Factsheet for Os09t0479800-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0267900-01
Os01t0279300-01
Os01t0810300-01
Os03t0319300-01
Os04t0469500-01
Os05t0491000-01
Os05t0491100-01
Os05t0524400-01
Os07t0687200-02
Os09t0479800-01
Os12t0603800-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G47810.1	Os01t0267900-01	AT2G41090.1	17360592
AT5G47810.1	Os01t0279300-01	AT2G41090.1	17360592
AT5G47810.1	Os01t0810300-01	AT2G41090.1	17360592
AT5G47810.1	Os03t0319300-01	AT2G41090.1	17360592
AT5G47810.1	Os05t0491000-01	AT2G41090.1	17360592
AT5G47810.1	Os05t0491100-01	AT2G41090.1	17360592
AT5G47810.1	Os07t0687200-02	AT2G41090.1	17360592
AT5G47810.1	Os12t0603800-00	AT2G41090.1	17360592
AT5G47810.1	Os01t0267900-01	AT5G21274.1	17360592
AT5G47810.1	Os01t0279300-01	AT5G21274.1	17360592
AT5G47810.1	Os01t0810300-01	AT5G21274.1	17360592
AT5G47810.1	Os03t0319300-01	AT5G21274.1	17360592
AT5G47810.1	Os05t0491000-01	AT5G21274.1	17360592
AT5G47810.1	Os05t0491100-01	AT5G21274.1	17360592
AT5G47810.1	Os07t0687200-02	AT5G21274.1	17360592
AT5G47810.1	Os12t0603800-00	AT5G21274.1	17360592
AT5G47810.1	Os04t0469500-01	AT5G47810.1	21798944
AT5G47810.1	Os09t0479800-01	AT5G47810.1	21798944
AT5G47810.1	Os05t0524400-01	AT5G56630.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020866_P001	Maize	cytosol	22.8	72.11
Bra024914.1-P	Field mustard	cytosol	63.87	66.89
CDX77799	Canola	cytosol	63.87	66.89
CDY17703	Canola	cytosol	63.66	66.67
AT5G47810.1	Thale cress	cytosol, mitochondrion	63.01	65.99
Solyc04g015200.2.1	Tomato	plastid	63.44	64.69
PGSC0003DMT400050810	Potato	plastid	63.01	64.25
KRH51223	Soybean	endoplasmic reticulum, nucleus	63.23	64.05
VIT_00s0780g00010.t01	Wine grape	cytosol	63.01	63.28
Os04t0469500-01	Rice	plasma membrane	61.72	58.93
KXG26277	Sorghum	cytosol	19.14	56.33
Os05t0194900-01	Rice	cytosol	31.18	50.35
Os01t0191700-01	Rice	plasma membrane	50.75	44.44
Os05t0524400-01	Rice	nucleus	49.25	40.39
Os06t0151900-01	Rice	cytosol, plasma membrane	13.33	39.74
Os10t0405600-01	Rice	plastid	39.35	34.92
Os09t0415800-01	Rice	plastid	38.06	33.59
Os08t0439000-01	Rice	cytosol	9.89	16.67

Protein Annotations

KEGG:00010+2.7.1.11	KEGG:00030+2.7.1.11	KEGG:00051+2.7.1.11	KEGG:00052+2.7.1.11	KEGG:00680+2.7.1.11	Gene3D:3.40.50.450
MapMan:35.1	EntrezGene:4347383	EMBL:AK109585	InterPro:ATP_PFK	ProteinID:BAD33387.1	ProteinID:BAD46334.1
ProteinID:BAF25396.1	ProteinID:BAT08631.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003872
GO:GO:0004252	GO:GO:0005488	GO:GO:0005524	GO:GO:0005975	GO:GO:0006002	GO:GO:0006091
GO:GO:0006096	GO:GO:0006139	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0016787
GO:GO:0019538	GO:GO:0061615	EnsemblPlantsGene:Os09g0479800	EnsemblPlants:Os09t0479800-01	PFAM:PF00365	PIRSF:PIRSF000534
InterPro:PKF_sf	PRINTS:PR00476	PANTHER:PTHR13697	PANTHER:PTHR13697:SF11	InterPro:Phosphofructokinase_dom	InterPro:PyroP-dep_PFK_TP0108
UniProt:Q69QS5	SUPFAM:SSF53784	UniParc:UPI00003FF377	RefSeq:XP_015611031.1	SEG:seg	:

Description

endosperm-specific gene 130, phosphofructokinase 9Similar to Pyrophosphate-dependent phosphofructo-1-kinase-like protein. (Os09t0479800-01)

Coordinates

chr9:+:18411578..18413163

Molecular Weight (calculated)

49752.9 Da

IEP (calculated)

6.696

GRAVY (calculated)

-0.103

Length

465 amino acids

Sequence
(BLAST)

001: MDDDGETPMP SLELHKLPTL AGAAIPNPIA RHPLYHPSPS FFISPTDVVL RDILFDASPA SAAGERRRRH VAAYHRAGPR REVAFDPATV RAAIFTCGGL
101: CPGTNTVVRE LVVGLSELYG VRGGVFGVRN GYRGFYSDEV VPLDPAAVEH WHKAGGAALG TSRGGFDLAR IVDAIERHGF NQVYAVGGDG TMRGAARIHR
201: EVRRRGRLAV AVAGIPKTVD NDVGVVDRSF GFHTAVEAAQ QAIAAGHVEA ESAANGVGLV KLMGRSAGHI ALHATLSSRD VDCCLIPEED FYLRGAGGLF
301: DFLYRRIKDN GHAVVVVAEG AGQRLIPRTT TTSASGACAG ADESGNETFL DVGAWLKAEM RAWWEEEHAG EVFTVKYIDP TYMIRAVPAN AGDNLYCTLL
401: AHAAIHGAMA GYTGFVSGTI NGNYAYIPMD EVAEAKNPVD TKDHKWAWVR SITNQPDFIR AGPTS

Best Arabidopsis Sequence Match ( AT5G47810.1 )
(BLAST)

001: MAAETSIRKL PSLSGLRHRR NPLEDNPYFH PSNGFYITPS DVILAQVAYD HSAHSQSRVA YHRAGPRREI MYEPSAVKAA IVTCGGLCPG MNTVIRELVV
101: GLWELYGVRE IYGIPAGYRG FYSMKAVKLD PKAVHDWHKK GGTVLATSRG GFHLQKIVDA IHLNGYNQVY IIGGDGTMRG AVEIFKEISL RKLEVGITVI
201: PKTVDNDVGI IDRSFGFQTA VEMAQEAISA AHVEAESAVN GIGLVKLMGR STGHIALHAT LSSRDVDCCL IPEMDFYLEG KGGLFEFLEK RLKERGHAVL
301: VVAEGAGQEM IPRNESQKQE RDESGNAVFL DVGVWFKSVL KAWWEREHPD ELFTVKYIDP TYMIRAVPAN ATDNLYCTLL AHSAIHGVMA GYTGFVPGPI
401: NGNYAYIPLE EVAQTKNQVN TRDHKWAWVR SVTNQPDFET NVKG

Arabidopsis Description

PFK2ATP-dependent 6-phosphofructokinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIK0]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.