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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • cytosol 5
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, mitochondrion
BaCelLo:cytosol
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
 endoplasmic reticulum: 27224218
mitochondrion: 27780359
endoplasmic reticulum: 28499913
msms PMID: 27780359 doi
G Mustafa, S Komatsu
Graduate School of Life and Environmental Science, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH52812 Soybean endoplasmic reticulum 96.66 90.28
Solyc12g095880.1.1 Tomato cytosol 79.17 83.09
Bra011387.1-P Field mustard cytosol 75.05 82.51
CDX68896 Canola cytosol 74.85 82.29
CDX75291 Canola cytosol 74.85 82.29
VIT_04s0008g00520.t01 Wine grape cytosol 78.59 81.97
AT4G32840.1 Thale cress cytosol 73.67 81.17
GSMUA_Achr2P16600_001 Banana cytosol 77.6 80.61
KRH60181 Soybean cytosol, nucleus 74.26 80.25
GSMUA_Achr7P13640_001 Banana cytosol 76.03 79.63
KRH41464 Soybean cytosol 73.87 79.49
GSMUA_Achr4P08240_001 Banana cytosol 72.89 79.1
PGSC0003DMT400065447 Potato cytosol 75.05 78.93
GSMUA_Achr1P04940_001 Banana cytosol 74.66 78.67
KRH47193 Soybean cytosol 71.32 78.23
KRH44258 Soybean cytosol 69.35 77.07
Solyc08g066100.2.1 Tomato cytosol 74.85 76.2
KRH23377 Soybean cytosol 71.12 75.26
KRH49011 Soybean endoplasmic reticulum 77.21 73.32
KRH74196 Soybean endoplasmic reticulum 77.41 73.1
GSMUA_Achr4P01040_001 Banana cytosol 76.23 71.59
KRH09958 Soybean nucleus 70.53 68.77
GSMUA_Achr4P15420_001 Banana cytosol 48.33 68.14
GSMUA_Achr7P10770_001 Banana cytosol 61.89 65.22
KRH34610 Soybean plastid 65.23 63.6
Os05t0524400-01 Rice nucleus 69.16 62.08
TraesCS1B01G357000.1 Wheat cytosol 68.37 61.48
TraesCS1A01G344000.1 Wheat nucleus 68.57 61.34
TraesCS1D01G346200.1 Wheat golgi 68.37 61.16
Zm00001d038775_P002 Maize extracellular 68.76 60.87
TraesCS3B01G311900.2 Wheat cytosol 69.16 55.7
HORVU1Hr1G075550.1 Barley plastid 68.96 54.93
HORVU3Hr1G070300.3 Barley cytosol, plastid 69.16 53.58
KRH51223 Soybean endoplasmic reticulum, nucleus 45.97 50.98
Zm00001d043563_P002 Maize cytosol, extracellular 69.94 46.6
TraesCS3A01G277700.1 Wheat cytosol 69.74 46.28
OQU87495 Sorghum cytosol 70.53 45.97
TraesCS3D01G278000.1 Wheat cytosol 69.74 45.75
KRH55292 Soybean extracellular 7.07 43.37
KRG99447 Soybean nucleus, plastid 43.03 41.01
KRH45569 Soybean plastid 42.44 40.6
KRG92178 Soybean cytosol, plastid 25.93 39.76
KRH74511 Soybean plastid 42.04 38.63
OQU78332 Sorghum mitochondrion 68.96 32.23
KRH69652 Soybean plastid 21.61 27.09
Protein Annotations
KEGG:00010+2.7.1.11KEGG:00030+2.7.1.11KEGG:00051+2.7.1.11KEGG:00052+2.7.1.11KEGG:00680+2.7.1.11EntrezGene:100818755
MapMan:2.1.1.1.1Gene3D:3.40.50.450EMBL:ACUP02002219InterPro:ATP_PFKncoils:CoilEnsemblPlantsGene:GLYMA_04G086900
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0003872GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005975GO:GO:0006002
GO:GO:0006091GO:GO:0006096GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009058GO:GO:0009987GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0046872
GO:GO:0061615UniProt:I1JUY7EnsemblPlants:KRH62114ProteinID:KRH62114ProteinID:KRH62114.1HAMAP:MF_01981
PFAM:PF00365PIRSF:PIRSF000534InterPro:PKF_sfPRINTS:PR00476PANTHER:PTHR13697PANTHER:PTHR13697:SF31
MetaCyc:PWY-1042MetaCyc:PWY-1861MetaCyc:PWY-5484MetaCyc:PWY-7385InterPro:Phosphofructokinase_domInterPro:PyroP-dep_PFK_TP0108
SUPFAM:SSF53784UniParc:UPI0001BA4872::::
Description
hypothetical protein
Coordinates
chr4:+:7407720..7415707
Molecular Weight (calculated)
56059.9 Da
IEP (calculated)
6.791
GRAVY (calculated)
-0.368
Length
509 amino acids
Sequence
(BLAST)
001: MPSNDSDSPM KIVHGDAGYI LEDVPHFTDY IPNLPTYPNP LRSNPAYSVV KQYFVHMDDT VPQKVVVHKD SPRGIHFRRA GPRQKVYFKS DEVHACIVTC
101: GGLCPGLNTV IREIVCGLSY MYGVNKVLGI DGGYRGFYSK NTITLTPKVV NDIHKRGGTI LGTSRGGHDT GKIVDSIQDR GINQVYIIGG DGTQRGATVI
201: YEEVRRRGLK VAIAGIPKTI DNDIPVIDKS FGFDTAVEEA QRAINAAHVE AESIENGIGV VKLMGRYSGF IAMYATLASR DVDCCLIPES PFYLEGKGGL
301: FEFIQKRLKE NGHMVIVIAE GAGQDLLTES MQAMDQKDAS GNKLLQDVGL WISHKIKDHF ARKDKIPINL KYIDPTYMIR AIQSNASDNV YCTLLAQSAV
401: HGAMAGYTGF TVGLVNGRHT YIPFNRINER QNKVVITDRM WARLLSSTNQ PSFLSPKDLE EAKKAEQPPT ELLEGNNCND VGDAGKEEQP PKDEQESGNH
501: ADNGIKTEN
Best Arabidopsis Sequence Match ( AT4G26270.1 )
(BLAST)
001: MSTVESSKPK IINGSCGYVL EDVPHLSDYL PGLPTYPNPL QDNPAYSVVK QYFVDADDSV PQKIVVHKDG PRGIHFRRAG PRQKVYFESD EVHACIVTCG
101: GLCPGLNTVI REIVSSLSYM YGVKRILGID GGYRGFYAKN TVSLDSKVVN DIHKRGGTIL GTSRGGHDTT KIVDSIQDRG INQVYIIGGD GTQRGASVIF
201: EEIRRRGLKV AVIGIPKTID NDIPVIDKSF GFDTAVEEAQ RAINAAHVEA ESIENGIGVV KLMGRYSGFI AMYATLASRD VDCCLIPESP FYLEGEGGLF
301: EYIEKRLKES GHMVLVIAEG AGQDLMSKSM ESMTLKDASG NKLLKDVGLW LSQSIKDHFN QKKMVMNLKY IDPTYMIRAV PSNASDNVYC TLLAQSAVHG
401: AMAGYTGYIS GLVNGRQTYI PFYRITEKQN HVVITDRMWA RLLSSTNQPS FLGPKDVFDN KEKPMSALLD DGNCNGVVDV PPVTKEITK
Arabidopsis Description
PFK3ATP-dependent 6-phosphofructokinase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q94AA4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.