CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

nucleus 2
plasma membrane 4
extracellular 3
endoplasmic reticulum 4
vacuole 3
golgi 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH11519	Soybean	mitochondrion	82.14	88.46
KRH37828	Soybean	cytosol	38.39	85.43
KRH51155	Soybean	cytosol	56.55	63.97
VIT_12s0059g01640.t01	Wine grape	nucleus	44.35	49.5
Solyc11g012120.1.1	Tomato	cytosol	43.15	48.82
AT1G12030.1	Thale cress	mitochondrion	38.69	44.07
CDY53353	Canola	mitochondrion	38.39	44.03
CDY30048	Canola	mitochondrion	38.39	43.73
Bra019736.1-P	Field mustard	mitochondrion	37.8	43.34
CDY31234	Canola	cytosol	37.8	43.2
Bra016797.1-P	Field mustard	cytosol	37.8	43.05
CDY21027	Canola	cytosol	37.8	43.05
AT1G62420.1	Thale cress	cytosol	36.01	42.76
GSMUA_Achr3P03980_001	Banana	cytosol	26.79	31.36
KRH07392	Soybean	nucleus	27.38	30.77
EES07354	Sorghum	cytosol	25.0	27.18
TraesCS6A01G283100.1	Wheat	cytosol	24.7	26.69
TraesCS6D01G263600.1	Wheat	cytosol	25.0	26.25
Zm00001d051691_P001	Maize	cytosol	23.81	25.48
Os02t0720400-00	Rice	nucleus	25.0	25.38
KRH77753	Soybean	cytosol	20.54	25.37
KRH46613	Soybean	mitochondrion, nucleus	21.43	25.26
KRH01670	Soybean	nucleus	21.73	23.7
KRH70457	Soybean	cytosol	21.73	23.7
KRH43403	Soybean	cytosol	18.45	23.4
KRH27801	Soybean	cytosol	19.05	23.27
KRH59552	Soybean	cytosol	18.75	23.16
KRH10888	Soybean	mitochondrion	19.94	22.33
KRH71351	Soybean	cytosol	23.81	22.28
KRH69065	Soybean	cytosol	22.92	21.04
KRH21430	Soybean	mitochondrion, nucleus	18.75	20.86
KRH32089	Soybean	cytosol	20.83	20.65
KRG92439	Soybean	plastid	24.11	20.61
KRH25597	Soybean	nucleus	17.56	20.56
KRG95606	Soybean	cytosol	22.02	20.5
KRH34359	Soybean	plastid	23.51	20.41
KRH50053	Soybean	mitochondrion	19.05	19.88
KRH20449	Soybean	mitochondrion	19.35	19.76
KRH31637	Soybean	cytosol	22.32	19.58

Protein Annotations

EMBL:ACUP02005380	EnsemblPlants:KRH36535	EnsemblPlantsGene:GLYMA_09G009700	EntrezGene:100811764	InterPro:PDDEXK-like	PANTHER:PTHR31579
PANTHER:PTHR31579:SF15	PFAM:PF04720	ProteinID:KRH36535	ProteinID:KRH36535.1	SEG:seg	TIGRFAMs:TIGR01615
UniParc:UPI000296E2C7	UniProt:K7LB65	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:763567..765734

Molecular Weight (calculated)

38538.1 Da

IEP (calculated)

7.890

GRAVY (calculated)

-0.505

Length

336 amino acids

Sequence
(BLAST)

001: MFIKKLIKFL KVVWCILHNN TLIDMARIPV RFQRVAAAFD ADVARVRLCE SSGSEHSPES LTDLSDLVKS FMEKNETTTT GEKEEEEEEG GGVHEEELEK
101: TEWSDSEKRE MLQSFLYGKE DETDEDERDA KEKIRREVEV AFGLVGNNYK RRLISLLREK GFDAGLCKSK WEKNGRLTAG DYEYIDVNFK GKRYIVEISL
201: AGEFEIARPT DQYSSLLDVF PLIFVGKVEE MKQVVRLMCT AIKGSMKRMK LHIPPWRRNV YMQAKWFGAY KRTTNAVATK RVSLPLSSDE SLFPKRSIGF
301: EVRPVKAHKC RDVYATNTGF RTGHLTAVFN SDSLGA

Best Arabidopsis Sequence Match ( AT1G12030.1 )
(BLAST)

001: MVEIGGRFIR TAAAFDVAAA RARPPCASSS GSDHSPDDTE DLWDLVESFI DREVETLPED AFQEEEDDKS DEDYEDVKER LREILENHGG EERQRIMDEA
101: VNASRVFAGE KRHFMAYLRN KGFDAGLCKS RWEKFGKNTA GKYEYVDVKA GDKNRYIVET NLAGEFEIAR PTTRYLSVLA QVPRVFVGTP EELKQLVRIM
201: CFEIRRSMKR ADIFVPPWRR NGYMQAKWFG HYKRTSNEVV SRVKSCGCGP RVGFEESVKM TTFNGFKDGE MRRSGLKVGQ LTVAFNGSEV GLQIF

Arabidopsis Description

At1g12030 [Source:UniProtKB/TrEMBL;Acc:O65376]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.