Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- cytosol 1
- plastid 6
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400074817 | Potato | cytosol, peroxisome, plastid | 26.8 | 100.0 |
| VIT_04s0008g04970.t01 | Wine grape | plastid | 69.68 | 68.71 |
| AT5G11380.1 | Thale cress | plastid | 65.44 | 66.29 |
| Os06t0142900-02 | Rice | peroxisome, plastid | 20.73 | 65.92 |
| KRH52494 | Soybean | plastid | 65.73 | 65.08 |
| Bra008967.1-P | Field mustard | plastid | 63.61 | 64.8 |
| CDX69763 | Canola | plastid | 63.33 | 64.51 |
| KRH61817 | Soybean | plastid | 65.3 | 64.22 |
| EER89177 | Sorghum | peroxisome | 60.23 | 59.14 |
| Zm00001d045383_P006 | Maize | peroxisome | 60.37 | 56.99 |
| Solyc01g067890.2.1 | Tomato | plastid | 54.3 | 53.55 |
| Solyc11g010850.1.1 | Tomato | plastid | 51.76 | 51.4 |
| GSMUA_Achr4P17610_001 | Banana | extracellular, nucleus | 0.0 | 0.0 |
Protein Annotations
| KEGG:00730+2.2.1.7 | KEGG:00900+2.2.1.7 | Gene3D:3.40.50.920 | Gene3D:3.40.50.970 | MapMan:9.1.2.2 | InterPro:Dxylulose-5-P_synthase |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008661 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016114 | GO:GO:0016740 | InterPro:IPR009014 | UniProt:K4CLS1 |
| PFAM:PF02779 | PFAM:PF02780 | PFAM:PF13292 | PANTHER:PTHR43322 | PANTHER:PTHR43322:SF3 | SMART:SM00861 |
| SUPFAM:SSF52518 | SUPFAM:SSF52922 | EnsemblPlantsGene:Solyc08g066950.2 | EnsemblPlants:Solyc08g066950.2.1 | InterPro:THDP-binding | TIGRFAMs:TIGR00204 |
| InterPro:Transketo_C/PFOR_II | InterPro:Transketolase-like_Pyr-bd | InterPro:Transketolase_C | UniParc:UPI000276C08D | SEG:seg | : |
Description
No Description!
Coordinates
chr8:+:55823329..55836887
Molecular Weight (calculated)
77177.3 Da
IEP (calculated)
6.232
GRAVY (calculated)
0.041
Length
709 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAVTAQYPF GICPQFHGNS RLLSPETDFS ALNFPYTLGY SKLSLHPKGH VAEIHSLPHA GDFTGENEPT PILDAIESPM NLKNLSTKEL KQLANEIRSE
101: LAFIIAKSQK PSSSSLTVVE LTVAIHHVFN APVDKILWDV AEQTYAHKLL TGRRQIMQAL EKTNGWPVAA PDFEGGFDPF GVGHGCNSVS AGLGMAIARD
201: LKGKRDRVVA VINNETIMAG QVYEAMRNSG YLDSNMIVIL NDSRHSLHPK VEETSKTPIN AFSSTLSKLQ SSKLFRRFRE LAKALTKKIG KGMYEWAAKV
301: DEYARGMIGP PGSTLFEELG LYYIGPVDGH NIEDLVCVLN EVASLDSMGP VLVHVITKEE LEVGDNQMNA VANKIMEGVS ISDTIPYGNR TYSDCFVEAL
401: ISEAERHKDI VAVHAGMGME PSLHLLKDVF AEKFFDVGMA EQHAVTFAAG LACGGLKPFC IIPSAFLQRA YDQVVHDVDR QKVPVRFIIT SAGLVGSDGP
501: IHCGTFDIAF MSCLPNMIVM APSDEVELSH MVATAALIDD RPVCFRYPRG ALSVMEHSFS GIPIEVGRGR ILTEGKDVAL LGYGSMVQNC LRAQSLLSKL
601: GVEVTVADAR FCKPLDIQLL RQLCKNHSFL VTVEEGSIGG FASHVAQFLS LDGQLDAGIK WRPITLPDNY IEQASPKEQL AVAGLTGNHI AATALSLLGR
701: TREALLLMC
101: LAFIIAKSQK PSSSSLTVVE LTVAIHHVFN APVDKILWDV AEQTYAHKLL TGRRQIMQAL EKTNGWPVAA PDFEGGFDPF GVGHGCNSVS AGLGMAIARD
201: LKGKRDRVVA VINNETIMAG QVYEAMRNSG YLDSNMIVIL NDSRHSLHPK VEETSKTPIN AFSSTLSKLQ SSKLFRRFRE LAKALTKKIG KGMYEWAAKV
301: DEYARGMIGP PGSTLFEELG LYYIGPVDGH NIEDLVCVLN EVASLDSMGP VLVHVITKEE LEVGDNQMNA VANKIMEGVS ISDTIPYGNR TYSDCFVEAL
401: ISEAERHKDI VAVHAGMGME PSLHLLKDVF AEKFFDVGMA EQHAVTFAAG LACGGLKPFC IIPSAFLQRA YDQVVHDVDR QKVPVRFIIT SAGLVGSDGP
501: IHCGTFDIAF MSCLPNMIVM APSDEVELSH MVATAALIDD RPVCFRYPRG ALSVMEHSFS GIPIEVGRGR ILTEGKDVAL LGYGSMVQNC LRAQSLLSKL
601: GVEVTVADAR FCKPLDIQLL RQLCKNHSFL VTVEEGSIGG FASHVAQFLS LDGQLDAGIK WRPITLPDNY IEQASPKEQL AVAGLTGNHI AATALSLLGR
701: TREALLLMC
001: MGSASIGYQF GISARFYGNF NLSSDITVSS LPCKLDVSIK SLFSAPSSTH KEYSNRARVC SLPNTDGYCD EKFETPILDS IETPLQLKNL SVKELKLLAD
101: EIRTELHSVL WKKTQKSMNP SFAAIELTLA LHYVFRAPVD NILWDAVEQT YAHKVLTRRW SAIPSRQNSG ISGVTSRLES EYDSFGTGHG CNSISAGLGL
201: AVARDMKGKR DRVVAVIDNV TITAGQAYEA MSNAGYLDSN MIVILNDSRH SLHPNMEEGS KASISALSSI MSKIQSSKVF RKFRELAKAM TKRIGKGMYE
301: WAAKVDEYAR GMVGPTGSTL FEELGLYYIG PVDGHNIEDL VCVLREVSSL DSMGPVLVHV ITEGNRDAET VKNIMVKDRR TYSDCFVEAL VMEAEKDRDI
401: VVVHAGMEMD PSLLTFQERF PDRFFNVGMA EQHAVTFSAG LSSGGLKPFC IIPSAFLQRA YDQVVHDVDR QRKAVRFVIT SAGLVGSDGP VQCGAFDIAF
501: MSSLPNMIAM APADEDELVN MVATAAYVTD RPVCFRFPRG SIVNMNYLVP TGLPIEIGRG RVLVEGQDVA LLGYGAMVQN CLHAHSLLSK LGLNVTVADA
601: RFCKPLDIKL VRDLCQNHKF LITVEEGCVG GFGSHVAQFI ALDGQLDGNI KWRPIVLPDG YIEEASPREQ LALAGLTGHH IAATALSLLG RTREALLLMS
101: EIRTELHSVL WKKTQKSMNP SFAAIELTLA LHYVFRAPVD NILWDAVEQT YAHKVLTRRW SAIPSRQNSG ISGVTSRLES EYDSFGTGHG CNSISAGLGL
201: AVARDMKGKR DRVVAVIDNV TITAGQAYEA MSNAGYLDSN MIVILNDSRH SLHPNMEEGS KASISALSSI MSKIQSSKVF RKFRELAKAM TKRIGKGMYE
301: WAAKVDEYAR GMVGPTGSTL FEELGLYYIG PVDGHNIEDL VCVLREVSSL DSMGPVLVHV ITEGNRDAET VKNIMVKDRR TYSDCFVEAL VMEAEKDRDI
401: VVVHAGMEMD PSLLTFQERF PDRFFNVGMA EQHAVTFSAG LSSGGLKPFC IIPSAFLQRA YDQVVHDVDR QRKAVRFVIT SAGLVGSDGP VQCGAFDIAF
501: MSSLPNMIAM APADEDELVN MVATAAYVTD RPVCFRFPRG SIVNMNYLVP TGLPIEIGRG RVLVEGQDVA LLGYGAMVQN CLHAHSLLSK LGLNVTVADA
601: RFCKPLDIKL VRDLCQNHKF LITVEEGCVG GFGSHVAQFI ALDGQLDGNI KWRPIVLPDG YIEEASPREQ LALAGLTGHH IAATALSLLG RTREALLLMS
Arabidopsis Description
DXPS31-D-deoxyxylulose 5-phosphate synthase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LFL9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.