CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH10888	Soybean	mitochondrion	87.09	87.67
KRH50053	Soybean	mitochondrion	65.23	61.18
KRH20449	Soybean	mitochondrion	65.23	59.88
VIT_00s0265g00090.t01	Wine grape	mitochondrion	57.95	56.63
PGSC0003DMT400076442	Potato	nucleus	50.66	50.66
Solyc02g078150.2.1	Tomato	nucleus	50.33	49.35
PGSC0003DMT400033381	Potato	cytosol, mitochondrion, nucleus	50.0	49.35
Solyc03g006410.2.1	Tomato	cytosol	49.34	49.01
Solyc02g078160.2.1	Tomato	nucleus	48.68	48.68
KRH25597	Soybean	nucleus	45.03	47.39
GSMUA_Achr7P24960_001	Banana	cytosol	41.06	45.26
GSMUA_Achr4P02600_001	Banana	nucleus	40.07	43.53
GSMUA_Achr3P31780_001	Banana	cytosol	40.4	42.51
EES01469	Sorghum	nucleus	39.07	41.84
HORVU3Hr1G071220.1	Barley	nucleus	35.76	41.22
Zm00001d043444_P001	Maize	nucleus	38.74	41.2
TraesCS3B01G307800.1	Wheat	nucleus	36.09	39.07
TraesCS3A01G274100.1	Wheat	nucleus	35.43	38.35
TraesCS3D01G273300.1	Wheat	nucleus	35.1	38.27
HORVU1Hr1G076120.1	Barley	nucleus	34.11	36.65
TraesCS1D01G341700.1	Wheat	cytosol	34.77	36.21
TraesCS1B01G352000.1	Wheat	nucleus	33.77	35.66
TraesCS1A01G339700.1	Wheat	cytosol	34.11	35.4
Os05t0519300-01	Rice	cytosol	35.76	35.29
EES19824	Sorghum	cytosol	34.44	34.55
KRH27801	Soybean	cytosol	24.17	26.55
KRH77753	Soybean	cytosol	23.18	25.74
KRH37828	Soybean	cytosol	12.25	24.5
KRH43403	Soybean	cytosol	19.21	21.89
KRH59552	Soybean	cytosol	19.54	21.69
KRH69065	Soybean	cytosol	25.17	20.77
KRH07392	Soybean	nucleus	20.53	20.74
KRH31637	Soybean	cytosol	25.17	19.84
KRH46613	Soybean	mitochondrion, nucleus	18.54	19.65
KRH51155	Soybean	cytosol	18.87	19.19
KRH70457	Soybean	cytosol	19.54	19.16
KRG95606	Soybean	cytosol	22.85	19.11
KRH01670	Soybean	nucleus	19.21	18.83
KRH36535	Soybean	endoplasmic reticulum, golgi	20.86	18.75
KRH71351	Soybean	cytosol	22.19	18.66
KRH11519	Soybean	mitochondrion	19.21	18.59
KRH34359	Soybean	plastid	23.18	18.09
KRH32089	Soybean	cytosol	20.2	17.99
KRG92439	Soybean	plastid	23.18	17.81

Protein Annotations

EMBL:ACUP02008354	EnsemblPlants:KRH21430	EnsemblPlantsGene:GLYMA_13G238500	InterPro:PDDEXK-like	PANTHER:PTHR31579	PANTHER:PTHR31579:SF2
PFAM:PF04720	ProteinID:KRH21430	ProteinID:KRH21430.1	TIGRFAMs:TIGR01615	UniParc:UPI0001B637E9	UniProt:A0A0R4J4Y9
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:34884907..34887253

Molecular Weight (calculated)

34727.4 Da

IEP (calculated)

7.864

GRAVY (calculated)

-0.665

Length

302 amino acids

Sequence
(BLAST)

001: MGPTSMAAGR VTRFLARHYP LEHHRDNADV EFDFLDDIGE ALLAQSASSD ECGHPNEMEE QFDQDEDHRD TVEENRTFWD KQHQLLQASI CRTSSSESRI
101: RHATKEALQE IQSAETVCGC GRQVAVITTC RNCLMREVSR RLQKAGYDSA ICKTKWRSSP DIPSGEHNFL DVIDSTKKGE VRVIVELNFR GEFEMARGSE
201: DYNRLVRRLP EVFVGKVERL SNLIKILCMG AKRCMKEKKM HMGPWRKHRY MQAKWLGPCE RNTSTTSLSV RYNSERILPR PKASMLTVDL LEKPSQYALH
301: CC

Best Arabidopsis Sequence Match ( AT4G32480.1 )
(BLAST)

001: MDRQSSDDIM KFLDGMASSD DVLFGFLDEG NHSPEDYNFA AGDESEVDND TTDCNSEENR KFWQEHEQLL QATLYRTSSI ETKIRQATKE ALKVVRSKGL
101: VCVCRRPVTD GCRSCLRGEV SSLLREAGYD CVISKSKWRS SHEIPAGEHE YLEVVDKSVS KKGEIRVVIE LCFRAEFEMA RGSEEYKRLI GMLPEVYVGK
201: TERLKSLIKI LCTAAKKCMK DKKMHMGPWR KHKYMQAKWF GTCERKSVSP VSETEENMFP VAKQRVSMLN YGLFGAGIGR PTVVAVV

Arabidopsis Description

AT4g32480/F8B4_180 [Source:UniProtKB/TrEMBL;Acc:Q9SUU4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.