CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50053	Soybean	mitochondrion	88.15	90.06
KRH10888	Soybean	mitochondrion	61.4	67.33
KRH21430	Soybean	mitochondrion, nucleus	59.88	65.23
VIT_00s0265g00090.t01	Wine grape	mitochondrion	53.5	56.96
Solyc03g006410.2.1	Tomato	cytosol	48.33	52.3
PGSC0003DMT400076442	Potato	nucleus	47.42	51.66
PGSC0003DMT400033381	Potato	cytosol, mitochondrion, nucleus	47.11	50.65
Solyc02g078150.2.1	Tomato	nucleus	47.11	50.32
Solyc02g078160.2.1	Tomato	nucleus	45.29	49.34
GSMUA_Achr7P24960_001	Banana	cytosol	38.91	46.72
GSMUA_Achr3P31780_001	Banana	cytosol	40.43	46.34
KRH25597	Soybean	nucleus	40.43	46.34
EES01469	Sorghum	nucleus	37.69	43.97
GSMUA_Achr4P02600_001	Banana	nucleus	36.78	43.53
Zm00001d043444_P001	Maize	nucleus	37.39	43.31
HORVU3Hr1G071220.1	Barley	nucleus	34.35	43.13
TraesCS3B01G307800.1	Wheat	nucleus	34.65	40.86
TraesCS3A01G274100.1	Wheat	nucleus	34.04	40.14
TraesCS3D01G273300.1	Wheat	nucleus	33.74	40.07
HORVU1Hr1G076120.1	Barley	nucleus	32.22	37.72
EES19824	Sorghum	cytosol	34.04	37.21
TraesCS1A01G339700.1	Wheat	cytosol	31.91	36.08
TraesCS1B01G352000.1	Wheat	nucleus	31.31	36.01
Os05t0519300-01	Rice	cytosol	33.13	35.62
TraesCS1D01G341700.1	Wheat	cytosol	31.31	35.52
KRH27801	Soybean	cytosol	24.01	28.73
KRH37828	Soybean	cytosol	13.07	28.48
KRH77753	Soybean	cytosol	23.1	27.94
KRH43403	Soybean	cytosol	18.84	23.4
KRH59552	Soybean	cytosol	19.15	23.16
KRH07392	Soybean	nucleus	19.76	21.74
KRH51155	Soybean	cytosol	18.54	20.54
KRH69065	Soybean	cytosol	22.8	20.49
KRH31637	Soybean	cytosol	23.1	19.84
KRH11519	Soybean	mitochondrion	18.54	19.55
KRH36535	Soybean	endoplasmic reticulum, golgi	19.76	19.35
KRH71351	Soybean	cytosol	20.97	19.22
KRG95606	Soybean	cytosol	20.97	19.11
KRH46613	Soybean	mitochondrion, nucleus	16.41	18.95
KRH32089	Soybean	cytosol	19.45	18.88
KRH34359	Soybean	plastid	21.88	18.6
KRG92439	Soybean	plastid	21.58	18.07
KRH01670	Soybean	nucleus	16.41	17.53
KRH70457	Soybean	cytosol	16.41	17.53

Protein Annotations

EMBL:ACUP02008265	EnsemblPlants:KRH20449	EnsemblPlantsGene:GLYMA_13G179200	EntrezGene:100779411	InterPro:PDDEXK-like	PANTHER:PTHR31579
PANTHER:PTHR31579:SF2	PFAM:PF04720	ProteinID:KRH20449	ProteinID:KRH20449.1	SEG:seg	TIGRFAMs:TIGR01615
UniParc:UPI0001B637EE	UniProt:A0A0R0GQ75	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:29274535..29277271

Molecular Weight (calculated)

37498.0 Da

IEP (calculated)

6.971

GRAVY (calculated)

-0.533

Length

329 amino acids

Sequence
(BLAST)

001: MGATSMVRGG VTRFLPRRES LGCEKLQLGV GDVEFEFLDD GEMMMSLVKS DESSGDEFRQ SNEMELDDDD DGERVDGGSV EENRSFWDNQ HQLLQNYLYR
101: STSIESRIRN ATKEAVQEIQ NAEIVCSCSR QIISRSCRNC FIIEVSRRLQ NSGYNSAICK TKWRSSPSNI PSGEHTFLDV IDSTSKKQEV RVIIELNFRA
201: EFEMARASEE YNGLVSKLPE VYVGKIERLS NIIKVLCMGA KKCMKENKMH MGPWRKHKYM QAKWLGSCKR NTSTTTSSLN SMMGYSEVVM PKPKPRASLL
301: TVDLMLENNN FKTEMLKLPN MHCTAVEVL

Best Arabidopsis Sequence Match ( AT2G20670.1 )
(BLAST)

001: MDRQNSDDIM RFLDGMASSD DVLFGFLDEG NQSPEDFSVN LNAGEDDGDE DDNNNNSEDN KAFWQEHEQL LQGTLYRTSS IETKIRQATK EALKQVKSKG
101: LYCVCRRPVD GGCRSCLRGE ISRHLRDVAG YDCVISKSKW RSCQDIPAGE HEFIEIVDRS GSKKSEMRVV IELSFRAEFE IAKGSEEYKR LISRLPEVYV
201: GKTERLRSLI KILCIAGKKC LRDKKMHMAP WRKHKYMQAK WLGTCDRSSS LEASVSEAME PENWVPVAKP RVSMLNYDGL LGGFSAGPAT VAVV

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9SIU5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.