Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69763 | Canola | plastid | 94.83 | 94.83 |
| AT5G11380.1 | Thale cress | plastid | 85.2 | 84.71 |
| PGSC0003DMT400074817 | Potato | cytosol, peroxisome, plastid | 20.4 | 74.74 |
| Os06t0142900-02 | Rice | peroxisome, plastid | 22.41 | 69.96 |
| Solyc08g066950.2.1 | Tomato | plastid | 64.8 | 63.61 |
| KRH52494 | Soybean | plastid | 64.94 | 63.13 |
| VIT_04s0008g04970.t01 | Wine grape | plastid | 64.94 | 62.87 |
| KRH61817 | Soybean | plastid | 65.09 | 62.83 |
| EER89177 | Sorghum | peroxisome | 59.77 | 57.62 |
| Bra001832.1-P | Field mustard | peroxisome | 50.72 | 57.12 |
| Zm00001d045383_P006 | Maize | peroxisome | 60.06 | 55.66 |
| Bra033495.1-P | Field mustard | plastid | 52.3 | 51.41 |
| Bra012779.1-P | Field mustard | plastid | 50.43 | 51.32 |
| GSMUA_Achr4P17610_001 | Banana | extracellular, nucleus | 0.0 | 0.0 |
Protein Annotations
| KEGG:00730+2.2.1.7 | KEGG:00900+2.2.1.7 | Gene3D:3.40.50.920 | Gene3D:3.40.50.970 | MapMan:9.1.2.2 | EnsemblPlantsGene:Bra008967 |
| EnsemblPlants:Bra008967.1 | EnsemblPlants:Bra008967.1-P | InterPro:Dxylulose-5-P_synthase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008661 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016114 |
| GO:GO:0016740 | InterPro:IPR009014 | UniProt:M4CXM0 | PFAM:PF02779 | PFAM:PF02780 | PFAM:PF13292 |
| PANTHER:PTHR43322 | PANTHER:PTHR43322:SF3 | SMART:SM00861 | SUPFAM:SSF52518 | SUPFAM:SSF52922 | InterPro:THDP-binding |
| InterPro:Transketo_C/PFOR_II | InterPro:Transketolase-like_Pyr-bd | InterPro:Transketolase_C | UniParc:UPI00025442F0 | : | : |
Description
AT5G11380 (E=0.0) DXPS3 | DXPS3 (1-deoxy-D-xylulose 5-phosphate synthase 3); 1-deoxy-D-xylulose-5-phosphate synthase
Coordinates
chrA10:-:14660259..14663145
Molecular Weight (calculated)
76127.7 Da
IEP (calculated)
7.197
GRAVY (calculated)
-0.021
Length
696 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSTSIGYQS GISARFDDRN LNLRSDATFS SLPCKVDFSR KSFFSPTTST HNKVCSNRAR VCSLPNTDEK LETPILDSIE TPSQLKNLTV KELKVLADEI
101: RTELLSVLWK TRRSVKPSLA AIELTLALHY VFRAPVDKIL WDAVEQTYAH KVLTRRWSSI PSRQNNGVSS VTSRLESEYD SFGTGHGCNS ISAGLGLAVA
201: RDIKGKRDRV VAVIDSVTIT AGQAYEAMSN AGYLDSNMIV ILNDNRHSLH PNMADGSKAS ISALSSFMSK IQSSQIFRKF RELAKAMTKK IGKGMYEWAA
301: KVDEYARGMV GPTGSTLFEE LGLYYIGPVD GHNIEDLVCV LREVASLDSM GPVLVHVITE ERRDAETANI VVKDRRTYSD CFAEALVKEA EKDRDIVVVH
401: AGIEMDPSLV TFQERFPDRF FNVGMAEQHA VTFSAGLSSG GLKPFCIIPS AFLQRAYDQV VHDVDRQRKA VRFVITSAGL VGSDGPVQCG AFDIAFMSCL
501: PNMIAMAPAN EDELVNMVAT AANVTDRPVC FRFPRGAIVN KNYLVPIGLP IEIGRGRVLL EGQDVALLGY GAMVQNCLNA HSLLSKLGLN VTVADARFCK
601: PLDIKLVRDL CQNHKFLITV EEGCVGGFGS HVAQFIALDG QLDGKIKWRP IVLPDGYIEE ASPNEQLALA GLTGHHIAAT ALSLLGRTRE ALLLMS
101: RTELLSVLWK TRRSVKPSLA AIELTLALHY VFRAPVDKIL WDAVEQTYAH KVLTRRWSSI PSRQNNGVSS VTSRLESEYD SFGTGHGCNS ISAGLGLAVA
201: RDIKGKRDRV VAVIDSVTIT AGQAYEAMSN AGYLDSNMIV ILNDNRHSLH PNMADGSKAS ISALSSFMSK IQSSQIFRKF RELAKAMTKK IGKGMYEWAA
301: KVDEYARGMV GPTGSTLFEE LGLYYIGPVD GHNIEDLVCV LREVASLDSM GPVLVHVITE ERRDAETANI VVKDRRTYSD CFAEALVKEA EKDRDIVVVH
401: AGIEMDPSLV TFQERFPDRF FNVGMAEQHA VTFSAGLSSG GLKPFCIIPS AFLQRAYDQV VHDVDRQRKA VRFVITSAGL VGSDGPVQCG AFDIAFMSCL
501: PNMIAMAPAN EDELVNMVAT AANVTDRPVC FRFPRGAIVN KNYLVPIGLP IEIGRGRVLL EGQDVALLGY GAMVQNCLNA HSLLSKLGLN VTVADARFCK
601: PLDIKLVRDL CQNHKFLITV EEGCVGGFGS HVAQFIALDG QLDGKIKWRP IVLPDGYIEE ASPNEQLALA GLTGHHIAAT ALSLLGRTRE ALLLMS
001: MGSASIGYQF GISARFYGNF NLSSDITVSS LPCKLDVSIK SLFSAPSSTH KEYSNRARVC SLPNTDGYCD EKFETPILDS IETPLQLKNL SVKELKLLAD
101: EIRTELHSVL WKKTQKSMNP SFAAIELTLA LHYVFRAPVD NILWDAVEQT YAHKVLTRRW SAIPSRQNSG ISGVTSRLES EYDSFGTGHG CNSISAGLGL
201: AVARDMKGKR DRVVAVIDNV TITAGQAYEA MSNAGYLDSN MIVILNDSRH SLHPNMEEGS KASISALSSI MSKIQSSKVF RKFRELAKAM TKRIGKGMYE
301: WAAKVDEYAR GMVGPTGSTL FEELGLYYIG PVDGHNIEDL VCVLREVSSL DSMGPVLVHV ITEGNRDAET VKNIMVKDRR TYSDCFVEAL VMEAEKDRDI
401: VVVHAGMEMD PSLLTFQERF PDRFFNVGMA EQHAVTFSAG LSSGGLKPFC IIPSAFLQRA YDQVVHDVDR QRKAVRFVIT SAGLVGSDGP VQCGAFDIAF
501: MSSLPNMIAM APADEDELVN MVATAAYVTD RPVCFRFPRG SIVNMNYLVP TGLPIEIGRG RVLVEGQDVA LLGYGAMVQN CLHAHSLLSK LGLNVTVADA
601: RFCKPLDIKL VRDLCQNHKF LITVEEGCVG GFGSHVAQFI ALDGQLDGNI KWRPIVLPDG YIEEASPREQ LALAGLTGHH IAATALSLLG RTREALLLMS
101: EIRTELHSVL WKKTQKSMNP SFAAIELTLA LHYVFRAPVD NILWDAVEQT YAHKVLTRRW SAIPSRQNSG ISGVTSRLES EYDSFGTGHG CNSISAGLGL
201: AVARDMKGKR DRVVAVIDNV TITAGQAYEA MSNAGYLDSN MIVILNDSRH SLHPNMEEGS KASISALSSI MSKIQSSKVF RKFRELAKAM TKRIGKGMYE
301: WAAKVDEYAR GMVGPTGSTL FEELGLYYIG PVDGHNIEDL VCVLREVSSL DSMGPVLVHV ITEGNRDAET VKNIMVKDRR TYSDCFVEAL VMEAEKDRDI
401: VVVHAGMEMD PSLLTFQERF PDRFFNVGMA EQHAVTFSAG LSSGGLKPFC IIPSAFLQRA YDQVVHDVDR QRKAVRFVIT SAGLVGSDGP VQCGAFDIAF
501: MSSLPNMIAM APADEDELVN MVATAAYVTD RPVCFRFPRG SIVNMNYLVP TGLPIEIGRG RVLVEGQDVA LLGYGAMVQN CLHAHSLLSK LGLNVTVADA
601: RFCKPLDIKL VRDLCQNHKF LITVEEGCVG GFGSHVAQFI ALDGQLDGNI KWRPIVLPDG YIEEASPREQ LALAGLTGHH IAATALSLLG RTREALLLMS
Arabidopsis Description
DXPS31-D-deoxyxylulose 5-phosphate synthase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LFL9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.