CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001832.1-P	Field mustard	peroxisome	85.61	99.19
CDY32433	Canola	plastid	93.58	93.58
CDY64791	Canola	plastid	85.75	85.75
CDX90583	Canola	plastid	80.31	84.06
GSMUA_Achr10P...	Banana	cytosol	74.44	83.94
CDY09752	Canola	plastid	83.8	83.57
AT3G21500.3	Thale cress	plastid	78.77	83.31
Solyc01g067890.2.1	Tomato	plastid	80.31	79.97
CDY52177	Canola	plastid	81.84	79.95
PGSC0003DMT400058821	Potato	plastid	80.03	79.69
VIT_05s0020g02130.t01	Wine grape	plastid	79.61	79.61
KRH02173	Soybean	plastid	78.63	79.07
KRH20991	Soybean	plastid	79.61	79.06
Os05t0408900-03	Rice	plastid	78.63	78.19
TraesCS1B01G266500.1	Wheat	plastid	77.51	77.95
TraesCS1D01G255100.1	Wheat	plastid	77.51	77.95
TraesCS1A01G255800.1	Wheat	plastid	77.23	77.67
KRH11287	Soybean	peroxisome, plastid	46.65	77.31
KRH50940	Soybean	plastid	78.35	76.53
GSMUA_Achr3P24940_001	Banana	plastid	79.61	76.2
EES19518	Sorghum	mitochondrion, plastid	76.82	76.18
HORVU1Hr1G060610.9	Barley	mitochondrion, plastid	76.96	75.9
Zm00001d038170_P001	Maize	plastid	78.49	75.13
KRH16140	Soybean	mitochondrion, plastid	11.03	60.31
CDX69763	Canola	plastid	51.54	53.02

Protein Annotations

KEGG:00730+2.2.1.7	KEGG:00900+2.2.1.7	Gene3D:3.40.50.920	Gene3D:3.40.50.970	MapMan:9.1.2.2	GO:A0A078IIG4
UniProt:A0A078IIG4	EnsemblPlants:CDY48893	ProteinID:CDY48893	ProteinID:CDY48893.1	InterPro:Dxylulose-5-P_synthase	GO:GO:0003674
GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0008661	GO:GO:0009058
GO:GO:0009987	GO:GO:0016114	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00091961001	InterPro:IPR009014	HAMAP:MF_00315
PFAM:PF02779	PFAM:PF02780	PFAM:PF13292	ScanProsite:PS00801	ScanProsite:PS00802	PANTHER:PTHR43322
PANTHER:PTHR43322:SF4	MetaCyc:PWY-6891	MetaCyc:PWY-6892	MetaCyc:PWY-7560	SMART:SM00861	SUPFAM:SSF52518
SUPFAM:SSF52922	InterPro:THDP-binding	TIGRFAMs:TIGR00204	InterPro:Transketo_C/PFOR_II	InterPro:Transketolase-like_Pyr-bd	InterPro:Transketolase_BS
InterPro:Transketolase_C	InterPro:Transketolase_N	UniPathway:UPA00064	UniParc:UPI0004EDD6D3	SEG:seg	:

Description

BnaA03g36320DBnaA03g36320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IIG4]

Coordinates

chrLK032799:-:82043..85375

Molecular Weight (calculated)

77494.1 Da

IEP (calculated)

8.388

GRAVY (calculated)

-0.155

Length

716 amino acids

Sequence
(BLAST)

001: MALSVFRFPS YLSRETSTDH CKTTSLSSFK SLATYLPSIC HRSTVSRSKI STTVNGSLVK RGDYYSTRPP TPLLDTINHP IHMKNLSIKE LKALSDELRS
101: DVIFNVSKTG GHLGSNLGVV ELTVALHYIF NTPQDKILWD VGHQSYPHKI LTGRRGKMKT LRQTNGLSGF TQRGESEHDS FGTGHSSTTI SAGLGMAVGR
201: DLKGRDNNVV AVIGDGAMTA GQAYEAMNNA GYLESDMIVI LNDNKQVSLP TANLDGPTPP VGSLSRALSK LQSKRPLREL REAAKGMTKK IGGSMHRLAS
301: KVDENARGMI SGAGSTLFEE LGFYYIGPVD GHNLDDLVSI LKEVKSTRTS GPVLIHVVTE KGHGYPYAER GDDKYHGVVK FDPATGKQFK NIAETKSYTT
401: YFAEALIAEA EEDKDVVAIH AAMGGGTGLN LFQRRFSTRC FDVGIAEQHA VTFAAGLACE GLKPFCAIYS SFMQRAYDQV VHDVDLQKLP VRFAMDRAGL
501: VGADGPTHCG AFDVTFMACL PNMIVMAPSD EAELFNMVAT AAAIDDRPSC FRYPRGNGVG VSLPPGNKGV PLEVGKGRIL REGERVALLG YGSAVQNCLE
601: ASSVLDKRGL KITVADARFC KPLDIALIRK LAKSHEVLIT VEEGSIGGFG SHVVQFLALD GLLDGKLKWR PMVLPDRYIE HGSPLDQLAE AGLTASHIAA
701: TVLNLIGTPR ETLYWK

Best Arabidopsis Sequence Match ( AT4G15560.1 )
(BLAST)

001: MASSAFAFPS YIITKGGLST DSCKSTSLSS SRSLVTDLPS PCLKPNNNSH SNRRAKVCAS LAEKGEYYSN RPPTPLLDTI NYPIHMKNLS VKELKQLSDE
101: LRSDVIFNVS KTGGHLGSSL GVVELTVALH YIFNTPQDKI LWDVGHQSYP HKILTGRRGK MPTMRQTNGL SGFTKRGESE HDCFGTGHSS TTISAGLGMA
201: VGRDLKGKNN NVVAVIGDGA MTAGQAYEAM NNAGYLDSDM IVILNDNKQV SLPTATLDGP SPPVGALSSA LSRLQSNPAL RELREVAKGM TKQIGGPMHQ
301: LAAKVDEYAR GMISGTGSSL FEELGLYYIG PVDGHNIDDL VAILKEVKST RTTGPVLIHV VTEKGRGYPY AERADDKYHG VVKFDPATGR QFKTTNKTQS
401: YTTYFAEALV AEAEVDKDVV AIHAAMGGGT GLNLFQRRFP TRCFDVGIAE QHAVTFAAGL ACEGLKPFCA IYSSFMQRAY DQVVHDVDLQ KLPVRFAMDR
501: AGLVGADGPT HCGAFDVTFM ACLPNMIVMA PSDEADLFNM VATAVAIDDR PSCFRYPRGN GIGVALPPGN KGVPIEIGKG RILKEGERVA LLGYGSAVQS
601: CLGAAVMLEE RGLNVTVADA RFCKPLDRAL IRSLAKSHEV LITVEEGSIG GFGSHVVQFL ALDGLLDGKL KWRPMVLPDR YIDHGAPADQ LAEAGLMPSH
701: IAATALNLIG APREALF

Arabidopsis Description

DXSDXS1 [Source:UniProtKB/TrEMBL;Acc:A0A178V5I0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.