CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0711400-01	Rice	mitochondrion	66.85	75.16
CDY28279	Canola	cytosol	6.63	54.55
Os06t0611900-01	Rice	mitochondrion	74.86	53.45
GSMUA_Achr8P05620_001	Banana	cytosol	15.19	51.4
HORVU3Hr1G051040.1	Barley	mitochondrion, peroxisome	9.67	40.23
KRH05459	Soybean	mitochondrion	81.49	27.94
VIT_11s0016g02280.t01	Wine grape	mitochondrion	75.97	27.67
GSMUA_Achr3P26310_001	Banana	mitochondrion	75.41	27.66
KRH15534	Soybean	mitochondrion	79.83	27.29
GSMUA_Achr1P14430_001	Banana	mitochondrion	72.93	27.02
KRH61504	Soybean	mitochondrion	76.8	26.96
KRH52197	Soybean	mitochondrion	75.41	26.69
PGSC0003DMT400076966	Potato	mitochondrion	75.69	26.47
Solyc08g065220.2.1	Tomato	plastid	75.69	26.45
TraesCS3A01G250200.1	Wheat	mitochondrion	74.31	26.09
AT2G26080.1	Thale cress	mitochondrion	74.86	25.96
AT4G33010.1	Thale cress	mitochondrion	74.31	25.94
TraesCS3D01G250600.1	Wheat	mitochondrion	73.76	25.9
TraesCS3B01G279700.1	Wheat	plastid	73.48	25.8
EES15687	Sorghum	mitochondrion	74.03	25.72
Zm00001d023437_P001	Maize	mitochondrion	74.03	25.72
Bra011405.1-P	Field mustard	mitochondrion	71.55	24.78
VIT_04s0008g01300.t01	Wine grape	mitochondrion	63.26	21.46

Protein Annotations

KEGG:00260+1.4.4.2	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:35.1	UniProt:A0A0R0FQ08	EMBL:ACUP02010744
ncoils:Coil	InterPro:GDC_P	EnsemblPlantsGene:GLYMA_17G226900	GO:GO:0003674	GO:GO:0003824	GO:GO:0004375
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006546
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0055114	InterPro:IPR015421
InterPro:IPR015422	EnsemblPlants:KRH05426	ProteinID:KRH05426	ProteinID:KRH05426.1	PANTHER:PTHR11773	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI0006EDDB13	:	:

Description

hypothetical protein

Coordinates

chr17:-:38161706..38164919

Molecular Weight (calculated)

39680.1 Da

IEP (calculated)

8.471

GRAVY (calculated)

-0.064

Length

362 amino acids

Sequence
(BLAST)

001: VPVSAHGSEG TNPADAAMCG IKIVSVGTEA KGKIDIEELR KICKIIHDNG GQVYMGGANL NALRNCSRGR LFRMILYYRR HIVHGTNFSL FFNLLQIMNV
101: QMFNLHKTFC IPHGGKCPGM GPISVKRHLA PFLPFTPSTG GIPAPDKHQP LVTIAAAPWG SALILPISYT YIAMMGSKGL TDASKIAILN ANYMAKRLEF
201: FNGTVAHEFI IDLRGFKNTA GIEPEDVAKR LMDYGFHAPT MSWPVPGTLM IEPTESESKA ELDRFCDALI SIRHEIAEIE KGNADINNNV LKSAPHPPSL
301: LMADAWTKPY SREYAAFPAP WLRASKFWPT TGRVDNVYGD RNLICTLLPA SQAVEEQAAA TA

Best Arabidopsis Sequence Match ( AT5G15190.1 )
(BLAST)

001: MMTMGGREAE SWPEMEAIAR KMVEEVETES SGSSEAETES PRSVGRWITA KEKVHNQVLK IREEDLCVLV EDKVTNPEDR RYLRPRRFNL FLISRQNLPC
101: SPLSGKGRSV NVVQTQ

Arabidopsis Description

At5g15190 [Source:UniProtKB/TrEMBL;Acc:Q8GW49]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.