Factsheet for GSMUA_Achr1P14430_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
vacuole 1
mitochondrion 7
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0711400-01	Rice	mitochondrion	28.76	87.27
GSMUA_Achr3P26310_001	Banana	mitochondrion	88.13	87.23
Os06t0611900-01	Rice	mitochondrion	45.04	86.78
PGSC0003DMT400076966	Potato	mitochondrion	80.55	76.04
Solyc08g065220.2.1	Tomato	plastid	80.45	75.87
KRH52197	Soybean	mitochondrion	79.43	75.86
KRH61504	Soybean	mitochondrion	80.04	75.85
KRH15534	Soybean	mitochondrion	81.27	74.98
VIT_11s0016g02280.t01	Wine grape	mitochondrion	76.25	74.95
KRH05459	Soybean	mitochondrion	80.96	74.91
TraesCS3A01G250200.1	Wheat	mitochondrion	78.61	74.49
AT4G33010.1	Thale cress	mitochondrion	78.92	74.35
TraesCS3B01G279700.1	Wheat	plastid	78.3	74.2
TraesCS3D01G250600.1	Wheat	mitochondrion	78.2	74.1
EES15687	Sorghum	mitochondrion	79.02	74.09
AT2G26080.1	Thale cress	mitochondrion	79.12	74.04
Zm00001d023437_P001	Maize	mitochondrion	78.51	73.61
KRH05426	Soybean	peroxisome	27.02	72.93
CDX75316	Canola	mitochondrion	77.38	72.41
Bra011405.1-P	Field mustard	mitochondrion	77.38	72.34
CDX68930	Canola	mitochondrion	77.07	72.06
HORVU3Hr1G067110.2	Barley	vacuole	76.05	72.0
VIT_04s0008g01300.t01	Wine grape	mitochondrion	76.46	70.01
GSMUA_Achr8P05620_001	Banana	cytosol	5.22	47.66
CDY28279	Canola	cytosol	2.05	45.45

Protein Annotations

KEGG:00260+1.4.4.2	MapMan:1.3.4.1	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	ncoils:Coil	InterPro:GDC_P
GO:GO:0003674	GO:GO:0003824	GO:GO:0004375	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006544	GO:GO:0006546	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr1G14430_001	EnsemblPlants:GSMUA_Achr1P14430_001
EnsemblPlants:GSMUA_Achr1T14430_001	InterPro:GcvP	InterPro:IPR015421	InterPro:IPR015422	UniProt:M0RZV1	PFAM:PF02347
PANTHER:PTHR11773	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	TIGRFAMs:TIGR00461
UniParc:UPI000294CA3F	SEG:seg	:	:	:	:

Description

Glycine dehydrogenase [decarboxylating], mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr1G14430_001]

Coordinates

chr1:+:10967961..10974851

Molecular Weight (calculated)

106075.0 Da

IEP (calculated)

7.252

GRAVY (calculated)

-0.068

Length

977 amino acids

Sequence
(BLAST)

001: MERARKLASQ AILRRLISQT RPSPPMPAAT RRVSSLFPAT NSLFRPSVLA ESMLRNGQTR SISVDALRPS DTFPRRHNSA TPEEQFTMAA SCGFSSLDAL
101: IDATVPKTIR ISDIRLPKFD AGLTESEMIA HMSRLAAKNK VFKSFIGMGY YNTLVPGVIL RNIMENPAWY TQYTPYQAEI AQGRLESLLN FQTMISDLTA
201: LPMSNASLLD EGTAAAEAMT MCNNIQKGKK KTFLDFDYKS NDVCGVLVVM ATDLLALTVL KPPGELGADI VVGSAQRFGV PMGYGGPHAA FLATSQEYKR
301: MMPGRIIGVS VDSTGKPGLR MAMQTREQHI RRDKATSNIC TAQALLANMA AMYAVYHGPE GLKAIAERVH GLSCAFAHGL KKLGTVTLQD LPFFDTVKVK
401: CSNAKAIADE ACKNGMNLRV VDSDTITVSF DETTTLEDVD KLFEVFACGK AVNFTAESLA PEVQMVIPKG LVRYSSYLTH PIFNSYHTEH ELLRYIHKLQ
501: SRDLSLCHSM IPLGSCTMKL NATVEMMPVT WPSFADLHPF VPADQAQGYQ EMFKDLGELL CTITGFDSFS LQPNAGAAGE YAGLMVIRAY HLSRGDSHRN
601: VCIIPVSAHG TNPASAAMCG MKIVAVGTDS KGNINIEELR KAAQAHKDNL SALMVTYPST HGVYEEGIDE ICKIIHDNGG QVYMDGANMN AQVGLTSPGF
701: IGADVCHLNL HKTFCIPHGG GGPGMGPIGV KKHLAPFLPS HPVVATGGIP PPENAQPLGT ISAAPWGSAL ILTISYTYIA MMGSKGLTNA SKTAILNANY
801: MAKRLENYYP ILFRGVNGTV AHEFIVDLRG FKATAGIEPE DVAKRLMDYG FHGPTMSWPV PGTLMIEPTE SESKAELDRF CDALISIREE ITQIESGKAD
901: INNNVLKGAP HPLSMLMGDS WNKPYSRECA AFPVSWLRDA KFWPTAGRID NVYGDRNLIC TLPPVSQMAE EAAAATA

Best Arabidopsis Sequence Match ( AT4G33010.1 )
(BLAST)

0001: MERARRLAYR GIVKRLVNDT KRHRNAETPH LVPHAPARYV SSLSPFISTP RSVNHTAAFG RHQQTRSISV DAVKPSDTFP RRHNSATPDE QTHMAKFCGF
0101: DHIDSLIDAT VPKSIRLDSM KFSKFDAGLT ESQMIQHMVD LASKNKVFKS FIGMGYYNTH VPTVILRNIM ENPAWYTQYT PYQAEISQGR LESLLNFQTV
0201: ITDLTGLPMS NASLLDEGTA AAEAMAMCNN ILKGKKKTFV IASNCHPQTI DVCKTRADGF DLKVVTSDLK DIDYSSGDVC GVLVQYPGTE GEVLDYAEFV
0301: KNAHANGVKV VMATDLLALT VLKPPGEFGA DIVVGSAQRF GVPMGYGGPH AAFLATSQEY KRMMPGRIIG ISVDSSGKQA LRMAMQTREQ HIRRDKATSN
0401: ICTAQALLAN MAAMYAVYHG PAGLKSIAQR VHGLAGIFSL GLNKLGVAEV QELPFFDTVK IKCSDAHAIA DAASKSEINL RVVDSTTITA SFDETTTLDD
0501: VDKLFKVFAS GKPVPFTAES LAPEVQNSIP SSLTRESPYL THPIFNMYHT EHELLRYIHK LQSKDLSLCH SMIPLGSCTM KLNATTEMMP VTWPSFTDIH
0601: PFAPVEQAQG YQEMFENLGD LLCTITGFDS FSLQPNAGAA GEYAGLMVIR AYHMSRGDHH RNVCIIPVSA HGTNPASAAM CGMKIITVGT DAKGNINIEE
0701: VRKAAEANKD NLAALMVTYP STHGVYEEGI DEICNIIHEN GGQVYMDGAN MNAQVGLTSP GFIGADVCHL NLHKTFCIPH GGGGPGMGPI GVKNHLAPFL
0801: PSHPVIPTGG IPQPEKTAPL GAISAAPWGS ALILPISYTY IAMMGSGGLT DASKIAILNA NYMAKRLEKH YPVLFRGVNG TVAHEFIIDL RGFKNTAGIE
0901: PEDVAKRLMD YGFHGPTMSW PVPGTLMIEP TESESKAELD RFCDALISIR EEIAQIEKGN ADVQNNVLKG APHPPSLLMA DTWKKPYSRE YAAFPAPWLR
1001: SSKFWPTTGR VDNVYGDRKL VCTLLPEEEQ VAAAVSA

Arabidopsis Description

GLDP1Glycine cleavage system P protein [Source:UniProtKB/TrEMBL;Acc:A0A178UTF1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.