Factsheet for Bra011405.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 8
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75316	Canola	mitochondrion	98.95	99.04
AT4G33010.1	Thale cress	mitochondrion	89.57	90.26
Os01t0711400-01	Rice	mitochondrion	26.41	85.71
Os06t0611900-01	Rice	mitochondrion	40.86	84.22
PGSC0003DMT400076966	Potato	mitochondrion	81.91	82.71
Solyc08g065220.2.1	Tomato	plastid	80.48	81.18
KRH05459	Soybean	mitochondrion	81.63	80.78
GSMUA_Achr3P26310_001	Banana	mitochondrion	75.98	80.45
KRH15534	Soybean	mitochondrion	81.15	80.08
KRH52197	Soybean	mitochondrion	78.18	79.86
KRH61504	Soybean	mitochondrion	78.56	79.63
VIT_11s0016g02280.t01	Wine grape	mitochondrion	75.22	79.07
TraesCS3B01G279700.1	Wheat	plastid	77.61	78.66
TraesCS3A01G250200.1	Wheat	mitochondrion	77.42	78.47
TraesCS3D01G250600.1	Wheat	mitochondrion	77.32	78.37
EES15687	Sorghum	mitochondrion	77.8	78.02
GSMUA_Achr1P14430_001	Banana	mitochondrion	72.34	77.38
Zm00001d023437_P001	Maize	mitochondrion	77.13	77.35
VIT_04s0008g01300.t01	Wine grape	mitochondrion	77.03	75.45
KRH05426	Soybean	peroxisome	24.78	71.55
HORVU3Hr1G051040.1	Barley	mitochondrion, peroxisome	5.74	68.97
GSMUA_Achr8P05620_001	Banana	cytosol	4.69	45.79

Protein Annotations

KEGG:00260+1.4.4.2	MapMan:1.3.4.1	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	EnsemblPlantsGene:Bra011405	EnsemblPlants:Bra011405.1
EnsemblPlants:Bra011405.1-P	ncoils:Coil	InterPro:GDC_P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004375
GO:GO:0005575	GO:GO:0005576	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0006544	GO:GO:0006546	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009507
GO:GO:0009534	GO:GO:0009536	GO:GO:0009570	GO:GO:0009579	GO:GO:0009941	GO:GO:0009987
GO:GO:0016491	GO:GO:0046686	GO:GO:0048046	GO:GO:0055114	InterPro:GcvP	InterPro:IPR015421
InterPro:IPR015422	UniProt:M4D4K1	HAMAP:MF_00711	PFAM:PF02347	PANTHER:PTHR11773	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	TIGRFAMs:TIGR00461	UniParc:UPI0002546068	SEG:seg

Description

AT4G33010 (E=0.0) AtGLDP1 | AtGLDP1 (Arabidopsis thaliana glycine decarboxylase P-protein 1); catalytic/ glycine dehydrogenase (decarboxylating)/ pyridoxal phosphate binding

Coordinates

chrA01:+:2313842..2318127

Molecular Weight (calculated)

114366.0 Da

IEP (calculated)

7.109

GRAVY (calculated)

-0.203

Length

1045 amino acids

Sequence
(BLAST)

0001: MERARRLAYR GIVRRLVNES KRHRNGEITP HHVPSVVPHA PSRYISSLSP FLSNNHHRSV NLPKHHHHNH NQTRSISVDA VKAGDTFPRR HNSATPDEQA
0101: HMAKYCGYDH IDSLVDDTVP KQIRIDSMKF SKFDGGLTES EMIAHMTELA SKNKVFKSFI GMGYYNTHVP TVIIRNILEN PAWYTQYTPY QAEISQGRLE
0201: SLLNFQTMIT DLTGLPMSNA SLLDEGTAAA EAMAMCNNIQ KGKKKTFVIA SNCHPQTIEI CKTRADGFDL KVVTKDLKEI DYSCGDVCGV LVQYPGTEGE
0301: VLDYGEFVKN AHANGVKVVM ATDLLALTVL KPPGEFGADI VVGSAQRFGV PMGYGGPHAA FLATSSEYKR MMPGRIIGVS VDSTGKPALR MAMQTREQHI
0401: RRDKATSNIC TAQALLANMA AMYAVYHGPA GLKSIAERVH GLAGIFSLGL KKLGVAEVQD LPYFDTVKIK CSDAHAIADA AVKSEMNLRV VDSNTITASF
0501: DETTTLDDVD KLFKVFASGK PVPFTAESLA PEVQNSIPSN LTRESTYLTH PIFNMYHTEH ELLRYIHKLA TKDLSLCHSM IPLGSCTMKL NATTEMMPVS
0601: WPSFTDIHPF APIDQAQGYQ EMFSTLGDLL CTITGFDSLS LQPNAGASGE YTGLMVIREY HRSRGDHHRN VCIIPVSAHG TNPASAAMCG MKIITVGTDA
0701: KGNINMEEVR KAAEDNKDSL AALMVTYPST HGVYEETIDE ICKIIHDNGG QVYMDGANMN AQVGLTSPGF IGADVCHLNL HKTFCIPHGG GGPGMGPIGV
0801: KKHLAPFLPS HPVIPTGGFP QPEKTEPLGP IAAAPWGSAL ILPISYSYIA MMGSRGLTEA SKIAILNANY MAKRLEKHFP VLFRGANGTV AHEFIIDLRG
0901: FKNTAGIEAE DVAKRLMDYG FHAPTMSFPV SGTLMIEPTE SESKAELDRF CDTLISIREE IAQIEKGNAD VQNNVLKGAP HSPAMLMSDT WKKPYSREYA
1001: AFPTPWLRSA KFWPTTGRVD NVYGDRKLVC TLLPEEEQVA AAVSA

Best Arabidopsis Sequence Match ( AT4G33010.1 )
(BLAST)

0001: MERARRLAYR GIVKRLVNDT KRHRNAETPH LVPHAPARYV SSLSPFISTP RSVNHTAAFG RHQQTRSISV DAVKPSDTFP RRHNSATPDE QTHMAKFCGF
0101: DHIDSLIDAT VPKSIRLDSM KFSKFDAGLT ESQMIQHMVD LASKNKVFKS FIGMGYYNTH VPTVILRNIM ENPAWYTQYT PYQAEISQGR LESLLNFQTV
0201: ITDLTGLPMS NASLLDEGTA AAEAMAMCNN ILKGKKKTFV IASNCHPQTI DVCKTRADGF DLKVVTSDLK DIDYSSGDVC GVLVQYPGTE GEVLDYAEFV
0301: KNAHANGVKV VMATDLLALT VLKPPGEFGA DIVVGSAQRF GVPMGYGGPH AAFLATSQEY KRMMPGRIIG ISVDSSGKQA LRMAMQTREQ HIRRDKATSN
0401: ICTAQALLAN MAAMYAVYHG PAGLKSIAQR VHGLAGIFSL GLNKLGVAEV QELPFFDTVK IKCSDAHAIA DAASKSEINL RVVDSTTITA SFDETTTLDD
0501: VDKLFKVFAS GKPVPFTAES LAPEVQNSIP SSLTRESPYL THPIFNMYHT EHELLRYIHK LQSKDLSLCH SMIPLGSCTM KLNATTEMMP VTWPSFTDIH
0601: PFAPVEQAQG YQEMFENLGD LLCTITGFDS FSLQPNAGAA GEYAGLMVIR AYHMSRGDHH RNVCIIPVSA HGTNPASAAM CGMKIITVGT DAKGNINIEE
0701: VRKAAEANKD NLAALMVTYP STHGVYEEGI DEICNIIHEN GGQVYMDGAN MNAQVGLTSP GFIGADVCHL NLHKTFCIPH GGGGPGMGPI GVKNHLAPFL
0801: PSHPVIPTGG IPQPEKTAPL GAISAAPWGS ALILPISYTY IAMMGSGGLT DASKIAILNA NYMAKRLEKH YPVLFRGVNG TVAHEFIIDL RGFKNTAGIE
0901: PEDVAKRLMD YGFHGPTMSW PVPGTLMIEP TESESKAELD RFCDALISIR EEIAQIEKGN ADVQNNVLKG APHPPSLLMA DTWKKPYSRE YAAFPAPWLR
1001: SSKFWPTTGR VDNVYGDRKL VCTLLPEEEQ VAAAVSA

Arabidopsis Description

GLDP1Glycine cleavage system P protein [Source:UniProtKB/TrEMBL;Acc:A0A178UTF1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.