Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0711400-01 | Rice | mitochondrion | 50.0 | 6.83 |
| KRH05426 | Soybean | peroxisome | 54.55 | 6.63 |
| GSMUA_Achr8P05620_001 | Banana | cytosol | 11.36 | 4.67 |
| Os06t0611900-01 | Rice | mitochondrion | 50.0 | 4.34 |
| HORVU3Hr1G051040.1 | Barley | mitochondrion, peroxisome | 6.82 | 3.45 |
| CDX75316 | Canola | mitochondrion | 72.73 | 3.07 |
| CDX68930 | Canola | mitochondrion | 72.73 | 3.06 |
| GSMUA_Achr3P26310_001 | Banana | mitochondrion | 52.27 | 2.33 |
| VIT_11s0016g02280.t01 | Wine grape | mitochondrion | 52.27 | 2.31 |
| KRH61504 | Soybean | mitochondrion | 52.27 | 2.23 |
| PGSC0003DMT400076966 | Potato | mitochondrion | 52.27 | 2.22 |
| Solyc08g065220.2.1 | Tomato | plastid | 52.27 | 2.22 |
| KRH05459 | Soybean | mitochondrion | 52.27 | 2.18 |
| KRH15534 | Soybean | mitochondrion | 52.27 | 2.17 |
| KRH52197 | Soybean | mitochondrion | 50.0 | 2.15 |
| TraesCS3A01G250200.1 | Wheat | mitochondrion | 50.0 | 2.13 |
| TraesCS3B01G279700.1 | Wheat | plastid | 50.0 | 2.13 |
| TraesCS3D01G250600.1 | Wheat | mitochondrion | 50.0 | 2.13 |
| EES15687 | Sorghum | mitochondrion | 50.0 | 2.11 |
| GSMUA_Achr1P14430_001 | Banana | mitochondrion | 45.45 | 2.05 |
| Zm00001d023437_P001 | Maize | mitochondrion | 47.73 | 2.02 |
| VIT_04s0008g01300.t01 | Wine grape | mitochondrion | 11.36 | 0.47 |
Protein Annotations
| EnsemblPlants:CDY28279 | EnsemblPlantsGene:GSBRNA2T00040019001 | ProteinID:CDY28279 | ProteinID:CDY28279.1 | UniParc:UPI0004EEA9B9 | UniProt:A0A078GST9 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC03g66800DBnaC03g66800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GST9]
Coordinates
chrLK032217:-:62630..62847
Molecular Weight (calculated)
4843.0 Da
IEP (calculated)
6.317
GRAVY (calculated)
0.091
Length
44 amino acids
Sequence
(BLAST)
(BLAST)
1: MALLRQCEKL MKCGTCRVDN VYGDRKLVCT LLPDEEQVAA AVSA
0001: MERARRLAYR GIVKRLVNDT KRHRNAETPH LVPHAPARYV SSLSPFISTP RSVNHTAAFG RHQQTRSISV DAVKPSDTFP RRHNSATPDE QTHMAKFCGF
0101: DHIDSLIDAT VPKSIRLDSM KFSKFDAGLT ESQMIQHMVD LASKNKVFKS FIGMGYYNTH VPTVILRNIM ENPAWYTQYT PYQAEISQGR LESLLNFQTV
0201: ITDLTGLPMS NASLLDEGTA AAEAMAMCNN ILKGKKKTFV IASNCHPQTI DVCKTRADGF DLKVVTSDLK DIDYSSGDVC GVLVQYPGTE GEVLDYAEFV
0301: KNAHANGVKV VMATDLLALT VLKPPGEFGA DIVVGSAQRF GVPMGYGGPH AAFLATSQEY KRMMPGRIIG ISVDSSGKQA LRMAMQTREQ HIRRDKATSN
0401: ICTAQALLAN MAAMYAVYHG PAGLKSIAQR VHGLAGIFSL GLNKLGVAEV QELPFFDTVK IKCSDAHAIA DAASKSEINL RVVDSTTITA SFDETTTLDD
0501: VDKLFKVFAS GKPVPFTAES LAPEVQNSIP SSLTRESPYL THPIFNMYHT EHELLRYIHK LQSKDLSLCH SMIPLGSCTM KLNATTEMMP VTWPSFTDIH
0601: PFAPVEQAQG YQEMFENLGD LLCTITGFDS FSLQPNAGAA GEYAGLMVIR AYHMSRGDHH RNVCIIPVSA HGTNPASAAM CGMKIITVGT DAKGNINIEE
0701: VRKAAEANKD NLAALMVTYP STHGVYEEGI DEICNIIHEN GGQVYMDGAN MNAQVGLTSP GFIGADVCHL NLHKTFCIPH GGGGPGMGPI GVKNHLAPFL
0801: PSHPVIPTGG IPQPEKTAPL GAISAAPWGS ALILPISYTY IAMMGSGGLT DASKIAILNA NYMAKRLEKH YPVLFRGVNG TVAHEFIIDL RGFKNTAGIE
0901: PEDVAKRLMD YGFHGPTMSW PVPGTLMIEP TESESKAELD RFCDALISIR EEIAQIEKGN ADVQNNVLKG APHPPSLLMA DTWKKPYSRE YAAFPAPWLR
1001: SSKFWPTTGR VDNVYGDRKL VCTLLPEEEQ VAAAVSA
0101: DHIDSLIDAT VPKSIRLDSM KFSKFDAGLT ESQMIQHMVD LASKNKVFKS FIGMGYYNTH VPTVILRNIM ENPAWYTQYT PYQAEISQGR LESLLNFQTV
0201: ITDLTGLPMS NASLLDEGTA AAEAMAMCNN ILKGKKKTFV IASNCHPQTI DVCKTRADGF DLKVVTSDLK DIDYSSGDVC GVLVQYPGTE GEVLDYAEFV
0301: KNAHANGVKV VMATDLLALT VLKPPGEFGA DIVVGSAQRF GVPMGYGGPH AAFLATSQEY KRMMPGRIIG ISVDSSGKQA LRMAMQTREQ HIRRDKATSN
0401: ICTAQALLAN MAAMYAVYHG PAGLKSIAQR VHGLAGIFSL GLNKLGVAEV QELPFFDTVK IKCSDAHAIA DAASKSEINL RVVDSTTITA SFDETTTLDD
0501: VDKLFKVFAS GKPVPFTAES LAPEVQNSIP SSLTRESPYL THPIFNMYHT EHELLRYIHK LQSKDLSLCH SMIPLGSCTM KLNATTEMMP VTWPSFTDIH
0601: PFAPVEQAQG YQEMFENLGD LLCTITGFDS FSLQPNAGAA GEYAGLMVIR AYHMSRGDHH RNVCIIPVSA HGTNPASAAM CGMKIITVGT DAKGNINIEE
0701: VRKAAEANKD NLAALMVTYP STHGVYEEGI DEICNIIHEN GGQVYMDGAN MNAQVGLTSP GFIGADVCHL NLHKTFCIPH GGGGPGMGPI GVKNHLAPFL
0801: PSHPVIPTGG IPQPEKTAPL GAISAAPWGS ALILPISYTY IAMMGSGGLT DASKIAILNA NYMAKRLEKH YPVLFRGVNG TVAHEFIIDL RGFKNTAGIE
0901: PEDVAKRLMD YGFHGPTMSW PVPGTLMIEP TESESKAELD RFCDALISIR EEIAQIEKGN ADVQNNVLKG APHPPSLLMA DTWKKPYSRE YAAFPAPWLR
1001: SSKFWPTTGR VDNVYGDRKL VCTLLPEEEQ VAAAVSA
Arabidopsis Description
GLDP1Glycine cleavage system P protein [Source:UniProtKB/TrEMBL;Acc:A0A178UTF1]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.