Factsheet for VIT_11s0016g02850.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_01s0011g02320.t01
VIT_01s0011g02330.t01
VIT_07s0031g00160.t01
VIT_11s0016g02850.t01
VIT_18s0001g10100.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G26270.1	VIT_07s0031g00160.t01	AT3G57870.1	21798944
AT4G26270.1	VIT_18s0001g10100.t01	AT3G57870.1	21798944
AT4G29220.1	VIT_01s0011g02320.t01	AT1G13520.1	21798944
AT4G29220.1	VIT_01s0011g02330.t01	AT1G13520.1	21798944
AT4G29220.1	VIT_07s0031g00160.t01	AT3G57870.1	21798944
AT4G29220.1	VIT_18s0001g10100.t01	AT3G57870.1	21798944
AT4G29220.1	VIT_11s0016g02850.t01	AT4G29220.1	21798944
AT5G56630.1	VIT_01s0011g02320.t01	AT1G13520.1	21798944
AT5G56630.1	VIT_01s0011g02330.t01	AT1G13520.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0008g00520.t01	Wine grape	cytosol	82.08	82.58
GSMUA_Achr4P08240_001	Banana	cytosol	78.0	81.66
KRH60181	Soybean	cytosol, nucleus	78.0	81.32
GSMUA_Achr7P13640_001	Banana	cytosol	80.45	81.28
GSMUA_Achr2P16600_001	Banana	cytosol	81.06	81.22
CDY69051	Canola	cytosol	78.41	80.71
KRH41464	Soybean	cytosol	77.6	80.55
Bra026452.1-P	Field mustard	cytosol	80.04	80.2
CDX89351	Canola	cytosol	79.84	80.16
CDX94352	Canola	cytosol	79.84	80.16
AT4G26270.1	Thale cress	cytosol	79.63	79.96
CDY48604	Canola	cytosol	76.99	79.92
Solyc07g045160.2.1	Tomato	cytosol	79.63	79.8
CDY32769	Canola	cytosol	59.88	79.67
Bra002801.1-P	Field mustard	cytosol	79.02	79.51
CDY32873	Canola	cytosol	79.02	79.51
CDY06829	Canola	cytosol	76.58	78.5
AT4G29220.1	Thale cress	cytosol	75.56	78.44
CDY20715	Canola	cytosol	78.21	78.37
CDY41800	Canola	cytosol	77.39	78.35
GSMUA_Achr1P04940_001	Banana	cytosol	76.99	78.26
AT5G56630.1	Thale cress	cytosol	77.19	78.14
CDY11911	Canola	cytosol	75.56	77.62
PGSC0003DMT400070848	Potato	cytosol	73.93	77.56
PGSC0003DMT400044886	Potato	cytosol	79.23	77.18
Bra006864.1-P	Field mustard	cytosol	76.17	77.11
CDX88580	Canola	cytosol	75.76	76.7
KRH49011	Soybean	endoplasmic reticulum	80.04	73.32
KRH74196	Soybean	endoplasmic reticulum	79.63	72.54
Solyc04g072580.1.1	Tomato	cytosol	73.12	71.94
PGSC0003DMT400095815	Potato	cytosol	22.61	71.15
Bra011089.1-P	Field mustard	cytosol, plastid	76.99	70.79
GSMUA_Achr4P01040_001	Banana	cytosol	76.78	69.56
GSMUA_Achr4P15420_001	Banana	cytosol	49.9	67.87
GSMUA_Achr7P10770_001	Banana	cytosol	66.19	67.29
VIT_16s0013g01140.t01	Wine grape	plastid	69.45	63.98
Os05t0524400-01	Rice	nucleus	71.69	62.08
TraesCS1B01G357000.1	Wheat	cytosol	71.28	61.84
TraesCS1A01G344000.1	Wheat	nucleus	71.28	61.51
TraesCS1D01G346200.1	Wheat	golgi	70.88	61.16
Zm00001d038775_P002	Maize	extracellular	70.47	60.17
CDY65216	Canola	cytosol, mitochondrion	7.13	55.56
TraesCS3B01G311900.2	Wheat	cytosol	71.49	55.54
HORVU1Hr1G075550.1	Barley	plastid	71.28	54.77
HORVU3Hr1G070300.3	Barley	cytosol, plastid	72.1	53.88
VIT_00s0780g00010.t01	Wine grape	cytosol	48.07	50.97
TraesCS3A01G277700.1	Wheat	cytosol	71.89	46.02
Zm00001d043563_P002	Maize	cytosol, extracellular	71.28	45.81
TraesCS3D01G278000.1	Wheat	cytosol	72.1	45.62
OQU87495	Sorghum	cytosol	72.3	45.45
VIT_14s0108g00540.t01	Wine grape	cytosol	43.79	44.79
KRH55292	Soybean	extracellular	7.13	42.17
VIT_00s0199g00240.t01	Wine grape	cytosol	38.29	39.92
CDY72240	Canola	cytosol	12.42	39.87
Bra033014.1-P	Field mustard	cytosol	12.42	39.87
CDY68743	Canola	cytosol, plastid	11.81	39.46
KRG92178	Soybean	cytosol, plastid	26.27	38.86
CDY03977	Canola	cytosol	13.44	38.15
VIT_00s0199g00220.t01	Wine grape	plastid	39.31	36.97
CDX93710	Canola	mitochondrion	12.22	36.59
CDX99958	Canola	plastid	10.79	34.42
OQU78332	Sorghum	mitochondrion	70.67	31.86
CDY07887	Canola	extracellular, plasma membrane	14.05	28.51

Protein Annotations

KEGG:00010+2.7.1.11	KEGG:00030+2.7.1.11	KEGG:00051+2.7.1.11	KEGG:00052+2.7.1.11	KEGG:00680+2.7.1.11	EntrezGene:100243946
wikigene:100243946	MapMan:2.1.1.1.1	Gene3D:3.40.50.450	InterPro:ATP_PFK	ProteinID:CBI27972	ProteinID:CBI27972.3
UniProt:D7TBD7	EMBL:FN595756	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003872
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005975	GO:GO:0006002	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0046872	GO:GO:0061615	EntrezGene:LOC100243946	wikigene:LOC100243946	HAMAP:MF_01981
PFAM:PF00365	PIRSF:PIRSF000534	InterPro:PKF_sf	PRINTS:PR00476	PANTHER:PTHR13697	PANTHER:PTHR13697:SF31
InterPro:Phosphofructokinase_dom	InterPro:PyroP-dep_PFK_TP0108	SUPFAM:SSF53784	TIGR:TC60515	UniParc:UPI00015C8D3E	ArrayExpress:VIT_11s0016g02850
EnsemblPlantsGene:VIT_11s0016g02850	EnsemblPlants:VIT_11s0016g02850.t01	unigene:Vvi.3054	RefSeq:XP_002283274	RefSeq:XP_002283274.1	:

Description

ATP-dependent 6-phosphofructokinase [Source:UniProtKB/TrEMBL;Acc:D7TBD7]

Coordinates

chr11:-:2299184..2306317

Molecular Weight (calculated)

53945.2 Da

IEP (calculated)

6.449

GRAVY (calculated)

-0.255

Length

491 amino acids

Sequence
(BLAST)

001: MGTFGNAQPK IVTGDAGYVL EDVPHLADYI PDLPTYHNPL QDNPAYSVVK QYFVNDDDSV AQKIVVHKSS PRGTHFRRAG PRQKVYFESD EVHACIVTCG
101: GLCPGLNTVI REIVCGLNYM YGVNRVLGIA GGYRGFYSRN TTSLTPKVVN DIHKRGGTIL GTSRGGHDTS KIVDSIQDRG INQVYIIGGD GTQKGASVIF
201: EEIQRRGLKV AVAGIPKTID NDIPVIDKSF GFDTAVEEAQ RAINAAHVES ESIENCIGVV KLMGRYSGFI AMHATLASRD VDCCLIPESP FYLEGPGGLF
301: EYIEKRLKEN GHMVIVMAEG AGQELLSESM RYADKQDASG NKLLQDVGLW ISQKIRDHFS TSKRMGITLK YIDPTYMIRA VPSNASDNVY CTLLAQSAVH
401: GAMAGYTGFT VGPVNGRHSY IPFYRIIERQ NKVVITDRMW ARLLSSTNQP SFLSPEDIIE DKKEEAPQSQ LLNGESGRDD EAFEKVISNA C

Best Arabidopsis Sequence Match ( AT4G26270.1 )
(BLAST)

001: MSTVESSKPK IINGSCGYVL EDVPHLSDYL PGLPTYPNPL QDNPAYSVVK QYFVDADDSV PQKIVVHKDG PRGIHFRRAG PRQKVYFESD EVHACIVTCG
101: GLCPGLNTVI REIVSSLSYM YGVKRILGID GGYRGFYAKN TVSLDSKVVN DIHKRGGTIL GTSRGGHDTT KIVDSIQDRG INQVYIIGGD GTQRGASVIF
201: EEIRRRGLKV AVIGIPKTID NDIPVIDKSF GFDTAVEEAQ RAINAAHVEA ESIENGIGVV KLMGRYSGFI AMYATLASRD VDCCLIPESP FYLEGEGGLF
301: EYIEKRLKES GHMVLVIAEG AGQDLMSKSM ESMTLKDASG NKLLKDVGLW LSQSIKDHFN QKKMVMNLKY IDPTYMIRAV PSNASDNVYC TLLAQSAVHG
401: AMAGYTGYIS GLVNGRQTYI PFYRITEKQN HVVITDRMWA RLLSSTNQPS FLGPKDVFDN KEKPMSALLD DGNCNGVVDV PPVTKEITK

Arabidopsis Description

PFK3ATP-dependent 6-phosphofructokinase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q94AA4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.