Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G07350.1 | KRH24006 | AT3G48150.1 | 21798944 |
| AT3G07350.1 | KRH27971 | AT3G48150.1 | 21798944 |
| AT3G07350.1 | KRH29310 | AT3G48150.1 | 21798944 |
| AT3G07350.1 | KRH77487 | AT3G48150.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH46613 | Soybean | mitochondrion, nucleus | 47.16 | 49.47 |
| VIT_00s0337g00040.t01 | Wine grape | cytosol | 44.15 | 46.81 |
| Bra040373.1-P | Field mustard | plastid | 29.43 | 45.83 |
| Solyc06g007580.1.1 | Tomato | nucleus | 44.48 | 44.48 |
| Solyc06g083160.1.1 | Tomato | nucleus | 43.48 | 44.37 |
| AT3G07350.1 | Thale cress | nucleus | 44.15 | 44.3 |
| Bra029641.1-P | Field mustard | nucleus | 43.81 | 43.67 |
| CDY35924 | Canola | nucleus | 43.81 | 43.67 |
| PGSC0003DMT400053173 | Potato | nucleus | 43.14 | 43.14 |
| PGSC0003DMT400051812 | Potato | nucleus | 42.81 | 43.1 |
| AT3G25240.1 | Thale cress | cytosol | 40.47 | 43.06 |
| CDY28060 | Canola | cytosol, nucleus, plastid | 43.14 | 43.0 |
| CDY60822 | Canola | nucleus | 42.81 | 42.81 |
| CDY52283 | Canola | nucleus | 40.13 | 42.55 |
| CDY15101 | Canola | nucleus | 39.46 | 42.45 |
| Bra013223.1-P | Field mustard | nucleus | 39.8 | 42.2 |
| CDY34904 | Canola | nucleus | 42.47 | 42.05 |
| PGSC0003DMT400008686 | Potato | cytosol | 35.45 | 38.69 |
| GSMUA_Achr6P21070_001 | Banana | cytosol | 32.78 | 32.89 |
| Zm00001d012069_P001 | Maize | mitochondrion | 30.43 | 31.6 |
| EES04096 | Sorghum | cytosol | 31.1 | 31.42 |
| TraesCS4D01G188800.1 | Wheat | mitochondrion | 31.1 | 31.1 |
| HORVU4Hr1G054810.1 | Barley | mitochondrion | 30.43 | 31.06 |
| Os11t0437600-01 | Rice | plastid | 31.44 | 30.72 |
| Os01t0915000-01 | Rice | cytosol | 30.1 | 30.72 |
| TraesCS3B01G456400.1 | Wheat | cytosol | 29.43 | 30.56 |
| TraesCS3D01G416400.1 | Wheat | cytosol | 29.43 | 30.14 |
| Zm00001d042376_P001 | Maize | cytosol | 29.43 | 29.93 |
| TraesCS4B01G187500.1 | Wheat | mitochondrion | 29.77 | 29.77 |
| TraesCS3A01G420900.1 | Wheat | cytosol | 28.76 | 29.66 |
| KRH11519 | Soybean | mitochondrion | 30.77 | 29.49 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion | 20.4 | 29.33 |
| KRH37828 | Soybean | cytosol | 14.72 | 29.14 |
| Solyc09g057760.2.1 | Tomato | nucleus | 20.74 | 28.7 |
| TraesCS4A01G116900.1 | Wheat | plastid | 30.77 | 28.22 |
| KRH51155 | Soybean | cytosol | 27.42 | 27.61 |
| KRH36535 | Soybean | endoplasmic reticulum, golgi | 30.77 | 27.38 |
| KRH43403 | Soybean | cytosol | 20.74 | 23.4 |
| KRH59552 | Soybean | cytosol | 21.07 | 23.16 |
| HORVU3Hr1G093260.1 | Barley | plastid | 30.77 | 22.72 |
| KRH01670 | Soybean | nucleus | 22.74 | 22.08 |
| KRH10888 | Soybean | mitochondrion | 22.07 | 22.0 |
| KRH70457 | Soybean | cytosol | 22.41 | 21.75 |
| KRH21430 | Soybean | mitochondrion, nucleus | 20.74 | 20.53 |
| KRG95606 | Soybean | cytosol | 24.41 | 20.22 |
| KRH50053 | Soybean | mitochondrion | 21.4 | 19.88 |
| KRH71351 | Soybean | cytosol | 23.75 | 19.78 |
| KRH20449 | Soybean | mitochondrion | 21.74 | 19.76 |
| KRH32089 | Soybean | cytosol | 21.74 | 19.17 |
| KRH34359 | Soybean | plastid | 24.41 | 18.86 |
| KRH69065 | Soybean | cytosol | 22.74 | 18.58 |
| KRG92439 | Soybean | plastid | 24.41 | 18.58 |
| KRH25597 | Soybean | nucleus | 17.73 | 18.47 |
| KRH31637 | Soybean | cytosol | 22.41 | 17.49 |
| KRH27801 | Soybean | cytosol | 15.38 | 16.73 |
| KRH77753 | Soybean | cytosol | 14.72 | 16.18 |
Protein Annotations
| EMBL:ACUP02009977 | EnsemblPlants:KRH07392 | EnsemblPlantsGene:GLYMA_16G085600 | EntrezGene:100805677 | InterPro:PDDEXK-like | PANTHER:PTHR31579 |
| PANTHER:PTHR31579:SF4 | PFAM:PF04720 | ProteinID:KRH07392 | ProteinID:KRH07392.1 | TIGRFAMs:TIGR01615 | UniParc:UPI000233E4BE |
| UniProt:I1MM76 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr16:-:10120976..10122362
Molecular Weight (calculated)
33598.3 Da
IEP (calculated)
6.601
GRAVY (calculated)
-0.512
Length
299 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVLARKKRV TDPFDDEAKA RLVGGGDHRQ LSYVSSGSEH SGNGDGHSPC LSELVHDFLE DNGDSENNNS AGNEFDSERV DSVTDCIDSV EELLMLNASN
101: VSDSYKSLLL EHASEASEKF EFLKEGNVSS HRRNAMSFLR EKGHNAAICK TRWDSSGGVT AGNYEFIDVV QSGPATWHKR YFVDLDFVAQ FEIARPTSEY
201: LEFLNYVPRI FVGTEEELKR TVRVLCGVAR RCFGKRGLSL PPWRKNRYMQ NKWFGPYRRT ANPVHGNPVP TVVSALSGAK CRFVGFDDAF RRPDMAVWL
101: VSDSYKSLLL EHASEASEKF EFLKEGNVSS HRRNAMSFLR EKGHNAAICK TRWDSSGGVT AGNYEFIDVV QSGPATWHKR YFVDLDFVAQ FEIARPTSEY
201: LEFLNYVPRI FVGTEEELKR TVRVLCGVAR RCFGKRGLSL PPWRKNRYMQ NKWFGPYRRT ANPVHGNPVP TVVSALSGAK CRFVGFDDAF RRPDMAVWL
001: MGFSRAKRVT DPLAEEVRAR LVGCSFSSGS EHTGDGIEDY EDDDSPCLSD LVQGFLEDEV DTVDDESCWC DQDSGSDSDS DSELGELPDF ADDIAKLLRN
101: SLREDSYGRT VLVHVARAME MLSSLGSQPE QRAVFQRKVM SLLRELGHNA AICKTKWKSS GGLTAGNHEF IDVVYTPSAS SQSVRFIVDL DFSSRFQIAR
201: PTSQYARVLQ SLPAVFVGKG DDLKRILRLV CDAARISLRN RGLTLPPWRK NRYMQTRWLG PYKRTTNLTP STSGVDTVMC RAIGFDNAVG GRLFVRTR
101: SLREDSYGRT VLVHVARAME MLSSLGSQPE QRAVFQRKVM SLLRELGHNA AICKTKWKSS GGLTAGNHEF IDVVYTPSAS SQSVRFIVDL DFSSRFQIAR
201: PTSQYARVLQ SLPAVFVGKG DDLKRILRLV CDAARISLRN RGLTLPPWRK NRYMQTRWLG PYKRTTNLTP STSGVDTVMC RAIGFDNAVG GRLFVRTR
Arabidopsis Description
F21O3.6 protein [Source:UniProtKB/TrEMBL;Acc:Q9SRT1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.