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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • mitochondrion 7
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX75316 Canola mitochondrion 98.18 98.28
AT4G33010.1 Thale cress mitochondrion 89.57 90.26
Os01t0711400-01 Rice mitochondrion 26.41 85.71
Os06t0611900-01 Rice mitochondrion 40.77 84.02
GSMUA_Achr3P26310_001 Banana mitochondrion 75.69 80.14
TraesCS3B01G279700.1 Wheat plastid 77.32 78.37
TraesCS3A01G250200.1 Wheat mitochondrion 77.13 78.18
TraesCS3D01G250600.1 Wheat mitochondrion 77.03 78.08
EES15687 Sorghum mitochondrion 77.7 77.93
Zm00001d023437_P001 Maize mitochondrion 77.03 77.26
GSMUA_Achr1P14430_001 Banana mitochondrion 72.06 77.07
CDY28279 Canola cytosol 3.06 72.73
GSMUA_Achr8P05620_001 Banana cytosol 4.69 45.79
Protein Annotations
KEGG:00260+1.4.4.2MapMan:1.3.4.1Gene3D:3.40.640.10Gene3D:3.90.1150.10GO:A0A078BVU6EnsemblPlants:CDX68930
ProteinID:CDX68930ProteinID:CDX68930.1InterPro:GDC_PGO:GO:0003674GO:GO:0003824GO:GO:0004375
GO:GO:0006544GO:GO:0006546GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987
GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00130674001InterPro:GcvPInterPro:IPR015421InterPro:IPR015422HAMAP:MF_00711
PFAM:PF02347PANTHER:PTHR11773InterPro:PyrdxlP-dep_TrfaseInterPro:PyrdxlP-dep_Trfase_dom1InterPro:PyrdxlP-dep_Trfase_majorSUPFAM:SSF53383
TIGRFAMs:TIGR00461UniParc:UPI0004EDD27ASEG:seg:::
Description
BnaC01g05230D
Coordinates
chrLK031789:-:2083021..2087529
Molecular Weight (calculated)
114291.0 Da
IEP (calculated)
7.066
GRAVY (calculated)
-0.202
Length
1045 amino acids
Sequence
(BLAST)
0001: MERARRLAYR GIVRRLVNES KRHRNGEITP HHVPSVVPHA PARYISSLSP FLSNNHHRSV NLPKHHHHHH NQTRSISVDA VKAGDTFPRR HNSATPDEQA
0101: HMAKYCGYDH IDSLVDDTVP KQIRIDSMKF SKFDGGLTES EMMAHMTELA SKNKVFKSFI GMGYYNTHVP TVIIRNILEN PAWYTQYTPY QAEISQGRLE
0201: SLLNFQTMIT DLTGLPMSNA SLLDEGTAAA EAMAMCNNIQ KGKKKTFVIA SNCHPQTIEI CKTRADGFEL KVVTKDLKEI DYSCGDVCGV LVQYPGTEGE
0301: VLDYGEFVKN AHANGVKVVM ATDLLALTVL KPPGEFGADI VVGSAQRFGV PMGYGGPHAA FLATSSEYKR MMPGRIIGVS VDSTGKPALR MAMQTREQHI
0401: RRDKATSNIC TAQALLANMA AMYAVYHGPA GLKSIAERVH GLAGIFSLGL KKLGVAEVQD LPYFDTVKIK CSDAHAIADA AVKSEMNLRV VDSNTITASF
0501: DETTTLDDVD KLFKVFASGK PVPFTAESLA PEVQNSIPSN LTRESTYLTH PIFNMYHTEH ELLRYIHKLA NKDLSLCHSM IPLGSCTMKL NATTEMMPVS
0601: WPSFTDIHPF APVDQAQGYQ EMFSTLGDLL CTITGFDSLS LQPNAGASGE YTGLMVIREY HRSRGDHHRN VCIIPVSAHG TNPASAAMCG MKIITVGTDA
0701: KGNINMDEVR KAAEDNKDSL AALMVTYPST HGVYEETIDE ICKIIHDNGG QVYMDGANMN AQVGLTSPGF IGADVCHLNL HKTFCIPHGG GGPGMGPIGV
0801: KKHLAPFLPS HPVIPTGGFP QPEKTEPLGP IAAAPWGSAL ILPISYSYIA MMGSGGLTEA SKIAILNANY MAKRLEKHFP VLFRGANGTV AHEFIIDLRG
0901: FKNTAGIEAE DVAKRLMDYG FHAPTMSFPV SGTLMIEPTE SESKAELDRF CDTLISIREE IAQIEKGNAD VQNNVLKGAP HSPAMLMSDT WKKPYSREYA
1001: AFPTPWLRSA KFWPTTGRVD NVYGDRKLVC TLLPEEEQVA AAVSA
Best Arabidopsis Sequence Match ( AT4G33010.1 )
(BLAST)
0001: MERARRLAYR GIVKRLVNDT KRHRNAETPH LVPHAPARYV SSLSPFISTP RSVNHTAAFG RHQQTRSISV DAVKPSDTFP RRHNSATPDE QTHMAKFCGF
0101: DHIDSLIDAT VPKSIRLDSM KFSKFDAGLT ESQMIQHMVD LASKNKVFKS FIGMGYYNTH VPTVILRNIM ENPAWYTQYT PYQAEISQGR LESLLNFQTV
0201: ITDLTGLPMS NASLLDEGTA AAEAMAMCNN ILKGKKKTFV IASNCHPQTI DVCKTRADGF DLKVVTSDLK DIDYSSGDVC GVLVQYPGTE GEVLDYAEFV
0301: KNAHANGVKV VMATDLLALT VLKPPGEFGA DIVVGSAQRF GVPMGYGGPH AAFLATSQEY KRMMPGRIIG ISVDSSGKQA LRMAMQTREQ HIRRDKATSN
0401: ICTAQALLAN MAAMYAVYHG PAGLKSIAQR VHGLAGIFSL GLNKLGVAEV QELPFFDTVK IKCSDAHAIA DAASKSEINL RVVDSTTITA SFDETTTLDD
0501: VDKLFKVFAS GKPVPFTAES LAPEVQNSIP SSLTRESPYL THPIFNMYHT EHELLRYIHK LQSKDLSLCH SMIPLGSCTM KLNATTEMMP VTWPSFTDIH
0601: PFAPVEQAQG YQEMFENLGD LLCTITGFDS FSLQPNAGAA GEYAGLMVIR AYHMSRGDHH RNVCIIPVSA HGTNPASAAM CGMKIITVGT DAKGNINIEE
0701: VRKAAEANKD NLAALMVTYP STHGVYEEGI DEICNIIHEN GGQVYMDGAN MNAQVGLTSP GFIGADVCHL NLHKTFCIPH GGGGPGMGPI GVKNHLAPFL
0801: PSHPVIPTGG IPQPEKTAPL GAISAAPWGS ALILPISYTY IAMMGSGGLT DASKIAILNA NYMAKRLEKH YPVLFRGVNG TVAHEFIIDL RGFKNTAGIE
0901: PEDVAKRLMD YGFHGPTMSW PVPGTLMIEP TESESKAELD RFCDALISIR EEIAQIEKGN ADVQNNVLKG APHPPSLLMA DTWKKPYSRE YAAFPAPWLR
1001: SSKFWPTTGR VDNVYGDRKL VCTLLPEEEQ VAAAVSA
Arabidopsis Description
GLDP1Glycine cleavage system P protein [Source:UniProtKB/TrEMBL;Acc:A0A178UTF1]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.