CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
CDY21099
CDY21100
CDY50165
CDY50167

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G56630.1	CDY21099	AT1G13520.1	21798944
AT5G56630.1	CDY21100	AT1G13520.1	21798944
AT5G56630.1	CDY50165	AT1G13520.1	21798944
AT5G56630.1	CDY50167	AT1G13520.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72240	Canola	cytosol	53.97	22.22
PGSC0003DMT400095815	Potato	cytosol	52.38	21.15
CDY03977	Canola	cytosol	47.62	17.34
CDY32769	Canola	cytosol	69.84	11.92
CDY41800	Canola	cytosol	69.84	9.07
CDY32873	Canola	cytosol	69.84	9.02
CDY69051	Canola	cytosol	68.25	9.01
AT5G56630.1	Thale cress	cytosol	68.25	8.87
CDX89351	Canola	cytosol	68.25	8.79
CDX94352	Canola	cytosol	68.25	8.79
CDY20715	Canola	cytosol	68.25	8.78
CDY11911	Canola	cytosol	63.49	8.37
CDX88580	Canola	cytosol	63.49	8.25
CDX68896	Canola	cytosol	60.32	8.21
CDX75291	Canola	cytosol	60.32	8.21
KRG92178	Soybean	cytosol, plastid	41.27	7.83
GSMUA_Achr1P04940_001	Banana	cytosol	58.73	7.66
GSMUA_Achr4P08240_001	Banana	cytosol	55.56	7.46
CDY48604	Canola	cytosol	55.56	7.4
CDY06829	Canola	cytosol	55.56	7.31
PGSC0003DMT400070848	Potato	cytosol	53.97	7.26
Solyc07g045160.2.1	Tomato	cytosol	55.56	7.14
VIT_11s0016g02850.t01	Wine grape	cytosol	55.56	7.13
GSMUA_Achr4P01040_001	Banana	cytosol	60.32	7.01
GSMUA_Achr7P13640_001	Banana	cytosol	53.97	7.0
PGSC0003DMT400044886	Potato	cytosol	55.56	6.94
GSMUA_Achr2P16600_001	Banana	cytosol	52.38	6.73
CDY07887	Canola	extracellular, plasma membrane	25.4	6.61
Solyc04g072580.1.1	Tomato	cytosol	50.79	6.41
CDY02131	Canola	plastid	53.97	6.39
CDX77799	Canola	cytosol	44.44	6.31
CDY17703	Canola	cytosol	44.44	6.31
CDY23054	Canola	plastid	52.38	6.2
GSMUA_Achr7P10770_001	Banana	cytosol	42.86	5.59
Os05t0524400-01	Rice	nucleus	49.21	5.47
Zm00001d038775_P002	Maize	extracellular	49.21	5.39
TraesCS1B01G357000.1	Wheat	cytosol	47.62	5.3
TraesCS1D01G346200.1	Wheat	golgi	47.62	5.27
TraesCS1A01G344000.1	Wheat	nucleus	47.62	5.27
CDY52512	Canola	mitochondrion	39.68	4.97
TraesCS3B01G311900.2	Wheat	cytosol	49.21	4.91
CDX90382	Canola	plastid	39.68	4.88
CDY13756	Canola	plastid	41.27	4.82
CDX76918	Canola	plastid	41.27	4.82
HORVU1Hr1G075550.1	Barley	plastid	47.62	4.69
HORVU3Hr1G070300.3	Barley	cytosol, plastid	47.62	4.57
Zm00001d043563_P002	Maize	cytosol, extracellular	49.21	4.06
TraesCS3A01G277700.1	Wheat	cytosol	49.21	4.04
TraesCS3D01G278000.1	Wheat	cytosol	49.21	3.99
OQU87495	Sorghum	cytosol	49.21	3.97
GSMUA_Achr4P15420_001	Banana	cytosol	22.22	3.88
OQU78332	Sorghum	mitochondrion	50.79	2.94
CDY68743	Canola	cytosol, plastid	3.17	1.36
CDX99958	Canola	plastid	3.17	1.3
CDX93710	Canola	mitochondrion	3.17	1.22

Protein Annotations

KEGG:00010+2.7.1.11	KEGG:00030+2.7.1.11	KEGG:00051+2.7.1.11	KEGG:00052+2.7.1.11	KEGG:00680+2.7.1.11	MapMan:35.1
GO:A0A078JHQ2	UniProt:A0A078JHQ2	EnsemblPlants:CDY65216	ProteinID:CDY65216	ProteinID:CDY65216.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0003872	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0061615	EnsemblPlantsGene:GSBRNA2T00045411001	InterPro:PKF_sf	PANTHER:PTHR13697	PANTHER:PTHR13697:SF34
MetaCyc:PWY-1042	MetaCyc:PWY-1861	MetaCyc:PWY-5484	MetaCyc:PWY-7385	SUPFAM:SSF53784	UniPathway:UPA00109
UniParc:UPI0004EF36D0	:	:	:	:	:

Description

BnaCnng46090DBnaCnng46090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JHQ2]

Coordinates

chrLK034696:+:7282..7553

Molecular Weight (calculated)

7146.6 Da

IEP (calculated)

9.864

GRAVY (calculated)

0.165

Length

63 amino acids

Sequence
(BLAST)

1: MVMNLKYVDP AYMIRTVSTN ASNTVYFRLL AQSVVHGAVA GYTSYISSLI NRRQTYIPYS VSY

Best Arabidopsis Sequence Match ( AT4G26270.1 )
(BLAST)

001: MSTVESSKPK IINGSCGYVL EDVPHLSDYL PGLPTYPNPL QDNPAYSVVK QYFVDADDSV PQKIVVHKDG PRGIHFRRAG PRQKVYFESD EVHACIVTCG
101: GLCPGLNTVI REIVSSLSYM YGVKRILGID GGYRGFYAKN TVSLDSKVVN DIHKRGGTIL GTSRGGHDTT KIVDSIQDRG INQVYIIGGD GTQRGASVIF
201: EEIRRRGLKV AVIGIPKTID NDIPVIDKSF GFDTAVEEAQ RAINAAHVEA ESIENGIGVV KLMGRYSGFI AMYATLASRD VDCCLIPESP FYLEGEGGLF
301: EYIEKRLKES GHMVLVIAEG AGQDLMSKSM ESMTLKDASG NKLLKDVGLW LSQSIKDHFN QKKMVMNLKY IDPTYMIRAV PSNASDNVYC TLLAQSAVHG
401: AMAGYTGYIS GLVNGRQTYI PFYRITEKQN HVVITDRMWA RLLSSTNQPS FLGPKDVFDN KEKPMSALLD DGNCNGVVDV PPVTKEITK

Arabidopsis Description

PFK3ATP-dependent 6-phosphofructokinase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q94AA4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.