT2G26080.1 24104567
AT4G15560.1 KRH61504 AT2G26080.1 24104567
AT4G15560.1 KRG92439 AT3G22970.1 24104567
AT4G15560.1 KRH31637 AT3G22970.1 24104567
AT4G15560.1 KRH34359 AT3G22970.1 24104567
AT4G15560.1 KRH69065 AT3G22970.1 24104567
AT4G15560.1 KRH02173 AT4G15560.1 21798944
AT4G15560.1 KRH11287 AT4G15560.1 21798944
AT4G15560.1 KRH16140 AT4G15560.1 21798944
AT4G15560.1 KRH20991 AT4G15560.1 21798944
AT4G15560.1 KRH50940 AT4G15560.1 21798944
AT4G15560.1 KRG98682 AT4G26780.1 24104567
AT4G15560.1 KRH46251 AT4G26780.1 24104567
AT4G15560.1 KRH73804 AT4G26780.1 24104567
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH02173 Soybean plastid 89.63 92.28
GSMUA_Achr10P... Banana cytosol 77.49 89.45
KRH20991 Soybean plastid 85.4 86.82
VIT_05s0020g02130.t01 Wine grape plastid 83.49 85.47
PGSC0003DMT400058821 Potato plastid 83.77 85.4
Solyc01g067890.2.1 Tomato plastid 83.77 85.4
Bra001832.1-P Field mustard peroxisome 71.76 85.11
Os05t0408900-03 Rice plastid 80.9 82.36
TraesCS1A01G255800.1 Wheat plastid 79.67 82.02
AT4G15560.1 Thale cress plastid 80.22 82.01
TraesCS1D01G255100.1 Wheat plastid 79.54 81.88
TraesCS1B01G266500.1 Wheat plastid 79.4 81.74
KRH11287 Soybean peroxisome, plastid 48.02 81.48
EES19518 Sorghum mitochondrion, plastid 80.22 81.44
CDY09752 Canola plastid 79.67 81.34
CDY64791 Canola plastid 79.4 81.28
Bra033495.1-P Field mustard plastid 78.31 81.07
CDX90583 Canola plastid 75.58 80.99
Bra012779.1-P Field mustard plastid 75.31 80.7
HORVU1Hr1G060610.9 Barley mitochondrion, plastid 79.4 80.17
GSMUA_Achr3P24940_001 Banana plastid 81.58 79.95
CDY32433 Canola plastid 77.49 79.33
Zm00001d038170_P001 Maize plastid 80.63 79.01
CDY48893 Canola plastid 76.53 78.35
AT3G21500.3 Thale cress plastid 70.94 76.81
CDY52177 Canola plastid 76.53 76.53
KRH18981 Soybean endoplasmic reticulum, extracellular 1.91 70.0
KRH45528 Soybean plastid 66.3 68.07
KRH39479 Soybean plastid 67.12 67.4
KRH45527 Soybean plastid 65.62 67.37
KRG99484 Soybean plastid 65.35 67.09
KRH02914 Soybean plastid 63.3 63.74
KRH16140 Soybean mitochondrion, plastid 10.64 59.54
KRH61817 Soybean plastid 55.39 56.31
KRH52494 Soybean plastid 54.98 56.28
Protein Annotations
KEGG:00730+2.2.1.7KEGG:00900+2.2.1.7Gene3D:3.40.50.920Gene3D:3.40.50.970MapMan:9.1.2.2EMBL:ACUP02004720
InterPro:Dxylulose-5-P_synthaseEnsemblPlantsGene:GLYMA_07G252600GO:GO:0003674GO:GO:0003824GO:GO:0006629GO:GO:0008150
GO:GO:0008152GO:GO:0008661GO:GO:0009058GO:GO:0009987GO:GO:0016114GO:GO:0016740
UniProt:I1KN45InterPro:IPR009014EnsemblPlants:KRH50940ProteinID:KRH50940ProteinID:KRH50940.1HAMAP:MF_00315
PFAM:PF02779PFAM:PF02780PFAM:PF13292ScanProsite:PS00801ScanProsite:PS00802PANTHER:PTHR43322
PANTHER:PTHR43322:SF4MetaCyc:PWY-6891MetaCyc:PWY-6892MetaCyc:PWY-7560SMART:SM00861SUPFAM:SSF52518
SUPFAM:SSF52922SignalP:SignalP-noTMInterPro:THDP-bindingTIGRFAMs:TIGR00204InterPro:Transketo_C/PFOR_IIInterPro:Transketolase-like_Pyr-bd
InterPro:Transketolase_BSInterPro:Transketolase_CInterPro:Transketolase_NUniParc:UPI00023C622DSEG:seg:
Description
hypothetical protein
Coordinates
chr7:-:43004395..43008228
Molecular Weight (calculated)
79180.2 Da
IEP (calculated)
7.682
GRAVY (calculated)
-0.089
Length
733 amino acids
Sequence
(BLAST)
001: MAQHKTSTSF LLICWTPTIQ SVSASMDLSA LSSYRTLGKL LPLPSHSQWG LHFLAHAHRL HQMKKRPCGV YASLSESGEY YSHRPPTPLL DTVNYPIHMK
101: NLSAKELKQL ADELRSDVIF SVSRTGGHLG SSLGVVELTV ALHYVFNAPQ DKILWDVGHQ SYPHKILTGR RDQMHTMRQT NGLSGFTKRS ESEFDCFGTG
201: HSSTTISAGL GMAVGRDLKG RKNNVVAVIG DGAMTAGQAY EAMNNAGYLD SDMIVILNDN KQVSLPTATL DGPIPPVGAL SSALSRLQSN RPLRELREVA
301: KGVTKRIGGP MHELAAKVDE YARGMISGSG SSLFEELGLY YIGPVDGHNI DDLVAILNEV KSTKTTGPVL IHVITEKGRG YPYAEKAADK YHGVTKFDPP
401: TGKQFKSKAT TQSYTTYFAE ALIAEAEADK DVVAIHAAMG GGTGMNLFHR RFPTRCFDVG IAEQHAVTFA AGLACEGLKP FCAIYSSFMQ RAYDQVVHDV
501: DLQKLPVRFA MDRAGLVGAD GPTHCGSFDV TFMACLPNMV VMAPSDEADL FHMVATAAAI NDRPSCFRYP RGNGIGVQLP TGNKGTPLEI GKGRILIEGE
601: RVALLGYGSA VQNCLAAASL VECHGLRLTV ADARFCKPLD RSLIRSLAKS HEVLITVEEG SIGGFGSHVA QFMALDGLLD GKLKWRPIVL PDRYIDHGSP
701: ADQLSLAGLT PSHIAATVFN VLGQTREALE VMS
Best Arabidopsis Sequence Match ( AT4G15560.1 )
(BLAST)
001: MASSAFAFPS YIITKGGLST DSCKSTSLSS SRSLVTDLPS PCLKPNNNSH SNRRAKVCAS LAEKGEYYSN RPPTPLLDTI NYPIHMKNLS VKELKQLSDE
101: LRSDVIFNVS KTGGHLGSSL GVVELTVALH YIFNTPQDKI LWDVGHQSYP HKILTGRRGK MPTMRQTNGL SGFTKRGESE HDCFGTGHSS TTISAGLGMA
201: VGRDLKGKNN NVVAVIGDGA MTAGQAYEAM NNAGYLDSDM IVILNDNKQV SLPTATLDGP SPPVGALSSA LSRLQSNPAL RELREVAKGM TKQIGGPMHQ
301: LAAKVDEYAR GMISGTGSSL FEELGLYYIG PVDGHNIDDL VAILKEVKST RTTGPVLIHV VTEKGRGYPY AERADDKYHG VVKFDPATGR QFKTTNKTQS
401: YTTYFAEALV AEAEVDKDVV AIHAAMGGGT GLNLFQRRFP TRCFDVGIAE QHAVTFAAGL ACEGLKPFCA IYSSFMQRAY DQVVHDVDLQ KLPVRFAMDR
501: AGLVGADGPT HCGAFDVTFM ACLPNMIVMA PSDEADLFNM VATAVAIDDR PSCFRYPRGN GIGVALPPGN KGVPIEIGKG RILKEGERVA LLGYGSAVQS
601: CLGAAVMLEE RGLNVTVADA RFCKPLDRAL IRSLAKSHEV LITVEEGSIG GFGSHVVQFL ALDGLLDGKL KWRPMVLPDR YIDHGAPADQ LAEAGLMPSH
701: IAATALNLIG APREALF
Arabidopsis Description
DXSDXS1 [Source:UniProtKB/TrEMBL;Acc:A0A178V5I0]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.