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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • mitochondrion 2
  • cytosol 3
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:mitochondrion
MultiLoc:cytosol
Predotar:plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX73678
CDX77799
CDX88580
CDX92401
CDX93710
CDX95314
CDX99958
CDY03977
CDY07887
CDY11911
CDY17703
CDY20715
CDY23174
CDY32769
CDY32873
CDY41800
CDY65216
CDY68743
CDY72240

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G47810.1 CDX73678 AT3G51920.1 17360592
AT5G47810.1 CDX95314 AT3G51920.1 17360592
AT5G47810.1 CDY23174 AT3G51920.1 17360592
AT5G47810.1 CDX92401 AT5G21274.1 17360592
AT5G47810.1 CDX77799 AT5G47810.1 21798944
AT5G47810.1 CDY17703 AT5G47810.1 21798944
AT5G47810.1 CDX88580 AT5G56630.1 21798944
AT5G47810.1 CDX93710 AT5G56630.1 21798944
AT5G47810.1 CDX99958 AT5G56630.1 21798944
AT5G47810.1 CDY03977 AT5G56630.1 21798944
AT5G47810.1 CDY07887 AT5G56630.1 21798944
AT5G47810.1 CDY11911 AT5G56630.1 21798944
AT5G47810.1 CDY20715 AT5G56630.1 21798944
AT5G47810.1 CDY32769 AT5G56630.1 21798944
AT5G47810.1 CDY32873 AT5G56630.1 21798944
AT5G47810.1 CDY41800 AT5G56630.1 21798944
AT5G47810.1 CDY65216 AT5G56630.1 21798944
AT5G47810.1 CDY68743 AT5G56630.1 21798944
AT5G47810.1 CDY72240 AT5G56630.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra024914.1-P Field mustard cytosol 99.55 99.55
CDX77799 Canola cytosol 97.75 97.75
AT5G47810.1 Thale cress cytosol, mitochondrion 87.84 87.84
HORVU2Hr1G081670.3 Barley cytosol, golgi, mitochondrion 61.94 74.12
Solyc04g015200.2.1 Tomato plastid 75.68 73.68
PGSC0003DMT400050810 Potato plastid 75.45 73.46
VIT_00s0780g00010.t01 Wine grape cytosol 75.9 72.79
KRH51223 Soybean endoplasmic reticulum, nucleus 75.0 72.55
GSMUA_Achr5P22470_001 Banana cytosol 74.55 70.28
GSMUA_Achr9P19740_001 Banana cytosol 64.64 67.85
TraesCS2D01G331200.1 Wheat cytosol 69.14 65.46
Zm00001d020866_P001 Maize cytosol 21.62 65.31
TraesCS2B01G350500.1 Wheat cytosol 68.92 65.25
TraesCS2A01G331700.1 Wheat golgi 68.92 65.25
Zm00001d025659_P001 Maize cytosol, plastid 69.37 64.57
EES12338 Sorghum cytosol 70.27 64.46
Os09t0479800-01 Rice cytosol, plasma membrane 66.67 63.66
Os04t0469500-01 Rice plasma membrane 66.44 60.57
TraesCS4B01G125000.1 Wheat cytosol 9.46 54.55
CDY32769 Canola cytosol 44.82 53.93
KXG26277 Sorghum cytosol 19.14 53.8
CDX75291 Canola cytosol 53.6 51.4
CDX68896 Canola cytosol 53.38 51.19
CDY69051 Canola cytosol 54.28 50.52
CDY11911 Canola cytosol 53.83 50.0
CDY48604 Canola cytosol 53.15 49.89
CDX89351 Canola cytosol 54.5 49.49
CDX94352 Canola cytosol 54.5 49.49
CDY06829 Canola cytosol 53.15 49.27
CDX88580 Canola cytosol 53.6 49.07
CDY32873 Canola cytosol 53.83 48.98
CDY41800 Canola cytosol 52.93 48.45
CDY20715 Canola cytosol 53.38 48.37
CDY02131 Canola plastid 54.05 45.11
CDY23054 Canola plastid 54.05 45.11
CDY65216 Canola cytosol, mitochondrion 6.31 44.44
CDY52512 Canola mitochondrion 42.79 37.77
CDX90382 Canola plastid 43.02 37.3
CDY68743 Canola cytosol, plastid 12.16 36.73
CDX76918 Canola plastid 43.47 35.81
CDY13756 Canola plastid 43.24 35.62
CDX93710 Canola mitochondrion 12.84 34.76
CDY72240 Canola cytosol 11.71 33.99
CDX99958 Canola plastid 11.04 31.82
CDY03977 Canola cytosol 12.39 31.79
CDY07887 Canola extracellular, plasma membrane 10.81 19.83
Protein Annotations
KEGG:00010+2.7.1.11KEGG:00030+2.7.1.11KEGG:00051+2.7.1.11KEGG:00052+2.7.1.11KEGG:00680+2.7.1.11Gene3D:3.40.50.450
MapMan:35.1GO:A0A078FZE1UniProt:A0A078FZE1InterPro:ATP_PFKEnsemblPlants:CDY17703ProteinID:CDY17703
ProteinID:CDY17703.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0003872GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005975
GO:GO:0006002GO:GO:0006091GO:GO:0006096GO:GO:0006139GO:GO:0008150GO:GO:0008152
GO:GO:0009056GO:GO:0009058GO:GO:0009987GO:GO:0016301GO:GO:0016310GO:GO:0016740
GO:GO:0046872GO:GO:0061615EnsemblPlantsGene:GSBRNA2T00001926001HAMAP:MF_01981PFAM:PF00365PIRSF:PIRSF000534
InterPro:PKF_sfPRINTS:PR00476PANTHER:PTHR13697PANTHER:PTHR13697:SF11MetaCyc:PWY-1042MetaCyc:PWY-1861
MetaCyc:PWY-5484MetaCyc:PWY-7385InterPro:Phosphofructokinase_domInterPro:PyroP-dep_PFK_TP0108SUPFAM:SSF53784UniPathway:UPA00109
UniParc:UPI0004EEDB01:::::
Description
BnaA06g35220DATP-dependent 6-phosphofructokinase [Source:UniProtKB/TrEMBL;Acc:A0A078FZE1]
Coordinates
chrLK032076:+:661432..663384
Molecular Weight (calculated)
48950.4 Da
IEP (calculated)
6.408
GRAVY (calculated)
-0.182
Length
444 amino acids
Sequence
(BLAST)
001: MANATSIKDL PSLTGLHHRR NPLEENPFFH PSHGFYISPS DVVLSQVVYD LSDASQPHVA YHRAGPRREI LYEPSSVKAA IVTCGGLCPG MNTVIRELVV
101: GLWELYGVRE IYGIPAGYRG FYSMEAVELN PKLVHNWHKR GGTVLATSRG GFDLCKIVDA IQQNGYNQVY IIGGDGTMRG AVKIFDEVSR RKLKVGITGI
201: PKTVDNDVGI IDRSFGFQTA VEMAQEAISA AHVEAESAVN GIGLVKLMGR STGHIALHAT LSSRDVDCCL IPEMGFYLEG KGGLFEFLEQ RLKDHGHAVL
301: VVAEGAGQEI IPRNEAQKQE RDESGNLVFL DVGVWLKSAL KEWWEREHPK ELFTVKYIDP TYMIRAVPAN ATDNSYCTLL AHSSIHGVMA GYTGFVSGPI
401: NGNYAYIPLE EVAQTKNEVN TSDPKWAWVR SVTNQPDFET NFKG
Best Arabidopsis Sequence Match ( AT5G47810.1 )
(BLAST)
001: MAAETSIRKL PSLSGLRHRR NPLEDNPYFH PSNGFYITPS DVILAQVAYD HSAHSQSRVA YHRAGPRREI MYEPSAVKAA IVTCGGLCPG MNTVIRELVV
101: GLWELYGVRE IYGIPAGYRG FYSMKAVKLD PKAVHDWHKK GGTVLATSRG GFHLQKIVDA IHLNGYNQVY IIGGDGTMRG AVEIFKEISL RKLEVGITVI
201: PKTVDNDVGI IDRSFGFQTA VEMAQEAISA AHVEAESAVN GIGLVKLMGR STGHIALHAT LSSRDVDCCL IPEMDFYLEG KGGLFEFLEK RLKERGHAVL
301: VVAEGAGQEM IPRNESQKQE RDESGNAVFL DVGVWFKSVL KAWWEREHPD ELFTVKYIDP TYMIRAVPAN ATDNLYCTLL AHSAIHGVMA GYTGFVPGPI
401: NGNYAYIPLE EVAQTKNQVN TRDHKWAWVR SVTNQPDFET NVKG
Arabidopsis Description
PFK2ATP-dependent 6-phosphofructokinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIK0]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.