Factsheet for GSMUA_Achr3P26310_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 8
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0711400-01	Rice	mitochondrion	29.08	89.13
Os06t0611900-01	Rice	mitochondrion	45.49	88.56
GSMUA_Achr1P14430_001	Banana	mitochondrion	87.23	88.13
PGSC0003DMT400076966	Potato	mitochondrion	83.49	79.61
Solyc08g065220.2.1	Tomato	plastid	83.18	79.25
KRH15534	Soybean	mitochondrion	84.19	78.47
KRH61504	Soybean	mitochondrion	81.97	78.47
KRH05459	Soybean	mitochondrion	83.89	78.41
VIT_11s0016g02280.t01	Wine grape	mitochondrion	78.93	78.37
KRH52197	Soybean	mitochondrion	80.95	78.1
TraesCS3A01G250200.1	Wheat	mitochondrion	81.46	77.98
AT2G26080.1	Thale cress	mitochondrion	82.37	77.87
AT4G33010.1	Thale cress	mitochondrion	81.76	77.82
TraesCS3B01G279700.1	Wheat	plastid	81.26	77.79
TraesCS3D01G250600.1	Wheat	mitochondrion	81.05	77.59
EES15687	Sorghum	mitochondrion	81.76	77.45
Zm00001d023437_P001	Maize	mitochondrion	81.05	76.78
CDX75316	Canola	mitochondrion	80.45	76.05
Bra011405.1-P	Field mustard	mitochondrion	80.45	75.98
CDX68930	Canola	mitochondrion	80.14	75.69
HORVU3Hr1G067110.2	Barley	vacuole	78.93	75.48
KRH05426	Soybean	peroxisome	27.66	75.41
VIT_04s0008g01300.t01	Wine grape	mitochondrion	79.13	73.2
CDY28279	Canola	cytosol	2.33	52.27
GSMUA_Achr8P05620_001	Banana	cytosol	5.37	49.53

Protein Annotations

KEGG:00260+1.4.4.2	MapMan:1.3.4.1	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	ncoils:Coil	InterPro:GDC_P
GO:GO:0003674	GO:GO:0003824	GO:GO:0004375	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006544	GO:GO:0006546	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr3G26310_001	EnsemblPlants:GSMUA_Achr3P26310_001
EnsemblPlants:GSMUA_Achr3T26310_001	InterPro:GcvP	InterPro:IPR015421	InterPro:IPR015422	UniProt:M0SHZ7	PFAM:PF02347
PANTHER:PTHR11773	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	TIGRFAMs:TIGR00461
UniParc:UPI000294AB3E	SEG:seg	:	:	:	:

Description

Glycine dehydrogenase [decarboxylating], mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr3G26310_001]

Coordinates

chr3:-:26198294..26206178

Molecular Weight (calculated)

106645.0 Da

IEP (calculated)

6.985

GRAVY (calculated)

-0.074

Length

987 amino acids

Sequence
(BLAST)

001: MERARKLASR GILRRLISQT NSSAPTPATT RHLSSLASSS VFPTGNSLLR PPAAADSLLR NGQYRSISVD ALRPSDTFPR RHNSATPDDQ STMAASCGFG
101: SLDALIDATV PKSIRIPDMK FAKFDGGLTE SEMIAHMSRL AAKNKVFKSF IGMGYYDTLV PAVILRNIME NPAWYTQYTP YQAEISQGRL ESLLNFQTMI
201: SDLTALPMSN ASLLDEGTAA AEAMAMAEGF DIKYPGTEGE ILDYGEFIKN AHAHGVKVVM ATDLLALTVL KPPGELGADI VVGSAQRFGV PMGYGGPHAA
301: FLATSQEYKR MMPGRIIGVS VDSSGKPALR MAMQTREQHI RRDKATSNIC TAQALLANMA AMYAVYHGPE GLKAIAQRVH GLSYAFASGL KKLGTVTVQD
401: LPFFDTVKVT CSDSKAIADE ACKHGMNLRV VDSNTITVSF DETTTLEDVD KLFKVFACGK PVNFTAESLA PEVQMAIPKG LVRGSPYLTH SIFNSYHTEH
501: ELLRYMYKLQ SRDLSLCHSM IPLGSCTMKL NATVEMMPVT WPSFANLHPF APADQSQGYQ EMFKDLGELL CTITGFDSFS LQPNAGASGE YAGLMVIRAY
601: HQSRGDHHRN VCIIPVSAHG TNPASAAMCG MKIVAVGTDS KGNINIEELR KAAEAHKENL SALMVTYPST HGVYEEGIDE ICKIIHDNGG QVYMDGANMN
701: AQVGLTSPGF IGADVCHLNL HKTFCIPHGG GGPGMGPIGV KKHLAPFLPS HPVVPTGGIP PPEKVQPLGT IAAAPWGSAL ILPISYTYIA MMGSKGLTDA
801: SKIAILNANY MAKRLENYYP ILFRGVNGTV AHEFIVDLRG FKATAGLEAE DVAKRLIDYG FHAPTMSWPV PGTLMIEPTE SESKAELDRF CDALISIREE
901: IAQIENGKAD ININVLKGAP HPPSLIMGDT WSKPYSREYA AFPAAWLRGA KFWPTTGRVD NVYGDRNLIC TLLPVSQMAE EAAAATA

Best Arabidopsis Sequence Match ( AT2G26080.1 )
(BLAST)

0001: MERARRLAYR GIVKRLVNET KRHRNGESSL LPTTTVTPSR YVSSVSSFLH RRRDVSGSAF TTSGRNQHQT RSISVDALKP SDTFPRRHNS ATPDEQAQMA
0101: NYCGFDNLNT LIDSTVPKSI RLDSMKFSGI FDEGLTESQM IEHMSDLASK NKVFKSFIGM GYYNTHVPPV ILRNIMENPA WYTQYTPYQA EISQGRLESL
0201: LNYQTVITDL TGLPMSNASL LDEGTAAAEA MAMCNNILKG KKKTFVIASN CHPQTIDVCK TRADGFDLKV VTVDIKDVDY SSGDVCGVLV QYPGTEGEVL
0301: DYGEFVKNAH ANGVKVVMAT DLLALTMLKP PGEFGADIVV GSGQRFGVPM GYGGPHAAFL ATSQEYKRMM PGRIIGVSVD SSGKQALRMA MQTREQHIRR
0401: DKATSNICTA QALLANMTAM YAVYHGPEGL KSIAQRVHGL AGVFALGLKK LGTAQVQDLP FFDTVKVTCS DATAIFDVAA KKEINLRLVD SNTITVAFDE
0501: TTTLDDVDKL FEVFASGKPV QFTAESLAPE FNNAIPSSLT RESPYLTHPI FNMYHTEHEL LRYIHKLQNK DLSLCHSMIP LGSCTMKLNA TTEMMPVTWP
0601: SFTNMHPFAP VEQAQGYQEM FTNLGELLCT ITGFDSFSLQ PNAGAAGEYA GLMVIRAYHM SRGDHHRNVC IIPVSAHGTN PASAAMCGMK IVAVGTDAKG
0701: NINIEELRNA AEANKDNLAA LMVTYPSTHG VYEEGIDEIC NIIHENGGQV YMDGANMNAQ VGLTSPGFIG ADVCHLNLHK TFCIPHGGGG PGMGPIGVKQ
0801: HLAPFLPSHP VIPTGGIPEP EQTSPLGTIS AAPWGSALIL PISYTYIAMM GSGGLTDASK IAILNANYMA KRLESHYPVL FRGVNGTVAH EFIIDLRGFK
0901: NTAGIEPEDV AKRLMDYGFH GPTMSWPVPG TLMIEPTESE SKAELDRFCD ALISIREEIS QIEKGNADPN NNVLKGAPHP PSLLMADTWK KPYSREYAAF
1001: PAPWLRSSKF WPTTGRVDNV YGDRNLVCTL QPANEEQAAA AVSA

Arabidopsis Description

GLDP2Glycine dehydrogenase (decarboxylating) 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O80988]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.