Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- vacuole 1
- cytosol 3
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| cytosol:
11855722
endoplasmic reticulum: 11855722 nucleus: 11855722 plasma membrane: 11855722 cytosol: 19136647 nucleus: 19136647 plasma membrane: 19136647 |
plasma membrane:
27800704
|
gfp PMID:
11855722
doi
Department of Biochemistry, School of Life Sciences, Fudan University, Shanghai, China.
gfp PMID:
19136647
doi
Institut de Biologie Moléculaire des Plantes (Centre National de la Recherche Scientifique, Unité Propre de Recherche 2357, associated with the Université Louis Pasteur), F-67083 Strasbourg, France.
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400046278 | Potato | cytosol | 35.29 | 85.71 |
| Os07t0687200-02 | Rice | cytosol | 67.38 | 84.56 |
| Solyc10g081170.1.1 | Tomato | extracellular | 67.38 | 84.56 |
| Solyc01g008950.2.1 | Tomato | nucleus | 67.38 | 84.56 |
| KRG94975 | Soybean | nucleus | 67.38 | 84.56 |
| Os01t0267900-01 | Rice | cytosol | 67.38 | 84.56 |
| PGSC0003DMT400058435 | Potato | cytosol | 67.38 | 84.56 |
| Os03t0319300-01 | Rice | cytosol, extracellular, nucleus | 67.38 | 84.56 |
| Bra014671.1-P | Field mustard | cytosol | 67.38 | 84.56 |
| Bra003251.1-P | Field mustard | cytosol | 67.38 | 84.56 |
| Bra000214.1-P | Field mustard | cytosol | 67.38 | 84.56 |
| Os05t0491100-01 | Rice | cytosol, extracellular | 67.38 | 84.56 |
| AT3G56800.1 | Thale cress | cytosol | 67.38 | 84.56 |
| VIT_08s0040g00470.t01 | Wine grape | cytosol | 67.38 | 84.56 |
| CDY55678 | Canola | cytosol | 66.84 | 83.89 |
| Bra002368.1-P | Field mustard | cytosol | 66.84 | 83.89 |
| Solyc11g072240.1.1 | Tomato | cytosol | 66.84 | 83.89 |
| Solyc10g077010.1.1 | Tomato | cytosol | 66.84 | 83.89 |
| CDY65072 | Canola | cytosol | 66.84 | 83.89 |
| CDX96148 | Canola | cytosol | 66.84 | 83.89 |
| PGSC0003DMT400018569 | Potato | cytosol | 66.84 | 83.89 |
| Os01t0279300-01 | Rice | cytosol, plasma membrane, plastid | 66.84 | 83.89 |
| PGSC0003DMT400070437 | Potato | cytosol | 66.84 | 83.89 |
| Solyc12g099990.1.1 | Tomato | nucleus | 66.84 | 83.89 |
| Bra020155.1-P | Field mustard | cytosol | 66.84 | 83.89 |
| AT5G21274.1 | Thale cress | cytosol | 66.84 | 83.89 |
| Bra007269.1-P | Field mustard | cytosol | 66.84 | 83.89 |
| Bra006595.1-P | Field mustard | cytosol | 66.84 | 83.89 |
| Bra004166.1-P | Field mustard | cytosol | 66.84 | 83.89 |
| VIT_06s0009g01910.t01 | Wine grape | cytosol | 68.45 | 83.66 |
| CDX92401 | Canola | cytosol | 59.89 | 83.58 |
| CDY56411 | Canola | cytosol | 66.31 | 83.22 |
| CDY04474 | Canola | cytosol | 66.31 | 83.22 |
| Bra012037.1-P | Field mustard | cytosol | 66.31 | 83.22 |
| Bra019453.1-P | Field mustard | cytosol | 66.31 | 83.22 |
| Bra025438.1-P | Field mustard | cytosol | 50.27 | 83.19 |
| CDY27651 | Canola | cytosol | 66.31 | 82.67 |
| CDX99690 | Canola | cytosol | 65.78 | 82.55 |
| PGSC0003DMT400054299 | Potato | cytosol | 49.73 | 82.3 |
| CDY12321 | Canola | cytosol | 63.1 | 81.38 |
| Bra034981.1-P | Field mustard | cytosol | 63.1 | 81.38 |
| AT1G66410.2 | Thale cress | cytosol | 67.38 | 79.25 |
| AT2G41110.2 | Thale cress | cytosol | 67.38 | 78.26 |
| KRH18664 | Soybean | cytosol | 57.75 | 77.14 |
| AT2G27030.3 | Thale cress | cytosol | 71.66 | 74.03 |
| Bra034317.1-P | Field mustard | cytosol | 70.59 | 73.74 |
| CDY48191 | Canola | cytosol | 70.59 | 73.74 |
| CDX77060 | Canola | cytosol | 70.59 | 73.33 |
| PGSC0003DMT400014123 | Potato | mitochondrion | 47.06 | 72.13 |
| AT5G37780.3 | Thale cress | cytosol | 67.38 | 72.0 |
| CDX75970 | Canola | cytosol | 41.71 | 68.42 |
| KRG89812 | Soybean | cytosol, mitochondrion | 56.15 | 63.64 |
| PGSC0003DMT400097662 | Potato | cytosol, mitochondrion | 58.82 | 63.58 |
| HORVU5Hr1G044710.4 | Barley | cytosol | 60.96 | 63.33 |
| Os03t0743500-02 | Rice | nucleus | 51.87 | 62.99 |
| TraesCS5D01G153400.1 | Wheat | cytosol | 60.43 | 62.78 |
| TraesCS5B01G137100.1 | Wheat | cytosol | 60.43 | 62.78 |
| TraesCS5A01G139700.1 | Wheat | cytosol | 60.43 | 62.78 |
| CDY30947 | Canola | cytosol | 68.98 | 61.72 |
| AT3G43810.2 | Thale cress | cytosol | 70.05 | 61.22 |
| EES09201 | Sorghum | cytosol | 58.82 | 61.11 |
| Zm00001d052415_P001 | Maize | cytosol | 51.34 | 60.76 |
| Zm00001d005003_P002 | Maize | cytosol | 57.75 | 60.0 |
| Os12t0603800-00 | Rice | cytosol | 52.41 | 59.04 |
| CDY57144 | Canola | cytosol | 45.99 | 58.9 |
| CDY21220 | Canola | cytosol | 68.45 | 57.92 |
| Os11t0586200-00 | Rice | cytosol | 42.78 | 52.98 |
| Os08t0117400-01 | Rice | plasma membrane | 37.43 | 47.3 |
| AT2G41090.1 | Thale cress | cytosol | 47.06 | 46.07 |
| TraesCS4B01G131100.1 | Wheat | cytosol | 55.08 | 44.59 |
| TraesCS4D01G126100.1 | Wheat | cytosol | 56.68 | 43.98 |
| Os05t0491000-01 | Rice | cytosol | 36.36 | 43.87 |
| HORVU4Hr1G026290.3 | Barley | cytosol, plastid | 48.13 | 40.72 |
| Os05t0577500-01 | Rice | cytosol, mitochondrion | 33.69 | 36.42 |
| Os10t0389000-01 | Rice | plasma membrane | 35.29 | 34.55 |
| Os01t0505600-01 | Rice | cytosol | 38.5 | 34.12 |
| Os07t0618800-01 | Rice | plasma membrane | 32.09 | 28.71 |
| AT2G41100.1 | Thale cress | cytosol | 47.06 | 27.16 |
| Os01t0604500-01 | Rice | cytosol | 35.83 | 26.91 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | EntrezGene:4327351 | EMBL:AK070889 | ProteinID:BAB89640.1 | ProteinID:BAF06497.1 |
| ProteinID:BAS74867.1 | ProteinID:EAZ13896.1 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0046872 | InterPro:IPR002048 |
| EnsemblPlantsGene:Os01g0810300 | EnsemblPlants:Os01t0810300-01 | PFAM:PF13499 | ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR23050 |
| PANTHER:PTHR23050:SF306 | UniProt:Q8S1Y9 | SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI00000A2010 | RefSeq:XP_015648906.1 |
| SEG:seg | : | : | : | : | : |
Description
CALMODULIN 61Similar to Calmodulin-like protein. (Os01t0810300-01)
Coordinates
chr1:+:34421011..34423534
Molecular Weight (calculated)
20978.6 Da
IEP (calculated)
4.464
GRAVY (calculated)
-0.791
Length
187 amino acids
Sequence
(BLAST)
(BLAST)
001: MADQLSEEQI GEFREAFSLF DKDGDGSITT KELGTVMRSL GQNPTEAELQ DMISEVDTDS NGNIEFKEFL GLMARKLRDK DSEEELKEAF RVFDKDQNGF
101: ISATELRHVM ANIGERLTDE EVGEMISEAD VDGDGQINYE EFVKCMMAKK RRKRIEEKRD HDGGSRTKSA GPSAAPASKR GQKCVIL
101: ISATELRHVM ANIGERLTDE EVGEMISEAD VDGDGQINYE EFVKCMMAKK RRKRIEEKRD HDGGSRTKSA GPSAAPASKR GQKCVIL
001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIKEAD VDGDGQINYE EFVKVMMAK
101: ISAAELRHVM TNLGEKLTDE EVDEMIKEAD VDGDGQINYE EFVKVMMAK
Arabidopsis Description
CAM5Calmodulin 5 [Source:UniProtKB/TrEMBL;Acc:F4IVN6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.