CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
peroxisome 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH37828	Soybean	cytosol	30.64	60.26
KRH11519	Soybean	mitochondrion	61.28	58.33
KRH36535	Soybean	endoplasmic reticulum, golgi	63.97	56.55
Solyc11g012120.1.1	Tomato	cytosol	45.12	45.12
AT1G12030.1	Thale cress	mitochondrion	42.09	42.37
VIT_12s0059g01640.t01	Wine grape	nucleus	42.76	42.19
CDY30048	Canola	mitochondrion	40.4	40.68
CDY53353	Canola	mitochondrion	40.07	40.61
CDY31234	Canola	cytosol	40.07	40.48
Bra016797.1-P	Field mustard	cytosol	40.07	40.34
CDY21027	Canola	cytosol	40.07	40.34
Bra019736.1-P	Field mustard	mitochondrion	39.39	39.93
AT1G62420.1	Thale cress	cytosol	35.69	37.46
GSMUA_Achr3P03980_001	Banana	cytosol	27.61	28.57
KRH07392	Soybean	nucleus	27.61	27.42
EES07354	Sorghum	cytosol	27.61	26.54
TraesCS6A01G283100.1	Wheat	cytosol	25.93	24.76
TraesCS6D01G263600.1	Wheat	cytosol	26.6	24.69
Zm00001d051691_P001	Maize	cytosol	25.93	24.52
Os02t0720400-00	Rice	nucleus	26.26	23.57
KRH59552	Soybean	cytosol	21.55	23.53
KRH46613	Soybean	mitochondrion, nucleus	22.56	23.51
KRH71351	Soybean	cytosol	28.28	23.4
KRH43403	Soybean	cytosol	20.88	23.4
KRH70457	Soybean	cytosol	24.24	23.38
KRH77753	Soybean	cytosol	21.21	23.16
KRH01670	Soybean	nucleus	23.91	23.05
KRH27801	Soybean	cytosol	20.2	21.82
KRH25597	Soybean	nucleus	20.88	21.6
KRH32089	Soybean	cytosol	24.58	21.53
KRG95606	Soybean	cytosol	25.93	21.33
KRH69065	Soybean	cytosol	25.25	20.49
KRG92439	Soybean	plastid	26.6	20.1
KRH34359	Soybean	plastid	25.93	19.9
KRH10888	Soybean	mitochondrion	19.87	19.67
KRH21430	Soybean	mitochondrion, nucleus	19.19	18.87
KRH31637	Soybean	cytosol	24.24	18.8
KRH20449	Soybean	mitochondrion	20.54	18.54
KRH50053	Soybean	mitochondrion	19.87	18.32

Protein Annotations

EMBL:ACUP02004729	EnsemblPlants:KRH51155	EnsemblPlantsGene:GLYMA_07G265000	EntrezGene:100800496	InterPro:PDDEXK-like	PANTHER:PTHR31579
PANTHER:PTHR31579:SF15	PFAM:PF04720	ProteinID:KRH51155	ProteinID:KRH51155.1	SEG:seg	TIGRFAMs:TIGR01615
UniParc:UPI000233905F	UniProt:I1KNI6	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:43909125..43910552

Molecular Weight (calculated)

33833.0 Da

IEP (calculated)

5.031

GRAVY (calculated)

-0.460

Length

297 amino acids

Sequence
(BLAST)

001: MGRTPVRFER VAAAFDADVA RVRLCNSSEN EQHSPEDSAD LSDLVKSFME RGGEGEDAVG VRSDDGVENF DSEKREILEG IFDDDDGDAK EKIRREVQLA
101: WGLVAEKDNS SPQFKQQLMS LLRYRGFDAG LCKCKWEKNT RFPAGDYEYI DVNFAGNRYI VEISLVTEFE IARSTDQYAA LLDVFPLIFV GKMEELKQVV
201: RLMCTAIKGS MKSMNMYIPP WRRIGYMQAK WFSSYKRITD EVATNRASSA FFTTRSIGFD ARPVKSYNCR DDYGTKPAFR VCHLTTAFYV DSPGMQL

Best Arabidopsis Sequence Match ( AT1G12030.1 )
(BLAST)

001: MVEIGGRFIR TAAAFDVAAA RARPPCASSS GSDHSPDDTE DLWDLVESFI DREVETLPED AFQEEEDDKS DEDYEDVKER LREILENHGG EERQRIMDEA
101: VNASRVFAGE KRHFMAYLRN KGFDAGLCKS RWEKFGKNTA GKYEYVDVKA GDKNRYIVET NLAGEFEIAR PTTRYLSVLA QVPRVFVGTP EELKQLVRIM
201: CFEIRRSMKR ADIFVPPWRR NGYMQAKWFG HYKRTSNEVV SRVKSCGCGP RVGFEESVKM TTFNGFKDGE MRRSGLKVGQ LTVAFNGSEV GLQIF

Arabidopsis Description

At1g12030 [Source:UniProtKB/TrEMBL;Acc:O65376]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.