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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:cytoskeleton, cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
 golgi: 25769308
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G199500.1
TraesCS1A01G344000.1
TraesCS1B01G214400.2
TraesCS1B01G357000.1
TraesCS1D01G203200.1
TraesCS1D01G346200.1
TraesCS3A01G277700.1
TraesCS3B01G311900.2
TraesCS3D01G278000.1
TraesCS4A01G113900.1
TraesCS4B01G190200.1
TraesCS4B01G346600.2
TraesCS4D01G191600.1
TraesCS4D01G341600.2
TraesCS5A01G515400.1
TraesCS7D01G441700.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G26270.1 TraesCS1A01G199500.1 AT3G57870.1 21798944
AT4G26270.1 TraesCS1B01G214400.2 AT3G57870.1 21798944
AT4G26270.1 TraesCS1D01G203200.1 AT3G57870.1 21798944
AT4G26270.1 TraesCS4B01G346600.2 AT3G57870.1 21798944
AT4G26270.1 TraesCS4D01G341600.2 AT3G57870.1 21798944
AT4G26270.1 TraesCS5A01G515400.1 AT3G57870.1 21798944
AT4G29220.1 TraesCS4A01G113900.1 AT1G13520.1 21798944
AT4G29220.1 TraesCS4B01G190200.1 AT1G13520.1 21798944
AT4G29220.1 TraesCS4D01G191600.1 AT1G13520.1 21798944
AT4G29220.1 TraesCS7D01G441700.1 AT1G13520.1 21798944
AT4G29220.1 TraesCS1A01G199500.1 AT3G57870.1 21798944
AT4G29220.1 TraesCS1B01G214400.2 AT3G57870.1 21798944
AT4G29220.1 TraesCS1D01G203200.1 AT3G57870.1 21798944
AT4G29220.1 TraesCS4B01G346600.2 AT3G57870.1 21798944
AT4G29220.1 TraesCS4D01G341600.2 AT3G57870.1 21798944
AT4G29220.1 TraesCS5A01G515400.1 AT3G57870.1 21798944
AT4G29220.1 TraesCS1A01G344000.1 AT4G29220.1 21798944
AT4G29220.1 TraesCS1B01G357000.1 AT4G29220.1 21798944
AT4G29220.1 TraesCS1D01G346200.1 AT4G29220.1 21798944
AT4G29220.1 TraesCS3A01G277700.1 AT4G29220.1 21798944
AT4G29220.1 TraesCS3B01G311900.2 AT4G29220.1 21798944
AT4G29220.1 TraesCS3D01G278000.1 AT4G29220.1 21798944
AT5G56630.1 TraesCS4A01G113900.1 AT1G13520.1 21798944
AT5G56630.1 TraesCS4B01G190200.1 AT1G13520.1 21798944
AT5G56630.1 TraesCS4D01G191600.1 AT1G13520.1 21798944
AT5G56630.1 TraesCS7D01G441700.1 AT1G13520.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1A01G344000.1 Wheat nucleus 98.42 98.42
TraesCS1B01G357000.1 Wheat cytosol 97.19 97.7
Os05t0524400-01 Rice nucleus 86.99 87.3
Zm00001d038775_P002 Maize extracellular 86.12 85.22
HORVU1Hr1G075550.1 Barley plastid 93.32 83.1
GSMUA_Achr4P08240_001 Banana cytosol 61.51 74.63
GSMUA_Achr1P04940_001 Banana cytosol 62.57 73.71
Bra011387.1-P Field mustard cytosol 59.05 72.57
CDX68896 Canola cytosol 59.05 72.57
CDX75291 Canola cytosol 59.05 72.57
CDY48604 Canola cytosol 59.75 71.88
AT4G32840.1 Thale cress cytosol 58.17 71.64
KRH60181 Soybean cytosol, nucleus 58.88 71.13
VIT_11s0016g02850.t01 Wine grape cytosol 61.16 70.88
CDY06829 Canola cytosol 59.58 70.77
AT4G29220.1 Thale cress cytosol 58.7 70.61
Solyc12g095880.1.1 Tomato cytosol 60.11 70.52
VIT_04s0008g00520.t01 Wine grape cytosol 60.46 70.49
KRH41464 Soybean cytosol 58.52 70.4
CDY69051 Canola cytosol 58.88 70.23
CDY20715 Canola cytosol 60.11 69.8
AT5G56630.1 Thale cress cytosol 59.4 69.69
CDY41800 Canola cytosol 59.4 69.69
CDY11911 Canola cytosol 58.52 69.67
KRH44258 Soybean cytosol 56.06 69.65
KRH47193 Soybean cytosol 56.59 69.4
AT4G26270.1 Thale cress cytosol 59.58 69.33
Solyc07g045160.2.1 Tomato cytosol 59.58 69.18
CDY32769 Canola cytosol 44.82 69.11
Bra006864.1-P Field mustard cytosol 58.88 69.07
Bra002801.1-P Field mustard cytosol 59.23 69.06
CDY32873 Canola cytosol 59.23 69.06
Bra026452.1-P Field mustard cytosol 59.4 68.98
CDX88580 Canola cytosol 58.7 68.87
CDX94352 Canola cytosol 59.05 68.71
CDX89351 Canola cytosol 59.05 68.71
PGSC0003DMT400070848 Potato cytosol 56.41 68.59
KRH62114 Soybean endoplasmic reticulum 61.16 68.37
PGSC0003DMT400065447 Potato cytosol 58.0 68.18
PGSC0003DMT400044886 Potato cytosol 59.93 67.66
KRH23377 Soybean cytosol 56.59 66.94
Solyc08g066100.2.1 Tomato cytosol 58.52 66.6
TraesCS3D01G109600.1 Wheat cytosol 62.21 66.42
GSMUA_Achr4P01040_001 Banana cytosol 62.57 65.68
Bra011089.1-P Field mustard cytosol, plastid 60.46 64.42
KRH52812 Soybean endoplasmic reticulum 61.69 64.4
Solyc04g072580.1.1 Tomato cytosol 55.89 63.73
CDY02131 Canola plastid 59.58 63.72
CDY23054 Canola plastid 59.4 63.53
GSMUA_Achr4P15420_001 Banana cytosol 40.25 63.43
KRH74196 Soybean endoplasmic reticulum 59.93 63.27
KRH49011 Soybean endoplasmic reticulum 59.58 63.25
Bra012940.1-P Field mustard plastid 59.05 63.16
AT5G61580.1 Thale cress plastid 58.52 62.83
TraesCS7D01G101300.1 Wheat cytosol, plastid 61.16 62.82
VIT_16s0013g01140.t01 Wine grape plastid 58.17 62.1
KRH34610 Soybean plastid 56.94 62.07
KRH09958 Soybean nucleus 56.24 61.3
PGSC0003DMT400095815 Potato cytosol 16.7 60.9
Solyc03g093520.2.1 Tomato plastid 56.06 59.18
TraesCS3D01G278000.1 Wheat cytosol 79.61 58.38
CDY65216 Canola cytosol, mitochondrion 5.27 47.62
TraesCS2D01G331200.1 Wheat cytosol 38.66 46.91
OQU78332 Sorghum mitochondrion 86.47 45.18
KRH55292 Soybean extracellular 6.15 42.17
TraesCS5D01G234000.1 Wheat plastid 38.14 41.02
TraesCS5D01G104900.1 Wheat plastid 37.79 40.87
TraesCS7D01G083200.1 Wheat plastid 37.61 40.45
KRG92178 Soybean cytosol, plastid 22.14 37.95
Bra033014.1-P Field mustard cytosol 10.19 37.91
CDY72240 Canola cytosol 10.19 37.91
CDY68743 Canola cytosol, plastid 9.67 37.41
CDY03977 Canola cytosol 10.72 35.26
CDX93710 Canola mitochondrion 9.67 33.54
CDX99958 Canola plastid 8.96 33.12
CDY07887 Canola extracellular, plasma membrane 11.78 27.69
Protein Annotations
KEGG:00010+2.7.1.11KEGG:00030+2.7.1.11KEGG:00051+2.7.1.11KEGG:00052+2.7.1.11KEGG:00680+2.7.1.11MapMan:2.1.1.1.1
Gene3D:3.40.50.450InterPro:ATP_PFKGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0003872
GO:GO:0005488GO:GO:0005524GO:GO:0005975GO:GO:0006002GO:GO:0006091GO:GO:0006096
GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009058GO:GO:0009987
GO:GO:0016301GO:GO:0016740HAMAP:MF_01981PFAM:PF00365PIRSF:PIRSF000534InterPro:PKF_sf
PRINTS:PR00476PANTHER:PTHR13697PANTHER:PTHR13697:SF28InterPro:Phosphofructokinase_domInterPro:PyroP-dep_PFK_TP0108SUPFAM:SSF53784
EnsemblPlantsGene:TraesCS1D01G346200EnsemblPlants:TraesCS1D01G346200.1SEG:seg:::
Description
No Description!
Coordinates
chr1D:+:433911554..433916532
Molecular Weight (calculated)
62290.8 Da
IEP (calculated)
7.049
GRAVY (calculated)
-0.382
Length
569 amino acids
Sequence
(BLAST)
001: MASHIILPPD GDDDEQQRRE DEENDGGGSG SGGDGEQQQQ GGGNAKAAVP FSAMCVRISR DSYPNLRALR NASHASLTDA AYVKISEGDF GYVLDDVPHL
101: ADYIPDVPTY PNPLQDHPAY STVKQYFVDE DDTVPQKVVV QKNSRRGVHF RRAGPRQRVN FESDEVKACI VSCGGLCPGL NTVIRELVCG LAHMYNVNNI
201: FGIQNGYKGF YSSNYVAITP KTVNDIHKRG GTVLGTSRGG HDTKKIVDNI QDRGINQVYI IGGDGTQKGA YEIYKEIRKR GLKVAVAGVP KTIDNDIAII
301: DKSFGFDSAV EEAQRAINSA HVEACSAENG IGLVKLMGRY SGFIAMYATL ASRDVDCCLI PESPFYMDGE GGLLQYVERR LKENKHMVIV VAEGAGQDII
401: AKSIPASDQL DASGNKLLLD IGLWLTHKIK DHFKSKKMEM TIKYIDPTYM IRAIPSNAAD NVYCTLLAHS AIHGAMAGYS FTVGMVNGRH AYIPFYRVTS
501: TRNKVKITDR MWARLLSSTN QPSFLRQKDI DEAREADRLT NKPPLPPVAN QNVAKAFDQS ASASSNGEI
Best Arabidopsis Sequence Match ( AT4G26270.1 )
(BLAST)
001: MSTVESSKPK IINGSCGYVL EDVPHLSDYL PGLPTYPNPL QDNPAYSVVK QYFVDADDSV PQKIVVHKDG PRGIHFRRAG PRQKVYFESD EVHACIVTCG
101: GLCPGLNTVI REIVSSLSYM YGVKRILGID GGYRGFYAKN TVSLDSKVVN DIHKRGGTIL GTSRGGHDTT KIVDSIQDRG INQVYIIGGD GTQRGASVIF
201: EEIRRRGLKV AVIGIPKTID NDIPVIDKSF GFDTAVEEAQ RAINAAHVEA ESIENGIGVV KLMGRYSGFI AMYATLASRD VDCCLIPESP FYLEGEGGLF
301: EYIEKRLKES GHMVLVIAEG AGQDLMSKSM ESMTLKDASG NKLLKDVGLW LSQSIKDHFN QKKMVMNLKY IDPTYMIRAV PSNASDNVYC TLLAQSAVHG
401: AMAGYTGYIS GLVNGRQTYI PFYRITEKQN HVVITDRMWA RLLSSTNQPS FLGPKDVFDN KEKPMSALLD DGNCNGVVDV PPVTKEITK
Arabidopsis Description
PFK3ATP-dependent 6-phosphofructokinase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q94AA4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.