Factsheet for PGSC0003DMT400050810

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400014123
PGSC0003DMT400018569
PGSC0003DMT400044886
PGSC0003DMT400046278
PGSC0003DMT400050810
PGSC0003DMT400054299
PGSC0003DMT400058435
PGSC0003DMT400070437
PGSC0003DMT400070848
PGSC0003DMT400095815
PGSC0003DMT400097662

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G47810.1	PGSC0003DMT400014123	AT2G41090.1	17360592
AT5G47810.1	PGSC0003DMT400018569	AT2G41090.1	17360592
AT5G47810.1	PGSC0003DMT400046278	AT2G41090.1	17360592
AT5G47810.1	PGSC0003DMT400054299	AT2G41090.1	17360592
AT5G47810.1	PGSC0003DMT400058435	AT2G41090.1	17360592
AT5G47810.1	PGSC0003DMT400070437	AT2G41090.1	17360592
AT5G47810.1	PGSC0003DMT400097662	AT2G41090.1	17360592
AT5G47810.1	PGSC0003DMT400014123	AT5G21274.1	17360592
AT5G47810.1	PGSC0003DMT400018569	AT5G21274.1	17360592
AT5G47810.1	PGSC0003DMT400046278	AT5G21274.1	17360592
AT5G47810.1	PGSC0003DMT400054299	AT5G21274.1	17360592
AT5G47810.1	PGSC0003DMT400058435	AT5G21274.1	17360592
AT5G47810.1	PGSC0003DMT400070437	AT5G21274.1	17360592
AT5G47810.1	PGSC0003DMT400097662	AT5G21274.1	17360592
AT5G47810.1	PGSC0003DMT400050810	AT5G47810.1	21798944
AT5G47810.1	PGSC0003DMT400044886	AT5G56630.1	21798944
AT5G47810.1	PGSC0003DMT400070848	AT5G56630.1	21798944
AT5G47810.1	PGSC0003DMT400095815	AT5G56630.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g015200.2.1	Tomato	plastid	98.25	98.25
HORVU2Hr1G081670.3	Barley	cytosol, golgi, mitochondrion	62.28	76.55
CDY17703	Canola	cytosol	73.46	75.45
Bra024914.1-P	Field mustard	cytosol	73.25	75.23
CDX77799	Canola	cytosol	73.25	75.23
KRH51223	Soybean	endoplasmic reticulum, nucleus	74.78	74.29
AT5G47810.1	Thale cress	cytosol, mitochondrion	71.93	73.87
VIT_00s0780g00010.t01	Wine grape	cytosol	74.12	73.0
GSMUA_Achr5P22470_001	Banana	cytosol	74.34	71.97
TraesCS2B01G350500.1	Wheat	cytosol	68.86	66.95
TraesCS2D01G331200.1	Wheat	cytosol	68.64	66.74
GSMUA_Achr9P19740_001	Banana	cytosol	61.84	66.67
Zm00001d020866_P001	Maize	cytosol	21.49	66.67
TraesCS2A01G331700.1	Wheat	golgi	68.42	66.52
Zm00001d025659_P001	Maize	cytosol, plastid	67.76	64.78
EES12338	Sorghum	cytosol	68.64	64.67
Os09t0479800-01	Rice	cytosol, plasma membrane	64.25	63.01
Os04t0469500-01	Rice	plasma membrane	66.01	61.81
TraesCS4B01G125000.1	Wheat	cytosol	10.09	59.74
KXG26277	Sorghum	cytosol	18.64	53.8
PGSC0003DMT400070848	Potato	cytosol	50.66	49.36
PGSC0003DMT400065447	Potato	cytosol	51.54	48.55
PGSC0003DMT400044886	Potato	cytosol	53.07	48.02
PGSC0003DMT400095815	Potato	cytosol	14.47	42.31
PGSC0003DMT400041788	Potato	cytosol, plastid	42.54	36.47
PGSC0003DMT400060752	Potato	cytosol, plastid	42.11	35.75

Protein Annotations

KEGG:00010+2.7.1.11	KEGG:00030+2.7.1.11	KEGG:00051+2.7.1.11	KEGG:00052+2.7.1.11	KEGG:00680+2.7.1.11	EntrezGene:102593810
Gene3D:3.40.50.450	MapMan:35.1	InterPro:ATP_PFK	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003872	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0005975	GO:GO:0006002	GO:GO:0006091	GO:GO:0006096
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0046872	GO:GO:0061615	UniProt:M1BQX2
HAMAP:MF_01981	PFAM:PF00365	EnsemblPlantsGene:PGSC0003DMG400019734	PGSC:PGSC0003DMG400019734	EnsemblPlants:PGSC0003DMT400050810	PIRSF:PIRSF000534
InterPro:PKF_sf	PRINTS:PR00476	PANTHER:PTHR13697	PANTHER:PTHR13697:SF11	InterPro:Phosphofructokinase_dom	InterPro:PyroP-dep_PFK_TP0108
SUPFAM:SSF53784	UniParc:UPI00029522A8	RefSeq:XP_006350241.1	SEG:seg	:	:

Description

Phosphofructokinase [Source:PGSC_GENE;Acc:PGSC0003DMG400019734]

Coordinates

chr4:-:9352717..9357797

Molecular Weight (calculated)

50525.3 Da

IEP (calculated)

6.676

GRAVY (calculated)

-0.164

Length

456 amino acids

Sequence
(BLAST)

001: MSNSSSTISI SNVQLQHITH LTNYNSQIQT HTNPLAFNPF FRTFPGFFLT SSDIVLRHNV LDLSGTFPSP NPPLAYHRAG PRNQILFDPA TVRAAIVTCG
101: GLCPGMNTVI RELVVGLWEL YGVREIFGIK AGYRGFYSYD PVRLNPKMVD DWHKRGGTVL ETSRGGFDLK KIVDAIQNHG FNQLYIIGGD GTMRGAVEIF
201: EELKQRKLYI SVVGIPKTVD NDVGIIDRSF GFQTAVEMAQ QAINAAHVEA ESAVNGIGLV KLMGRSTGHI ALHATLSSRD VDCCLIPEID FYLEGKGGLF
301: EFLEDQLKEM GHAVLVVAEG AGQDIIPRTE SQKTEKDESG NPVFLDVGGW LKSELKNWWS RDHPNELFTI KYIDPTYMIR AVPPNATDNS YCTLLAHSAI
401: HGVMAGYTGF VCGPINGNYA YIPVDEVAKA KNKVDTRDHK WSWVRSVSNQ PDFIRS

Best Arabidopsis Sequence Match ( AT5G47810.1 )
(BLAST)

001: MAAETSIRKL PSLSGLRHRR NPLEDNPYFH PSNGFYITPS DVILAQVAYD HSAHSQSRVA YHRAGPRREI MYEPSAVKAA IVTCGGLCPG MNTVIRELVV
101: GLWELYGVRE IYGIPAGYRG FYSMKAVKLD PKAVHDWHKK GGTVLATSRG GFHLQKIVDA IHLNGYNQVY IIGGDGTMRG AVEIFKEISL RKLEVGITVI
201: PKTVDNDVGI IDRSFGFQTA VEMAQEAISA AHVEAESAVN GIGLVKLMGR STGHIALHAT LSSRDVDCCL IPEMDFYLEG KGGLFEFLEK RLKERGHAVL
301: VVAEGAGQEM IPRNESQKQE RDESGNAVFL DVGVWFKSVL KAWWEREHPD ELFTVKYIDP TYMIRAVPAN ATDNLYCTLL AHSAIHGVMA GYTGFVPGPI
401: NGNYAYIPLE EVAQTKNQVN TRDHKWAWVR SVTNQPDFET NVKG

Arabidopsis Description

PFK2ATP-dependent 6-phosphofructokinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIK0]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.