Factsheet for Zm00001d043563_P002

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d027427_P001
Zm00001d029740_P002
Zm00001d038775_P002
Zm00001d043563_P002
Zm00001d047354_P001
Zm00001d048473_P003
Zm00001d050302_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G26270.1	Zm00001d027427_P001	AT3G57870.1	21798944
AT4G26270.1	Zm00001d029740_P002	AT3G57870.1	21798944
AT4G26270.1	Zm00001d047354_P001	AT3G57870.1	21798944
AT4G26270.1	Zm00001d048473_P003	AT3G57870.1	21798944
AT4G29220.1	Zm00001d050302_P001	AT1G13520.1	21798944
AT4G29220.1	Zm00001d027427_P001	AT3G57870.1	21798944
AT4G29220.1	Zm00001d029740_P002	AT3G57870.1	21798944
AT4G29220.1	Zm00001d047354_P001	AT3G57870.1	21798944
AT4G29220.1	Zm00001d048473_P003	AT3G57870.1	21798944
AT4G29220.1	Zm00001d038775_P002	AT4G29220.1	21798944
AT4G29220.1	Zm00001d043563_P002	AT4G29220.1	21798944
AT5G56630.1	Zm00001d050302_P001	AT1G13520.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU87495	Sorghum	cytosol	91.62	89.63
TraesCS3B01G311900.2	Wheat	cytosol	67.28	81.33
Zm00001d038775_P002	Maize	extracellular	60.34	80.17
GSMUA_Achr4P08240_001	Banana	cytosol	46.99	76.55
HORVU3Hr1G070300.3	Barley	cytosol, plastid	65.71	76.41
GSMUA_Achr1P04940_001	Banana	cytosol	47.51	75.16
TraesCS3A01G277700.1	Wheat	cytosol	75.0	74.71
Bra011387.1-P	Field mustard	cytosol	44.9	74.08
CDX75291	Canola	cytosol	44.9	74.08
CDX68896	Canola	cytosol	44.76	73.87
AT4G32840.1	Thale cress	cytosol	44.63	73.81
TraesCS3D01G278000.1	Wheat	cytosol	74.74	73.58
VIT_04s0008g00520.t01	Wine grape	cytosol	45.94	71.93
Solyc12g095880.1.1	Tomato	cytosol	45.55	71.75
KRH60181	Soybean	cytosol, nucleus	44.11	71.55
KRH41464	Soybean	cytosol	44.24	71.46
KRH47193	Soybean	cytosol	43.32	71.34
VIT_11s0016g02850.t01	Wine grape	cytosol	45.81	71.28
CDY48604	Canola	cytosol	44.11	71.25
AT5G56630.1	Thale cress	cytosol	45.03	70.93
KRH44258	Soybean	cytosol	42.41	70.74
CDY32873	Canola	cytosol	45.16	70.7
CDY69051	Canola	cytosol	44.11	70.65
Bra002801.1-P	Field mustard	cytosol	45.03	70.49
CDY11911	Canola	cytosol	43.98	70.29
Solyc07g045160.2.1	Tomato	cytosol	45.03	70.2
CDY32769	Canola	cytosol	33.9	70.19
CDY06829	Canola	cytosol	43.98	70.15
CDY41800	Canola	cytosol	44.5	70.1
CDY20715	Canola	cytosol	44.9	70.0
KRH62114	Soybean	endoplasmic reticulum	46.6	69.94
AT4G29220.1	Thale cress	cytosol	43.19	69.77
AT4G26270.1	Thale cress	cytosol	44.63	69.73
CDX94352	Canola	cytosol	44.5	69.53
CDX89351	Canola	cytosol	44.5	69.53
Bra006864.1-P	Field mustard	cytosol	44.11	69.48
Bra026452.1-P	Field mustard	cytosol	44.5	69.39
CDX88580	Canola	cytosol	43.98	69.28
PGSC0003DMT400065447	Potato	cytosol	43.85	69.21
PGSC0003DMT400070848	Potato	cytosol	42.02	68.59
PGSC0003DMT400044886	Potato	cytosol	45.16	68.45
Zm00001d008816_P001	Maize	extracellular	47.51	68.36
GSMUA_Achr4P01040_001	Banana	cytosol	48.3	68.08
KRH23377	Soybean	cytosol	42.8	67.98
Solyc08g066100.2.1	Tomato	cytosol	44.11	67.4
Zm00001d039499_P002	Maize	cytosol	46.47	67.23
GSMUA_Achr4P15420_001	Banana	cytosol	31.02	65.65
KRH52812	Soybean	endoplasmic reticulum	46.73	65.5
Zm00001d010375_P001	Maize	cytosol	46.07	65.43
KRH49011	Soybean	endoplasmic reticulum	45.68	65.11
CDY02131	Canola	plastid	45.29	65.04
Zm00001d036206_P001	Maize	cytosol	46.99	65.04
Zm00001d045326_P004	Maize	cytosol	46.07	64.94
Bra012940.1-P	Field mustard	plastid	45.16	64.85
CDY23054	Canola	plastid	45.16	64.85
Solyc04g072580.1.1	Tomato	cytosol	42.28	64.73
Bra011089.1-P	Field mustard	cytosol, plastid	45.16	64.61
KRH74196	Soybean	endoplasmic reticulum	45.55	64.56
Zm00001d028635_P001	Maize	cytosol	9.29	64.55
Zm00001d037910_P001	Maize	cytosol	44.37	64.45
KRH34610	Soybean	plastid	43.85	64.18
VIT_16s0013g01140.t01	Wine grape	plastid	44.76	64.17
AT5G61580.1	Thale cress	plastid	44.37	63.96
KRH09958	Soybean	nucleus	42.67	62.45
Solyc03g093520.2.1	Tomato	plastid	42.8	60.67
PGSC0003DMT400095815	Potato	cytosol	12.17	59.62
Zm00001d020866_P001	Maize	cytosol	10.47	54.42
CDY65216	Canola	cytosol, mitochondrion	4.06	49.21
Zm00001d025659_P001	Maize	cytosol, plastid	30.37	48.64
Zm00001d032172_P002	Maize	plastid	28.4	41.18
KRH55292	Soybean	extracellular	4.45	40.96
KRG92178	Soybean	cytosol, plastid	17.41	40.06
Zm00001d033002_P001	Maize	extracellular	27.23	39.62
Bra033014.1-P	Field mustard	cytosol	7.72	38.56
CDY72240	Canola	cytosol	7.72	38.56
Zm00001d005756_P002	Maize	plastid	28.4	38.27
CDY68743	Canola	cytosol, plastid	7.33	38.1
CDY03977	Canola	cytosol	7.98	35.26
CDX93710	Canola	mitochondrion	7.46	34.76
Zm00001d049731_P001	Maize	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	12.57	34.16
CDX99958	Canola	plastid	6.81	33.77
CDY07887	Canola	extracellular, plasma membrane	8.38	26.45

Protein Annotations

KEGG:00010+2.7.1.11	KEGG:00030+2.7.1.11	KEGG:00051+2.7.1.11	KEGG:00052+2.7.1.11	KEGG:00680+2.7.1.11	EntrezGene:100281464
MapMan:2.1.1.1.1	Gene3D:3.40.50.450	UniProt:A0A1D6NDA8	InterPro:ATP_PFK	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003872	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006002	GO:GO:0006091
GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0046872	GO:GO:0061615
HAMAP:MF_01981	ProteinID:ONM38477.1	PFAM:PF00365	InterPro:PKF_sf	PRINTS:PR00476	PANTHER:PTHR13697
PANTHER:PTHR13697:SF28	InterPro:Phosphofructokinase_dom	InterPro:PyroP-dep_PFK_TP0108	SUPFAM:SSF53784	UniParc:UPI0004DE9256	EnsemblPlantsGene:Zm00001d043563
EnsemblPlants:Zm00001d043563_P002	EnsemblPlants:Zm00001d043563_T002	SEG:seg	:	:	:

Description

ATP-dependent 6-phosphofructokinase 3

Coordinates

chr3:-:203950868..203960201

Molecular Weight (calculated)

83093.7 Da

IEP (calculated)

6.391

GRAVY (calculated)

-0.493

Length

764 amino acids

Sequence
(BLAST)

001: MASSHIILPK EEEEEAAAAA VAEVGLGAAV EADHDHRPYQ EQGPGKAALP FSATCVRISR DSYPNLRALR NASTMTLHDD DAAFVKLEEG DYGYVLDDVP
101: HLTDYLPDLP TFPNPLQDHP AYSTVKQYFV NADDTVPEKV VVQKNSPRGV HFRRAGPRQR VYFESEEAKA CIVTCGGLCP GLNTVIRELV CGLSHMYNVS
201: NVFGIQNGYK GFYSSNYLPM TPKSVNDIHK RGGTVLGTSR GGHDTKKIVD NIQDRGINQV FIIGGDGTQK GAYEIYKEIR RRGLQVAVAG IPKTIDNDIA
301: VIDKSFGFDT AVEEAQRAIN AAHVEASSAE NGIGLVKLMG RYSGFIAMYA TLASRDVDCC LIPESPFYLE GEGGLFEYID RRLKENNHTV IVVAEGAGQD
401: LIAQSIPAAD QQDASGNKLL LDVGLWLTHK IKDYCKSKKM EMTIKYIDPT YMIRAIPSNA SDNVYCTLLA HSAIHGAMAG YSFTVGMVNG RHAYIPFHRV
501: TSTRNKVRIT DRMWARLLSS TNQPSFLSQK DIDAAREADK AANRMKSRED AKKQSTPVLA NGTDGVEAQL AAPILPQQPA TDGPVPQPAR PDVNNATAPD
601: AGDQEEARTT GTDVAGGTLT QAEVKPTPGT NVSWPTTPPD TPERDVAPAP RTEHAQATEM ELDVDTARPE GCTTPPPVQD SEGSDTQSAD CRGSPMHGMQ
701: AGASVKRDDV AASKSRLFAF RSFTRDKKKV IKPAGAADTA SPDSRKTEEA AAENKERRKR FWKR

Best Arabidopsis Sequence Match ( AT5G61580.1 )
(BLAST)

001: MEASISFLGS TKPNISLFNP SSNVLPRRDF PLPALKLKKV SVLPRILHQK RLIRAQCSDG FKPEEDDGFV LEDVPHLTKF LPDLPSYPNP LKESQAYAIV
101: KRTFVSSEDV VAQNIVVQKG SKRGVHFRRA GPRERVYFRS DEVKACIVTC GGLCPGINTV IREIVCGLNN MYGVNNILGI QGGYRGFYSK NTMNLTPKVV
201: NDIHKRGGTF LQTSRGGHDT AKIVDNIQDR GINQVYIIGG GGTQKGAEKI YEEVERRGLQ VAVSGIPKTI DNDIAVIDKS FGFDTAVEEA QRAINAAHVE
301: VESVENGVGI VKLMGRYSGF IAMIATLANR DVDCCLIPES PFFLEGKGGL FEFIEERLKE NRHMVIVIAE GAGQDYVAQS MRASETKDAS GNRLLLDVGL
401: WLTQQIKDHF TNVRKMMINM KYIDPTYMIR AIPSNASDNV YCTLLAQSAV HGAMAGYSGF TVGPVNSRHA YIPISQVTEV TNTVKLTDRM WARLLASTNQ
501: PSFLTGEGAL QNVIDMETQE KIDNMKISSI

Arabidopsis Description

PFK4ATP-dependent 6-phosphofructokinase [Source:UniProtKB/TrEMBL;Acc:A0A178UCI3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.