Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g053900.2.1 | Tomato | cytosol | 92.96 | 82.5 |
| VIT_12s0028g03560.t01 | Wine grape | cytosol | 50.0 | 46.86 |
| KRH25597 | Soybean | nucleus | 47.18 | 46.69 |
| PGSC0003DMT400076442 | Potato | nucleus | 48.59 | 45.7 |
| AT4G32480.1 | Thale cress | nucleus | 44.37 | 43.9 |
| CDX92863 | Canola | nucleus | 45.42 | 43.73 |
| CDY05782 | Canola | nucleus | 45.42 | 43.43 |
| Bra036492.1-P | Field mustard | nucleus | 45.42 | 43.43 |
| CDY29898 | Canola | nucleus | 45.07 | 43.39 |
| Bra024209.1-P | Field mustard | nucleus | 45.07 | 43.39 |
| CDY31947 | Canola | nucleus | 44.72 | 42.76 |
| CDX81975 | Canola | nucleus | 44.37 | 42.57 |
| Bra031136.1-P | Field mustard | nucleus | 43.66 | 42.18 |
| AT2G20670.1 | Thale cress | nucleus | 43.66 | 42.18 |
| CDY49659 | Canola | nucleus | 44.37 | 42.14 |
| Bra026262.1-P | Field mustard | nucleus | 44.37 | 42.14 |
| CDY18979 | Canola | nucleus | 44.01 | 41.81 |
| CDY13861 | Canola | nucleus | 43.31 | 41.55 |
| PGSC0003DMT400033381 | Potato | cytosol, mitochondrion, nucleus | 44.72 | 41.5 |
| GSMUA_Achr7P24960_001 | Banana | cytosol | 39.08 | 40.51 |
| EES01469 | Sorghum | nucleus | 38.73 | 39.01 |
| HORVU3Hr1G071220.1 | Barley | nucleus | 35.92 | 38.93 |
| Zm00001d043444_P001 | Maize | nucleus | 38.38 | 38.38 |
| GSMUA_Achr3P31780_001 | Banana | cytosol | 38.73 | 38.33 |
| GSMUA_Achr4P02600_001 | Banana | nucleus | 36.62 | 37.41 |
| TraesCS3B01G307800.1 | Wheat | nucleus | 35.92 | 36.56 |
| TraesCS3D01G273300.1 | Wheat | nucleus | 35.56 | 36.46 |
| TraesCS3A01G274100.1 | Wheat | nucleus | 35.21 | 35.84 |
| HORVU1Hr1G076120.1 | Barley | nucleus | 33.45 | 33.81 |
| EES19824 | Sorghum | cytosol | 35.21 | 33.22 |
| Os05t0519300-01 | Rice | cytosol | 35.21 | 32.68 |
| TraesCS1D01G341700.1 | Wheat | cytosol | 32.39 | 31.72 |
| TraesCS1B01G352000.1 | Wheat | nucleus | 31.69 | 31.47 |
| TraesCS1A01G339700.1 | Wheat | cytosol | 31.69 | 30.93 |
| PGSC0003DMT400079089 | Potato | cytosol | 15.14 | 28.29 |
| PGSC0003DMT400045914 | Potato | cytosol, extracellular, nucleus | 24.3 | 24.64 |
| PGSC0003DMT400008686 | Potato | cytosol | 20.42 | 21.17 |
| PGSC0003DMT400053173 | Potato | nucleus | 22.18 | 21.07 |
| PGSC0003DMT400051812 | Potato | nucleus | 19.37 | 18.52 |
| PGSC0003DMT400025041 | Potato | cytosol | 19.37 | 17.63 |
| PGSC0003DMT400041951 | Potato | cytosol | 22.89 | 17.57 |
| PGSC0003DMT400015576 | Potato | cytosol, plastid | 21.83 | 15.66 |
| PGSC0003DMT400049773 | Potato | nucleus | 23.24 | 15.21 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400047228 | EnsemblPlantsGene:PGSC0003DMG400018336 | EntrezGene:102592154 | InterPro:PDDEXK-like | PANTHER:PTHR31579 | PANTHER:PTHR31579:SF2 |
| PFAM:PF04720 | PGSC:PGSC0003DMG400018336 | RefSeq:XP_006357473.1 | TIGRFAMs:TIGR01615 | UniParc:UPI00029542F0 | UniProt:M1BKB9 |
| MapMan:35.2 | : | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400018336]
Coordinates
chr7:+:49272650..49273720
Molecular Weight (calculated)
32716.3 Da
IEP (calculated)
6.518
GRAVY (calculated)
-0.528
Length
284 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAKNSDEPE GLYELTFGFI DEGIEFQSCE NSLESNISYS SREILMDEEE EDGNVNDSEE NKAFWAIQEE LLKTTLCRTT SFESKVRKST KEALKELKFT
101: SFNCSCRKMV SDGCRKCMQR EISDRLTNEG YNCFICKSKW KSTPEILSGE YTYMEVVANA SSKKGEMKVI IELNFRGEFE MARANEGYNC LVEQLPEVYV
201: GKIERLRNLI KILCCASKKC MKEKKMHLAP WRKHKYMQAK YLGSPEIKSE TIFPVNNFRR LPRPSGSMLT FDLLDSLTPA IKVI
101: SFNCSCRKMV SDGCRKCMQR EISDRLTNEG YNCFICKSKW KSTPEILSGE YTYMEVVANA SSKKGEMKVI IELNFRGEFE MARANEGYNC LVEQLPEVYV
201: GKIERLRNLI KILCCASKKC MKEKKMHLAP WRKHKYMQAK YLGSPEIKSE TIFPVNNFRR LPRPSGSMLT FDLLDSLTPA IKVI
001: MDRQSSDDIM KFLDGMASSD DVLFGFLDEG NHSPEDYNFA AGDESEVDND TTDCNSEENR KFWQEHEQLL QATLYRTSSI ETKIRQATKE ALKVVRSKGL
101: VCVCRRPVTD GCRSCLRGEV SSLLREAGYD CVISKSKWRS SHEIPAGEHE YLEVVDKSVS KKGEIRVVIE LCFRAEFEMA RGSEEYKRLI GMLPEVYVGK
201: TERLKSLIKI LCTAAKKCMK DKKMHMGPWR KHKYMQAKWF GTCERKSVSP VSETEENMFP VAKQRVSMLN YGLFGAGIGR PTVVAVV
101: VCVCRRPVTD GCRSCLRGEV SSLLREAGYD CVISKSKWRS SHEIPAGEHE YLEVVDKSVS KKGEIRVVIE LCFRAEFEMA RGSEEYKRLI GMLPEVYVGK
201: TERLKSLIKI LCTAAKKCMK DKKMHMGPWR KHKYMQAKWF GTCERKSVSP VSETEENMFP VAKQRVSMLN YGLFGAGIGR PTVVAVV
Arabidopsis Description
AT4g32480/F8B4_180 [Source:UniProtKB/TrEMBL;Acc:Q9SUU4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.