Factsheet for VIT_04s0008g00520.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0016g02850.t01	Wine grape	cytosol	82.58	82.08
GSMUA_Achr2P16600_001	Banana	cytosol	81.35	81.02
Bra011387.1-P	Field mustard	cytosol	76.02	80.13
CDX68896	Canola	cytosol	76.02	80.13
CDX75291	Canola	cytosol	76.02	80.13
GSMUA_Achr4P08240_001	Banana	cytosol	76.43	79.53
GSMUA_Achr7P13640_001	Banana	cytosol	79.1	79.42
KRH62114	Soybean	endoplasmic reticulum	81.97	78.59
AT4G32840.1	Thale cress	cytosol	74.18	78.36
Solyc12g095880.1.1	Tomato	cytosol	77.46	77.94
GSMUA_Achr1P04940_001	Banana	cytosol	76.64	77.43
PGSC0003DMT400065447	Potato	cytosol	73.77	74.38
KRH52812	Soybean	endoplasmic reticulum	81.56	73.03
Solyc08g066100.2.1	Tomato	cytosol	73.77	72.0
GSMUA_Achr4P15420_001	Banana	cytosol	50.61	68.42
GSMUA_Achr4P01040_001	Banana	cytosol	75.82	68.27
GSMUA_Achr7P10770_001	Banana	cytosol	64.55	65.22
VIT_16s0013g01140.t01	Wine grape	plastid	69.67	63.79
Os05t0524400-01	Rice	nucleus	72.54	62.43
TraesCS1B01G357000.1	Wheat	cytosol	70.7	60.95
TraesCS1A01G344000.1	Wheat	nucleus	70.7	60.63
TraesCS1D01G346200.1	Wheat	golgi	70.49	60.46
Zm00001d038775_P002	Maize	extracellular	70.9	60.17
TraesCS3B01G311900.2	Wheat	cytosol	71.72	55.38
HORVU1Hr1G075550.1	Barley	plastid	71.31	54.46
HORVU3Hr1G070300.3	Barley	cytosol, plastid	72.13	53.58
VIT_00s0780g00010.t01	Wine grape	cytosol	48.77	51.4
Zm00001d043563_P002	Maize	cytosol, extracellular	71.93	45.94
TraesCS3A01G277700.1	Wheat	cytosol	72.13	45.89
TraesCS3D01G278000.1	Wheat	cytosol	72.34	45.49
OQU87495	Sorghum	cytosol	72.54	45.33
VIT_14s0108g00540.t01	Wine grape	cytosol	44.47	45.21
VIT_00s0199g00240.t01	Wine grape	cytosol	38.52	39.92
VIT_00s0199g00220.t01	Wine grape	plastid	39.34	36.78
OQU78332	Sorghum	mitochondrion	70.9	31.77

Protein Annotations

KEGG:00010+2.7.1.11	KEGG:00030+2.7.1.11	KEGG:00051+2.7.1.11	KEGG:00052+2.7.1.11	KEGG:00680+2.7.1.11	EntrezGene:100245746
wikigene:100245746	MapMan:2.1.1.1.1	Gene3D:3.40.50.450	EMBL:AM466516	InterPro:ATP_PFK	ProteinID:CAN74837
ProteinID:CAN74837.1	ProteinID:CBI20597	ProteinID:CBI20597.3	UniProt:D7STJ8	EMBL:FN595231	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003872	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005975	GO:GO:0006002
GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0046872
GO:GO:0061615	EntrezGene:LOC100245746	wikigene:LOC100245746	HAMAP:MF_01981	PFAM:PF00365	PIRSF:PIRSF000534
InterPro:PKF_sf	PRINTS:PR00476	PANTHER:PTHR13697	PANTHER:PTHR13697:SF31	InterPro:Phosphofructokinase_dom	InterPro:PyroP-dep_PFK_TP0108
SUPFAM:SSF53784	TIGR:TC53728	TIGR:TC70414	UniParc:UPI00015C873E	ArrayExpress:VIT_04s0008g00520	EnsemblPlantsGene:VIT_04s0008g00520
EnsemblPlants:VIT_04s0008g00520.t01	unigene:Vvi.6598	RefSeq:XP_002275308	RefSeq:XP_002275308.1	:	:

Description

ATP-dependent 6-phosphofructokinase [Source:UniProtKB/TrEMBL;Acc:D7STJ8]

Coordinates

chr4:+:458271..466257

Molecular Weight (calculated)

53480.9 Da

IEP (calculated)

7.401

GRAVY (calculated)

-0.265

Length

488 amino acids

Sequence
(BLAST)

001: MESSNNASTT KVITGDAGYV LEDVPHLNDY IQGLPTYPNQ LQTNPAYSVV KQYFVNVDDS VAQKIVCHKN SPRGTHFRRA GPRQKVYFES DEVHACIVTC
101: GGLCPGLNTV IREIVCGLSH MYGVTRILGI DGGYKGFYSR NTIPLTPKVV NDIHKRGGTV LGTSRGGHDT SKIVDSIQDR GINQVYIIGG DGTQKGASVI
201: FEEIRRRGLK VAVAGIPKTI DNDIPVIDKS FGFDTAVEEA QRAINAAHVE SESIENGIGM VKLMGRYSGF IAMYATLASR DVDCCLIPES PFYLEGKGGL
301: FEFIERRLKE NGHMVIVMAE GAGQELLSES LLSMGQDASG NNLLQDVGLW MSHRIKDHFA RQRKIAINLK YIDPTYMIRA IPGNASDNVY CTLLAQSAVH
401: GAMAGYTGFT IGIVNGRHAY IPFHRINESR NKVVITDRMW ARLLSSTNQP SFQNPKDVAE VKKEEAPATG LLDGDNSKDD HKPVDQKA

Best Arabidopsis Sequence Match ( AT4G26270.1 )
(BLAST)

001: MSTVESSKPK IINGSCGYVL EDVPHLSDYL PGLPTYPNPL QDNPAYSVVK QYFVDADDSV PQKIVVHKDG PRGIHFRRAG PRQKVYFESD EVHACIVTCG
101: GLCPGLNTVI REIVSSLSYM YGVKRILGID GGYRGFYAKN TVSLDSKVVN DIHKRGGTIL GTSRGGHDTT KIVDSIQDRG INQVYIIGGD GTQRGASVIF
201: EEIRRRGLKV AVIGIPKTID NDIPVIDKSF GFDTAVEEAQ RAINAAHVEA ESIENGIGVV KLMGRYSGFI AMYATLASRD VDCCLIPESP FYLEGEGGLF
301: EYIEKRLKES GHMVLVIAEG AGQDLMSKSM ESMTLKDASG NKLLKDVGLW LSQSIKDHFN QKKMVMNLKY IDPTYMIRAV PSNASDNVYC TLLAQSAVHG
401: AMAGYTGYIS GLVNGRQTYI PFYRITEKQN HVVITDRMWA RLLSSTNQPS FLGPKDVFDN KEKPMSALLD DGNCNGVVDV PPVTKEITK

Arabidopsis Description

PFK3ATP-dependent 6-phosphofructokinase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q94AA4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.