Factsheet for VIT_00s0780g00010.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_00s0780g00010.t01
VIT_06s0009g01910.t01
VIT_08s0040g00470.t01
VIT_11s0016g02850.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G47810.1	VIT_06s0009g01910.t01	AT2G41090.1	17360592
AT5G47810.1	VIT_08s0040g00470.t01	AT2G41090.1	17360592
AT5G47810.1	VIT_06s0009g01910.t01	AT5G21274.1	17360592
AT5G47810.1	VIT_08s0040g00470.t01	AT5G21274.1	17360592
AT5G47810.1	VIT_00s0780g00010.t01	AT5G47810.1	21798944
AT5G47810.1	VIT_11s0016g02850.t01	AT5G56630.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024914.1-P	Field mustard	cytosol	73.0	76.13
CDY17703	Canola	cytosol	72.79	75.9
CDX77799	Canola	cytosol	72.57	75.68
Solyc04g015200.2.1	Tomato	plastid	73.65	74.78
PGSC0003DMT400050810	Potato	plastid	73.0	74.12
AT5G47810.1	Thale cress	cytosol, mitochondrion	71.06	74.1
GSMUA_Achr5P22470_001	Banana	cytosol	74.95	73.67
HORVU2Hr1G081670.3	Barley	cytosol, golgi, mitochondrion	58.75	73.32
KRH51223	Soybean	endoplasmic reticulum, nucleus	71.92	72.55
GSMUA_Achr9P19740_001	Banana	cytosol	65.23	71.39
Zm00001d020866_P001	Maize	cytosol	21.6	68.03
TraesCS2B01G350500.1	Wheat	cytosol	65.23	64.39
TraesCS2A01G331700.1	Wheat	golgi	65.01	64.18
TraesCS2D01G331200.1	Wheat	cytosol	65.01	64.18
Zm00001d025659_P001	Maize	cytosol, plastid	65.66	63.73
EES12338	Sorghum	cytosol	66.31	63.43
Os09t0479800-01	Rice	cytosol, plasma membrane	63.28	63.01
Os04t0469500-01	Rice	plasma membrane	64.36	61.19
TraesCS4B01G125000.1	Wheat	cytosol	9.5	57.14
KXG26277	Sorghum	cytosol	18.79	55.06
VIT_04s0008g00520.t01	Wine grape	cytosol	51.4	48.77
VIT_11s0016g02850.t01	Wine grape	cytosol	50.97	48.07
VIT_16s0013g01140.t01	Wine grape	plastid	52.48	45.59
VIT_14s0108g00540.t01	Wine grape	cytosol	41.47	40.0
VIT_00s0199g00240.t01	Wine grape	cytosol	37.37	36.73
VIT_00s0199g00220.t01	Wine grape	plastid	39.09	34.67

Protein Annotations

KEGG:00010+2.7.1.11	KEGG:00030+2.7.1.11	KEGG:00051+2.7.1.11	KEGG:00052+2.7.1.11	KEGG:00680+2.7.1.11	EntrezGene:100251605
wikigene:100251605	Gene3D:3.40.50.450	MapMan:35.1	InterPro:ATP_PFK	ProteinID:CCB62919	ProteinID:CCB62919.1
UniProt:F6I7K1	EMBL:FN596807	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003872
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005975	GO:GO:0006002	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0046872	GO:GO:0061615	EntrezGene:LOC100251605	wikigene:LOC100251605	HAMAP:MF_01981
PFAM:PF00365	PIRSF:PIRSF000534	InterPro:PKF_sf	PRINTS:PR00476	PANTHER:PTHR13697	PANTHER:PTHR13697:SF11
InterPro:Phosphofructokinase_dom	InterPro:PyroP-dep_PFK_TP0108	SUPFAM:SSF53784	TIGR:TC52022	UniParc:UPI000210ABF4	ArrayExpress:VIT_00s0780g00010
EnsemblPlantsGene:VIT_00s0780g00010	EnsemblPlants:VIT_00s0780g00010.t01	unigene:Vvi.6692	RefSeq:XP_003635479	RefSeq:XP_003635479.1	:

Description

ATP-dependent 6-phosphofructokinase [Source:UniProtKB/TrEMBL;Acc:F6I7K1]

Coordinates

chrUn:+:35308669..35312232

Molecular Weight (calculated)

51287.5 Da

IEP (calculated)

6.393

GRAVY (calculated)

-0.117

Length

463 amino acids

Sequence
(BLAST)

001: MAAGDDECTA SVGEITISPV KVQRLPHLTH YLPNLKTFPN PLDRNQFYRP SDGFYISPCD VILRQITYDL SGIFPLPPSH LAYHRAGPRK QIFFDPSMIR
101: VAIVTCGGLC PGLNTVIREL VVGLWELYGV RQIYGIIAGY RGFYSFEPMA LNPKLVEDWH KRGGSVLETS RGGFDLEKIV NSIKDHEFDQ VYVIGGDGTM
201: RGAVTIFDEI CRQKLNVSIA GIPKTVDNDI GIIDRSFGFQ TAVEMAQQAI SAAHVEAESA VNGIGLVKLM GRSTGHIALH ATLSSRDVDC CLIPENEFYL
301: EGKGGLFEFL EQRLKQNGHA VLVVAEGAGQ DMIPRSDAQK KETDESGNPV FLDIGRWLKS ELKSWWDRDH PGELVTIKYI DPMYMVRAVP ANATDNLYCT
401: LLAHSAIHGV MAGYTGFVSG PINGNYAYIP IAEVANAKNP VNTMDHKWAW VRSVNNQPDF IKR

Best Arabidopsis Sequence Match ( AT5G47810.1 )
(BLAST)

001: MAAETSIRKL PSLSGLRHRR NPLEDNPYFH PSNGFYITPS DVILAQVAYD HSAHSQSRVA YHRAGPRREI MYEPSAVKAA IVTCGGLCPG MNTVIRELVV
101: GLWELYGVRE IYGIPAGYRG FYSMKAVKLD PKAVHDWHKK GGTVLATSRG GFHLQKIVDA IHLNGYNQVY IIGGDGTMRG AVEIFKEISL RKLEVGITVI
201: PKTVDNDVGI IDRSFGFQTA VEMAQEAISA AHVEAESAVN GIGLVKLMGR STGHIALHAT LSSRDVDCCL IPEMDFYLEG KGGLFEFLEK RLKERGHAVL
301: VVAEGAGQEM IPRNESQKQE RDESGNAVFL DVGVWFKSVL KAWWEREHPD ELFTVKYIDP TYMIRAVPAN ATDNLYCTLL AHSAIHGVMA GYTGFVPGPI
401: NGNYAYIPLE EVAQTKNQVN TRDHKWAWVR SVTNQPDFET NVKG

Arabidopsis Description

PFK2ATP-dependent 6-phosphofructokinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIK0]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.