Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G22970.1 | KRH02173 | AT4G15560.1 | 24104567 |
| AT3G22970.1 | KRH11287 | AT4G15560.1 | 24104567 |
| AT3G22970.1 | KRH16140 | AT4G15560.1 | 24104567 |
| AT3G22970.1 | KRH20991 | AT4G15560.1 | 24104567 |
| AT3G22970.1 | KRH50940 | AT4G15560.1 | 24104567 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH31637 | Soybean | cytosol | 92.08 | 87.99 |
| KRH34359 | Soybean | plastid | 65.03 | 61.5 |
| KRG92439 | Soybean | plastid | 65.3 | 60.81 |
| VIT_05s0020g04500.t01 | Wine grape | nucleus | 59.84 | 56.74 |
| Bra001897.1-P | Field mustard | cytosol | 51.09 | 56.16 |
| CDX92970 | Canola | cytosol | 51.09 | 56.16 |
| CDX94877 | Canola | cytosol | 52.73 | 55.62 |
| CDY16266 | Canola | nucleus | 54.1 | 55.46 |
| CDY29750 | Canola | nucleus, plastid | 53.55 | 55.37 |
| Bra036877.1-P | Field mustard | cytosol, plastid | 53.28 | 55.08 |
| AT4G14620.1 | Thale cress | cytosol | 50.27 | 53.96 |
| Bra033896.1-P | Field mustard | cytosol | 53.28 | 53.13 |
| AT3G22970.1 | Thale cress | plastid | 53.55 | 52.97 |
| CDY10330 | Canola | cytosol | 51.64 | 51.64 |
| PGSC0003DMT400041951 | Potato | cytosol | 51.64 | 51.08 |
| Solyc09g082980.2.1 | Tomato | nucleus | 53.83 | 49.5 |
| PGSC0003DMT400015576 | Potato | cytosol, plastid | 53.55 | 49.49 |
| Solyc06g053910.2.1 | Tomato | cytosol, plastid | 51.37 | 48.33 |
| KRH71351 | Soybean | cytosol | 46.17 | 47.08 |
| CDY10329 | Canola | plastid | 48.36 | 46.83 |
| GSMUA_Achr3P15230_001 | Banana | cytosol | 42.9 | 46.59 |
| KRH32089 | Soybean | cytosol | 42.35 | 45.72 |
| KRG95606 | Soybean | cytosol | 44.54 | 45.15 |
| GSMUA_Achr4P14880_001 | Banana | mitochondrion | 32.51 | 45.08 |
| GSMUA_Achr8P26930_001 | Banana | cytosol | 43.44 | 45.04 |
| GSMUA_Achr4P21100_001 | Banana | cytosol, plastid | 43.44 | 44.29 |
| GSMUA_Achr8P04470_001 | Banana | cytosol | 41.53 | 41.3 |
| GSMUA_Achr8P20590_001 | Banana | plastid | 40.71 | 41.05 |
| GSMUA_Achr9P10660_001 | Banana | cytosol, plastid | 42.08 | 40.31 |
| EER95459 | Sorghum | plastid | 31.97 | 39.13 |
| TraesCS5A01G439200.1 | Wheat | plastid | 39.89 | 38.93 |
| TraesCS5B01G442200.1 | Wheat | plastid | 39.89 | 38.93 |
| Zm00001d032955_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 31.69 | 38.67 |
| TraesCS5D01G446400.1 | Wheat | plastid | 39.62 | 38.06 |
| Os03t0162500-01 | Rice | plastid | 31.69 | 37.78 |
| Zm00001d027763_P001 | Maize | plastid | 30.6 | 37.33 |
| EER91615 | Sorghum | mitochondrion | 29.78 | 37.2 |
| GSMUA_Achr9P25590_001 | Banana | plastid | 41.26 | 37.1 |
| Zm00001d018962_P001 | Maize | mitochondrion, plastid | 38.25 | 36.55 |
| TraesCS4D01G277000.1 | Wheat | peroxisome, plastid | 30.87 | 36.33 |
| TraesCS4B01G278500.1 | Wheat | peroxisome, plastid | 30.87 | 36.33 |
| Os03t0796600-01 | Rice | cytosol, nucleus, plastid | 40.16 | 36.3 |
| TraesCS4A01G025500.1 | Wheat | peroxisome, plastid | 31.15 | 36.19 |
| HORVU4Hr1G073730.1 | Barley | peroxisome, plastid | 31.15 | 36.19 |
| EER93295 | Sorghum | plastid | 38.8 | 36.13 |
| HORVU5Hr1G105950.2 | Barley | plastid | 39.89 | 35.87 |
| Zm00001d034444_P002 | Maize | plastid | 39.34 | 35.56 |
| Os10t0417800-01 | Rice | plastid | 29.23 | 35.55 |
| Zm00001d007820_P002 | Maize | plastid | 37.98 | 34.66 |
| KRH43403 | Soybean | cytosol | 22.68 | 31.32 |
| KRH37828 | Soybean | cytosol | 12.84 | 31.13 |
| KRH59552 | Soybean | cytosol | 22.13 | 29.78 |
| EER98072 | Sorghum | cytosol, plastid | 38.52 | 29.75 |
| KRH70457 | Soybean | cytosol | 21.58 | 25.65 |
| KRH01670 | Soybean | nucleus | 21.31 | 25.32 |
| KRH51155 | Soybean | cytosol | 20.49 | 25.25 |
| KRH21430 | Soybean | mitochondrion, nucleus | 20.77 | 25.17 |
| KRH10888 | Soybean | mitochondrion | 20.49 | 25.0 |
| KRH11519 | Soybean | mitochondrion | 21.04 | 24.68 |
| KRH50053 | Soybean | mitochondrion | 21.31 | 24.22 |
| KRH77753 | Soybean | cytosol | 17.76 | 23.9 |
| KRH36535 | Soybean | endoplasmic reticulum, golgi | 21.04 | 22.92 |
| KRH46613 | Soybean | mitochondrion, nucleus | 17.76 | 22.81 |
| KRH20449 | Soybean | mitochondrion | 20.49 | 22.8 |
| KRH07392 | Soybean | nucleus | 18.58 | 22.74 |
| KRH25597 | Soybean | nucleus | 17.76 | 22.65 |
| KRH27801 | Soybean | cytosol | 16.94 | 22.55 |
Protein Annotations
| EMBL:ACUP02000687 | EnsemblPlants:KRH69065 | EnsemblPlantsGene:GLYMA_02G001700 | EntrezGene:100780569 | InterPro:PDDEXK-like | PANTHER:PTHR31579 |
| PANTHER:PTHR31579:SF19 | PFAM:PF04720 | ProteinID:KRH69065 | ProteinID:KRH69065.1 | SEG:seg | TIGRFAMs:TIGR01615 |
| UniParc:UPI0002337234 | UniProt:I1JB50 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr2:-:203731..205720
Molecular Weight (calculated)
40064.8 Da
IEP (calculated)
6.989
GRAVY (calculated)
-0.384
Length
366 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPMKVQPIA IDIDSEKVKA TTAAVVVRNE SVLKSRLRRL FVFDRQLPKN NNKDAAEFEP SSLCLAKMVQ NFMEEQPPAP PKCGRNRCNC FNANSSDEDD
101: FDLFGAAPAP ESSNADATES LKSLIPCASV GERNLLAEVA RIVEKNGKSI KRKDDLRKVV AEALSSLGYD SSICKSKWEK TSSCPAGEYE FIDAIVEGER
201: LIVDVDFRSE FEIARSTGTY KAMLQSLPFI FVGNSERLTQ ILAIVSDAAK QSLKKKGMHV PPWRKRDYML AKWLSPSSIR EKENKQPPSS SVQAAAVPEM
301: VFSDNAASTT TESDCGELEL IFGGEMSPET ECGQVKSATT PAVKPKSVER GTKVVTGLAS LLKDKP
101: FDLFGAAPAP ESSNADATES LKSLIPCASV GERNLLAEVA RIVEKNGKSI KRKDDLRKVV AEALSSLGYD SSICKSKWEK TSSCPAGEYE FIDAIVEGER
201: LIVDVDFRSE FEIARSTGTY KAMLQSLPFI FVGNSERLTQ ILAIVSDAAK QSLKKKGMHV PPWRKRDYML AKWLSPSSIR EKENKQPPSS SVQAAAVPEM
301: VFSDNAASTT TESDCGELEL IFGGEMSPET ECGQVKSATT PAVKPKSVER GTKVVTGLAS LLKDKP
001: MPFTMKIQPI DIDSSPTVAR AESGNKPVLK SRLKRLFDRP FTNVLRNSTT TTTEKPFVVT GGEVQCGGVV TEFEPSSVCL AKMVQNFIEE NNEKQAKCGR
101: NRCNCFNGNN DGSSDDESDL FGGSIDGCDA SDHLKSLIPC TTVGERNLLA DAAKIVDKNK SVKRKDDMKK IVNEGLLSLN YNSSICKSKW DKSPSFPAGE
201: YEYIDVIIGE ERLIIDVDFR SEFDIARQTS GYKVLLQSLP FIFVGKSDRL SQIVFLISEA AKQSLKKKGM PFPPWRKAEY MRSKWLSSYT RASVVVVDET
301: VTVTDVTAAD AAVEKEVDSV EIELVFEEKC LSPRVIVNSS SSPTDGDDDV AVEREVKAVT GLASLFKEKP
101: NRCNCFNGNN DGSSDDESDL FGGSIDGCDA SDHLKSLIPC TTVGERNLLA DAAKIVDKNK SVKRKDDMKK IVNEGLLSLN YNSSICKSKW DKSPSFPAGE
201: YEYIDVIIGE ERLIIDVDFR SEFDIARQTS GYKVLLQSLP FIFVGKSDRL SQIVFLISEA AKQSLKKKGM PFPPWRKAEY MRSKWLSSYT RASVVVVDET
301: VTVTDVTAAD AAVEKEVDSV EIELVFEEKC LSPRVIVNSS SSPTDGDDDV AVEREVKAVT GLASLFKEKP
Arabidopsis Description
At3g22970 [Source:UniProtKB/TrEMBL;Acc:Q9LIJ8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.