Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21027 | Canola | cytosol | 95.58 | 95.25 |
| Bra016797.1-P | Field mustard | cytosol | 95.24 | 94.92 |
| CDY53353 | Canola | mitochondrion | 80.27 | 80.55 |
| CDY30048 | Canola | mitochondrion | 79.25 | 78.98 |
| AT1G12030.1 | Thale cress | mitochondrion | 77.21 | 76.95 |
| KRH51155 | Soybean | cytosol | 40.48 | 40.07 |
| KRH11519 | Soybean | mitochondrion | 42.52 | 40.06 |
| Solyc11g012120.1.1 | Tomato | cytosol | 40.14 | 39.73 |
| KRH36535 | Soybean | endoplasmic reticulum, golgi | 43.2 | 37.8 |
| VIT_12s0059g01640.t01 | Wine grape | nucleus | 37.76 | 36.88 |
| GSMUA_Achr3P03980_001 | Banana | cytosol | 29.25 | 29.97 |
| EES07354 | Sorghum | cytosol | 31.29 | 29.77 |
| TraesCS6A01G283100.1 | Wheat | cytosol | 29.59 | 27.97 |
| TraesCS6D01G263600.1 | Wheat | cytosol | 29.59 | 27.19 |
| Zm00001d051691_P001 | Maize | cytosol | 28.91 | 27.07 |
| CDY35924 | Canola | nucleus | 27.55 | 27.0 |
| CDY28060 | Canola | cytosol, nucleus, plastid | 27.21 | 26.67 |
| CDY15101 | Canola | nucleus | 25.17 | 26.62 |
| CDY52283 | Canola | nucleus | 25.51 | 26.6 |
| CDY60822 | Canola | nucleus | 26.87 | 26.42 |
| CDY34904 | Canola | nucleus | 26.53 | 25.83 |
| Os02t0720400-00 | Rice | nucleus | 28.91 | 25.68 |
| CDX87538 | Canola | nucleus | 21.09 | 24.12 |
| CDX88346 | Canola | nucleus | 20.75 | 23.74 |
| CDX88344 | Canola | cytosol | 20.75 | 23.02 |
| CDY18366 | Canola | cytosol | 22.79 | 22.33 |
| CDX87539 | Canola | nucleus | 20.07 | 22.01 |
| CDX88345 | Canola | nucleus | 20.07 | 22.01 |
| CDX87540 | Canola | cytosol | 19.39 | 21.67 |
| CDX93300 | Canola | cytosol | 22.11 | 21.67 |
| CDY31947 | Canola | nucleus | 21.09 | 20.88 |
| CDY29898 | Canola | nucleus | 20.75 | 20.68 |
| CDY14428 | Canola | cytosol | 21.77 | 20.58 |
| CDY05782 | Canola | nucleus | 20.75 | 20.54 |
| CDY07696 | Canola | cytosol | 21.77 | 20.51 |
| CDX92863 | Canola | nucleus | 20.41 | 20.34 |
| CDY18979 | Canola | nucleus | 19.73 | 19.4 |
| CDY13861 | Canola | nucleus | 19.39 | 19.26 |
| CDX81975 | Canola | nucleus | 19.39 | 19.26 |
| CDX92970 | Canola | cytosol | 21.77 | 19.22 |
| CDY29750 | Canola | nucleus, plastid | 23.13 | 19.21 |
| CDY24955 | Canola | cytosol | 19.73 | 19.21 |
| CDY49659 | Canola | nucleus | 19.39 | 19.06 |
| CDY07644 | Canola | cytosol | 19.39 | 18.94 |
| CDY16266 | Canola | nucleus | 22.79 | 18.77 |
| CDX94877 | Canola | cytosol | 21.43 | 18.16 |
| CDY10330 | Canola | cytosol | 22.11 | 17.76 |
| CDY10329 | Canola | plastid | 21.77 | 16.93 |
Protein Annotations
| EnsemblPlants:CDY31234 | EnsemblPlantsGene:GSBRNA2T00047372001 | InterPro:PDDEXK-like | PANTHER:PTHR31579 | PANTHER:PTHR31579:SF15 | PFAM:PF04720 |
| ProteinID:CDY31234 | ProteinID:CDY31234.1 | SEG:seg | TIGRFAMs:TIGR01615 | UniParc:UPI0004EE1311 | UniProt:A0A078H1B0 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC08g15290DBnaC08g15290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H1B0]
Coordinates
chrLK032269:-:128759..130366
Molecular Weight (calculated)
33828.4 Da
IEP (calculated)
8.103
GRAVY (calculated)
-0.556
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MVEIPRRFNI LAAAFDVEAA RARPPCDSSS GSDHFPYETA DLWDLVESFM DSEVKALPED FPVEDKDDKS DVDDDYEDVK ERLREICENL GRGGERRRII
101: EEVVNASEFV GEKRLLMAYL RDKGFDAGLC KSKWERFGKN TAGKYEYVDV NRGDKNRFIV ETNLASEFEI AKPTTRYLYL LAQLPRVFMG TPEELKKLVR
201: IMCFEIRRSM KRAEIHVPPW RRNAYMQAKW FGHYKRTSNE VVTRVKSCGC GPRVGFEGLV KTATLNGYKE VERKMHGLRV GQLTVAFNGS GVRL
101: EEVVNASEFV GEKRLLMAYL RDKGFDAGLC KSKWERFGKN TAGKYEYVDV NRGDKNRFIV ETNLASEFEI AKPTTRYLYL LAQLPRVFMG TPEELKKLVR
201: IMCFEIRRSM KRAEIHVPPW RRNAYMQAKW FGHYKRTSNE VVTRVKSCGC GPRVGFEGLV KTATLNGYKE VERKMHGLRV GQLTVAFNGS GVRL
001: MVEIGGRFIR TAAAFDVAAA RARPPCASSS GSDHSPDDTE DLWDLVESFI DREVETLPED AFQEEEDDKS DEDYEDVKER LREILENHGG EERQRIMDEA
101: VNASRVFAGE KRHFMAYLRN KGFDAGLCKS RWEKFGKNTA GKYEYVDVKA GDKNRYIVET NLAGEFEIAR PTTRYLSVLA QVPRVFVGTP EELKQLVRIM
201: CFEIRRSMKR ADIFVPPWRR NGYMQAKWFG HYKRTSNEVV SRVKSCGCGP RVGFEESVKM TTFNGFKDGE MRRSGLKVGQ LTVAFNGSEV GLQIF
101: VNASRVFAGE KRHFMAYLRN KGFDAGLCKS RWEKFGKNTA GKYEYVDVKA GDKNRYIVET NLAGEFEIAR PTTRYLSVLA QVPRVFVGTP EELKQLVRIM
201: CFEIRRSMKR ADIFVPPWRR NGYMQAKWFG HYKRTSNEVV SRVKSCGCGP RVGFEESVKM TTFNGFKDGE MRRSGLKVGQ LTVAFNGSEV GLQIF
Arabidopsis Description
At1g12030 [Source:UniProtKB/TrEMBL;Acc:O65376]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.